RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 FOSL2P15408 326 aa6.57□□□□□ -1.36
PDE4D-229ENST00000638939 RAG1P15918 1043 aa6.57□□□□□ -1.36
PDE4D-229ENST00000638939 TAL1P17542 331 aaPredicted RBP6.57□□□□□ -1.36
PDE4D-229ENST00000638939 RASA1P20936 1047 aa6.57□□□□□ -1.36
PDE4D-229ENST00000638939 DNAJB2P25686 324 aa6.57□□□□□ -1.36
PDE4D-229ENST00000638939 ITGB8P26012 769 aa6.57□□□□□ -1.36
PDE4D-229ENST00000638939 ACLYP53396 1101 aa6.57□□□□□ -1.36
PDE4D-229ENST00000638939 OAZ1P54368 228 aa6.57□□□□□ -1.36
PDE4D-229ENST00000638939 FAAP100Q0VG06 881 aa6.57□□□□□ -1.36
PDE4D-229ENST00000638939 SLFNL1Q499Z3 407 aa6.57□□□□□ -1.36
PDE4D-229ENST00000638939 SNRNP48Q6IEG0 339 aaKnown RBP6.57□□□□□ -1.36
PDE4D-229ENST00000638939 CCSAPQ6IQ19 270 aaPredicted RBP6.57□□□□□ -1.36
PDE4D-229ENST00000638939 KLHDC9Q8NEP7 349 aa6.57□□□□□ -1.36
PDE4D-229ENST00000638939 MYLIPQ8WY64 445 aa6.57□□□□□ -1.36
PDE4D-229ENST00000638939 LENG1Q96BZ8 264 aaPredicted RBP6.57□□□□□ -1.36
PDE4D-229ENST00000638939 REPIN1Q9BWE0 567 aaKnown RBP6.57□□□□□ -1.36
PDE4D-229ENST00000638939 LRRCC1Q9C099 1032 aa6.57□□□□□ -1.36
PDE4D-229ENST00000638939 UPF3AQ9H1J1 476 aaKnown RBP6.57□□□□□ -1.36
PDE4D-229ENST00000638939 BOLA2Q9H3K6 86 aa6.57□□□□□ -1.36
PDE4D-229ENST00000638939 CDHR5Q9HBB8 845 aa6.57□□□□□ -1.36
PDE4D-229ENST00000638939 STARD7Q9NQZ5 370 aa6.57□□□□□ -1.36
PDE4D-229ENST00000638939 POLR3EQ9NVU0 708 aa6.57□□□□□ -1.36
PDE4D-229ENST00000638939 NYAP2Q9P242 653 aa6.57□□□□□ -1.36
PDE4D-229ENST00000638939 TBX21Q9UL17 535 aa6.57□□□□□ -1.36
PDE4D-229ENST00000638939 PCDHGA10Q9Y5H3 936 aa6.57□□□□□ -1.36
PDE4D-229ENST00000638939 SLC4A4Q9Y6R1 1079 aa6.57□□□□□ -1.36
PDE4D-229ENST00000638939 TCF20Q9UGU0 1960 aaKnown RBP6.57□□□□□ -1.36
PDE4D-229ENST00000638939 TET1Q8NFU7 2136 aa6.56□□□□□ -1.36
PDE4D-229ENST00000638939 NLRC5Q86WI3 1866 aa6.56□□□□□ -1.36
PDE4D-229ENST00000638939 MICAL3Q7RTP6 2002 aa6.56□□□□□ -1.36
PDE4D-229ENST00000638939 IGKV6D-41A0A0C4DH26 115 aa6.56□□□□□ -1.36
PDE4D-229ENST00000638939 DCDC2CA8MYV0 355 aa6.56□□□□□ -1.36
PDE4D-229ENST00000638939 NDUFB10O96000 172 aa6.56□□□□□ -1.36
PDE4D-229ENST00000638939 TIMP1P01033 207 aa6.56□□□□□ -1.36
PDE4D-229ENST00000638939 CHGBP05060 677 aa6.56□□□□□ -1.36
PDE4D-229ENST00000638939 EPHB4P54760 987 aa6.56□□□□□ -1.36
PDE4D-229ENST00000638939 NKX3-2P78367 333 aa6.56□□□□□ -1.36
PDE4D-229ENST00000638939 CCDC174Q6PII3 467 aa6.56□□□□□ -1.36
PDE4D-229ENST00000638939 KBTBD3Q8NAB2 608 aa6.56□□□□□ -1.36
PDE4D-229ENST00000638939 PRPF38AQ8NAV1 312 aaKnown RBP6.56□□□□□ -1.36
PDE4D-229ENST00000638939 PCSK9Q8NBP7 692 aaKnown RBP6.56□□□□□ -1.36
PDE4D-229ENST00000638939 GMCL1P1Q8NEA9 526 aa6.56□□□□□ -1.36
PDE4D-229ENST00000638939 APPBP2Q92624 585 aa6.56□□□□□ -1.36
PDE4D-229ENST00000638939 ZDHHC16Q969W1 377 aa6.56□□□□□ -1.36
PDE4D-229ENST00000638939 FGD4Q96M96 766 aa6.56□□□□□ -1.36
PDE4D-229ENST00000638939 STRBPQ96SI9 672 aaKnown RBP6.56□□□□□ -1.36
PDE4D-229ENST00000638939 NUP88Q99567 741 aaPredicted RBP6.56□□□□□ -1.36
PDE4D-229ENST00000638939 PUS7LQ9H0K6 701 aaKnown RBP6.56□□□□□ -1.36
PDE4D-229ENST00000638939 ABHD16BQ9H3Z7 469 aa6.56□□□□□ -1.36
PDE4D-229ENST00000638939 SLC38A10Q9HBR0 1119 aa6.56□□□□□ -1.36
PDE4D-229ENST00000638939 ZNF287Q9HBT7 754 aa6.56□□□□□ -1.36
PDE4D-229ENST00000638939 TMEM39AQ9NV64 488 aa6.56□□□□□ -1.36
PDE4D-229ENST00000638939 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.56□□□□□ -1.36
PDE4D-229ENST00000638939 FBXO40Q9UH90 709 aa6.56□□□□□ -1.36
PDE4D-229ENST00000638939 FAM184BQ9ULE4 1060 aa6.56□□□□□ -1.36
PDE4D-229ENST00000638939 PRRC2BQ5JSZ5 2229 aaKnown RBP6.56□□□□□ -1.36
PDE4D-229ENST00000638939 ATG2AQ2TAZ0 1938 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 A0A0U1RQG5 324 aaPredicted RBP6.55□□□□□ -1.36
PDE4D-229ENST00000638939 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.55□□□□□ -1.36
PDE4D-229ENST00000638939 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.55□□□□□ -1.36
PDE4D-229ENST00000638939 MYADML2A6NDP7 307 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 GSG1L2A8MUP6 293 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 F5H6K3 240 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 ADCY6O43306 1168 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 SNAI1O95863 264 aaPredicted RBP6.55□□□□□ -1.36
PDE4D-229ENST00000638939 ZFYP08048 801 aaPredicted RBP6.55□□□□□ -1.36
PDE4D-229ENST00000638939 FDX1P10109 184 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 GNAT2P19087 354 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 RFC5P40937 340 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 CDK7P50613 346 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 GJA9P57773 515 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 KLRC3Q07444 240 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 PPIGQ13427 754 aaKnown RBP eCLIP6.55□□□□□ -1.36
PDE4D-229ENST00000638939 ACVR2BQ13705 512 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 KCNA10Q16322 511 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 RASIP1Q5U651 963 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 MFSD5Q6N075 450 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 PSRC1Q6PGN9 363 aaPredicted RBP6.55□□□□□ -1.36
PDE4D-229ENST00000638939 CHST13Q8NET6 341 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 SYMPKQ92797 1274 aaKnown RBP6.55□□□□□ -1.36
PDE4D-229ENST00000638939 MKL1Q969V6 931 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 DDX11Q96FC9 970 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 CEP95Q96GE4 821 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 GPATCH3Q96I76 525 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 GLT1D1Q96MS3 346 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 KATNBL1Q9H079 304 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 MKNK2Q9HBH9 465 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 SPC25Q9HBM1 224 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 EPB41L4AQ9HCS5 686 aaPredicted RBP6.55□□□□□ -1.36
PDE4D-229ENST00000638939 ECHDC1Q9NTX5 307 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.55□□□□□ -1.36
PDE4D-229ENST00000638939 FEM1BQ9UK73 627 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 ZHX1Q9UKY1 873 aaPredicted RBP6.55□□□□□ -1.36
PDE4D-229ENST00000638939 COG6Q9Y2V7 657 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 RIPK3Q9Y572 518 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 PCDHGA4Q9Y5G9 962 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 ADGRG1Q9Y653 693 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 RALGAPA2Q2PPJ7 1873 aa6.55□□□□□ -1.36
PDE4D-229ENST00000638939 ARVCFO00192 962 aa6.54□□□□□ -1.36
PDE4D-229ENST00000638939 CTAGE5O15320 804 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms