RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 MYOZ2Q9NPC6 264 aa17.09■□□□□ 0.33
TRIM3-215ENST00000639856 NYAP2Q9P242 653 aa17.09■□□□□ 0.33
TRIM3-215ENST00000639856 ARFGEF1Q9Y6D6 1849 aa17.09■□□□□ 0.33
TRIM3-215ENST00000639856 NRDCO43847 1150 aa17.09■□□□□ 0.33
TRIM3-215ENST00000639856 E2F4Q16254 413 aa17.09■□□□□ 0.33
TRIM3-215ENST00000639856 IL17AQ16552 155 aa17.09■□□□□ 0.33
TRIM3-215ENST00000639856 NYAP1Q6ZVC0 841 aa17.09■□□□□ 0.33
TRIM3-215ENST00000639856 VSTM4Q8IW00 320 aa17.09■□□□□ 0.33
TRIM3-215ENST00000639856 ADGRF4Q8IZF3 695 aa17.09■□□□□ 0.33
TRIM3-215ENST00000639856 C4orf32Q8N8J7 132 aa17.09■□□□□ 0.33
TRIM3-215ENST00000639856 IQUBQ8NA54 791 aa17.09■□□□□ 0.33
TRIM3-215ENST00000639856 MED15Q96RN5 788 aa17.09■□□□□ 0.33
TRIM3-215ENST00000639856 ZMYND12Q9H0C1 365 aa17.09■□□□□ 0.33
TRIM3-215ENST00000639856 PAXBP1Q9Y5B6 917 aa17.09■□□□□ 0.33
TRIM3-215ENST00000639856 CCDC194A0A1B0GVG4 234 aa17.08■□□□□ 0.33
TRIM3-215ENST00000639856 TRMT44Q8IYL2 757 aaKnown RBP17.08■□□□□ 0.33
TRIM3-215ENST00000639856 MKL1Q969V6 931 aa17.08■□□□□ 0.33
TRIM3-215ENST00000639856 JMJD4Q9H9V9 463 aa17.08■□□□□ 0.33
TRIM3-215ENST00000639856 SMCO2A6NFE2 343 aa17.08■□□□□ 0.32
TRIM3-215ENST00000639856 LONP1P36776 959 aaKnown RBP17.08■□□□□ 0.32
TRIM3-215ENST00000639856 PTPN14Q15678 1187 aa17.08■□□□□ 0.32
TRIM3-215ENST00000639856 RBM26Q5T8P6 1007 aaKnown RBP17.08■□□□□ 0.32
TRIM3-215ENST00000639856 COA7Q96BR5 231 aa17.08■□□□□ 0.32
TRIM3-215ENST00000639856 INTS13Q9NVM9 706 aa17.08■□□□□ 0.32
TRIM3-215ENST00000639856 HERC5Q9UII4 1024 aaKnown RBP17.08■□□□□ 0.32
TRIM3-215ENST00000639856 USP17L10C9JJH3 530 aa17.07■□□□□ 0.32
TRIM3-215ENST00000639856 TMEM232C9JQI7 657 aa17.07■□□□□ 0.32
TRIM3-215ENST00000639856 PPP1R11O60927 126 aaPredicted RBP17.07■□□□□ 0.32
TRIM3-215ENST00000639856 CASP1P29466 404 aa17.07■□□□□ 0.32
TRIM3-215ENST00000639856 TNIP1Q15025 636 aa17.07■□□□□ 0.32
TRIM3-215ENST00000639856 INF2Q27J81 1249 aa17.07■□□□□ 0.32
TRIM3-215ENST00000639856 PPP4R3BQ5MIZ7 849 aa17.07■□□□□ 0.32
TRIM3-215ENST00000639856 CEP135Q66GS9 1140 aa17.07■□□□□ 0.32
TRIM3-215ENST00000639856 MIGA2Q7L4E1 593 aa17.07■□□□□ 0.32
TRIM3-215ENST00000639856 TRMT1Q9NXH9 659 aaKnown RBP17.07■□□□□ 0.32
TRIM3-215ENST00000639856 LTBP3Q9NS15 1303 aa17.07■□□□□ 0.32
TRIM3-215ENST00000639856 CDK11BP21127 795 aaKnown RBP17.06■□□□□ 0.32
TRIM3-215ENST00000639856 SLC1A4P43007 532 aa17.06■□□□□ 0.32
TRIM3-215ENST00000639856 HSP90AA4PQ58FG1 418 aa17.06■□□□□ 0.32
TRIM3-215ENST00000639856 GPATCH4Q5T3I0 446 aaKnown RBP17.06■□□□□ 0.32
TRIM3-215ENST00000639856 E4F1Q66K89 784 aaPredicted RBP17.06■□□□□ 0.32
TRIM3-215ENST00000639856 SLFN13Q68D06 897 aa17.06■□□□□ 0.32
TRIM3-215ENST00000639856 PDXDC2PQ6P474 469 aa17.06■□□□□ 0.32
TRIM3-215ENST00000639856 NUP88Q99567 741 aaPredicted RBP17.06■□□□□ 0.32
TRIM3-215ENST00000639856 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.06■□□□□ 0.32
TRIM3-215ENST00000639856 CUL4BQ13620 913 aa17.06■□□□□ 0.32
TRIM3-215ENST00000639856 FKBP1CQ5VVH2 108 aa17.06■□□□□ 0.32
TRIM3-215ENST00000639856 CCDC12Q8WUD4 166 aaPredicted RBP17.06■□□□□ 0.32
TRIM3-215ENST00000639856 MAP7D2Q96T17 732 aa17.06■□□□□ 0.32
TRIM3-215ENST00000639856 PDCL3Q9H2J4 239 aa17.06■□□□□ 0.32
TRIM3-215ENST00000639856 GJA3Q9Y6H8 435 aa17.06■□□□□ 0.32
TRIM3-215ENST00000639856 A0A1W2PRG0 241 aa17.05■□□□□ 0.32
TRIM3-215ENST00000639856 GMPSP49915 693 aaPredicted RBP17.05■□□□□ 0.32
TRIM3-215ENST00000639856 CCDC112Q8NEF3 446 aa17.05■□□□□ 0.32
TRIM3-215ENST00000639856 C6orf50Q9HD87 102 aa17.05■□□□□ 0.32
TRIM3-215ENST00000639856 SAMSN1Q9NSI8 373 aaKnown RBP17.05■□□□□ 0.32
TRIM3-215ENST00000639856 SRCAPQ6ZRS2 3230 aa17.05■□□□□ 0.32
TRIM3-215ENST00000639856 PNMA6FA0A0J9YX94 578 aa17.05■□□□□ 0.32
TRIM3-215ENST00000639856 F5H6K3 240 aa17.05■□□□□ 0.32
TRIM3-215ENST00000639856 CTIFO43310 598 aaKnown RBP17.05■□□□□ 0.32
TRIM3-215ENST00000639856 CD44P16070 742 aaKnown RBP17.05■□□□□ 0.32
TRIM3-215ENST00000639856 TXLNAP40222 546 aa17.05■□□□□ 0.32
TRIM3-215ENST00000639856 ZNF280AP59817 542 aaPredicted RBP17.05■□□□□ 0.32
TRIM3-215ENST00000639856 KLRC3Q07444 240 aa17.05■□□□□ 0.32
TRIM3-215ENST00000639856 SPATA1Q5VX52 437 aa17.05■□□□□ 0.32
TRIM3-215ENST00000639856 FAM83AQ86UY5 434 aa17.05■□□□□ 0.32
TRIM3-215ENST00000639856 TSC1Q92574 1164 aa17.05■□□□□ 0.32
TRIM3-215ENST00000639856 STAMQ92783 540 aa17.05■□□□□ 0.32
TRIM3-215ENST00000639856 TMX1Q9H3N1 280 aa17.05■□□□□ 0.32
TRIM3-215ENST00000639856 TMEM260Q9NX78 707 aa17.05■□□□□ 0.32
TRIM3-215ENST00000639856 PGAP2Q9UHJ9 254 aa17.05■□□□□ 0.32
TRIM3-215ENST00000639856 ASTN2O75129 1339 aaPredicted RBP17.04■□□□□ 0.32
TRIM3-215ENST00000639856 FZD9O00144 591 aa17.04■□□□□ 0.32
TRIM3-215ENST00000639856 NDUFB10O96000 172 aa17.04■□□□□ 0.32
TRIM3-215ENST00000639856 GNA11P29992 359 aa17.04■□□□□ 0.32
TRIM3-215ENST00000639856 ECE1P42892 770 aa17.04■□□□□ 0.32
TRIM3-215ENST00000639856 DTHD1Q6ZMT9 781 aa17.04■□□□□ 0.32
TRIM3-215ENST00000639856 SAMD7Q7Z3H4 446 aa17.04■□□□□ 0.32
TRIM3-215ENST00000639856 MTERF4Q7Z6M4 381 aaKnown RBP17.04■□□□□ 0.32
TRIM3-215ENST00000639856 MICALL2Q8IY33 904 aa17.04■□□□□ 0.32
TRIM3-215ENST00000639856 DCAF4Q8WV16 495 aa17.04■□□□□ 0.32
TRIM3-215ENST00000639856 BIN2Q9UBW5 565 aaPredicted RBP17.04■□□□□ 0.32
TRIM3-215ENST00000639856 ZNF541Q9H0D2 1346 aa17.04■□□□□ 0.32
TRIM3-215ENST00000639856 SYNRGQ9UMZ2 1314 aa17.04■□□□□ 0.32
TRIM3-215ENST00000639856 ESYT2A0FGR8 921 aa17.03■□□□□ 0.32
TRIM3-215ENST00000639856 PPP1R3GB7ZBB8 358 aa17.03■□□□□ 0.32
TRIM3-215ENST00000639856 KIF2AO00139 706 aaPredicted RBP17.03■□□□□ 0.32
TRIM3-215ENST00000639856 LAD1O00515 517 aa17.03■□□□□ 0.32
TRIM3-215ENST00000639856 GTPBP6O43824 516 aaPredicted RBP17.03■□□□□ 0.32
TRIM3-215ENST00000639856 TBX2Q13207 712 aaPredicted RBP17.03■□□□□ 0.32
TRIM3-215ENST00000639856 JAKMIP3Q5VZ66 844 aa17.03■□□□□ 0.32
TRIM3-215ENST00000639856 GMCL1P1Q8NEA9 526 aa17.03■□□□□ 0.32
TRIM3-215ENST00000639856 MTMR8Q96EF0 704 aa17.03■□□□□ 0.32
TRIM3-215ENST00000639856 MTRQ99707 1265 aa17.03■□□□□ 0.32
TRIM3-215ENST00000639856 hCG_1984214I3L0E3 225 aa17.03■□□□□ 0.32
TRIM3-215ENST00000639856 ZBTB5O15062 677 aa17.03■□□□□ 0.32
TRIM3-215ENST00000639856 KLHL10Q6JEL2 608 aa17.03■□□□□ 0.32
TRIM3-215ENST00000639856 SPICE1Q8N0Z3 855 aa17.03■□□□□ 0.32
TRIM3-215ENST00000639856 REXO1Q8N1G1 1221 aaKnown RBP17.03■□□□□ 0.32
TRIM3-215ENST00000639856 ZNF713Q8N859 430 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms