RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 CCDC144CPQ8IYA2 1237 aa25.37■■□□□ 1.65
SCN1B-206ENST00000638536 SLC5A4Q9NY91 659 aa25.37■■□□□ 1.65
SCN1B-206ENST00000638536 BRPF3Q9ULD4 1205 aa25.37■■□□□ 1.65
SCN1B-206ENST00000638536 DDX49Q9Y6V7 483 aaKnown RBP25.37■■□□□ 1.65
SCN1B-206ENST00000638536 DNAH12Q6ZR08 3092 aa25.37■■□□□ 1.65
SCN1B-206ENST00000638536 ASTN1O14525 1302 aa25.37■■□□□ 1.65
SCN1B-206ENST00000638536 WDR19Q8NEZ3 1342 aa25.37■■□□□ 1.65
SCN1B-206ENST00000638536 EPB41L2O43491 1005 aaKnown RBP25.37■■□□□ 1.65
SCN1B-206ENST00000638536 PPP1R11O60927 126 aaPredicted RBP25.37■■□□□ 1.65
SCN1B-206ENST00000638536 DDAH1O94760 285 aa25.37■■□□□ 1.65
SCN1B-206ENST00000638536 SGMS1Q86VZ5 419 aa25.37■■□□□ 1.65
SCN1B-206ENST00000638536 TMTC2Q8N394 836 aa25.37■■□□□ 1.65
SCN1B-206ENST00000638536 MTMR8Q96EF0 704 aa25.37■■□□□ 1.65
SCN1B-206ENST00000638536 DIS3Q9Y2L1 958 aaKnown RBP25.37■■□□□ 1.65
SCN1B-206ENST00000638536 SGPL1O95470 568 aa25.36■■□□□ 1.65
SCN1B-206ENST00000638536 NSMFQ6X4W1 530 aa25.36■■□□□ 1.65
SCN1B-206ENST00000638536 CMTR1Q8N1G2 835 aaKnown RBP25.36■■□□□ 1.65
SCN1B-206ENST00000638536 TINF2Q9BSI4 451 aa25.36■■□□□ 1.65
SCN1B-206ENST00000638536 RIOX1Q9H6W3 641 aa25.36■■□□□ 1.65
SCN1B-206ENST00000638536 CYP39A1Q9NYL5 469 aa25.36■■□□□ 1.65
SCN1B-206ENST00000638536 FRMPD3Q5JV73 1810 aa25.36■■□□□ 1.65
SCN1B-206ENST00000638536 SOWAHBA6NEL2 793 aa25.35■■□□□ 1.65
SCN1B-206ENST00000638536 CYBAP13498 195 aa25.35■■□□□ 1.65
SCN1B-206ENST00000638536 FAM133AQ8N9E0 248 aa25.35■■□□□ 1.65
SCN1B-206ENST00000638536 TBC1D5Q92609 795 aa25.35■■□□□ 1.65
SCN1B-206ENST00000638536 PIGSQ96S52 555 aa25.35■■□□□ 1.65
SCN1B-206ENST00000638536 SLC12A7Q9Y666 1083 aa25.35■■□□□ 1.65
SCN1B-206ENST00000638536 PLEKHA8P1O95397 391 aa25.34■■□□□ 1.65
SCN1B-206ENST00000638536 CASTP20810 708 aaKnown RBP25.34■■□□□ 1.65
SCN1B-206ENST00000638536 HMGB1P09429 215 aaKnown RBP25.34■■□□□ 1.65
SCN1B-206ENST00000638536 BAATQ14032 418 aaPredicted RBP25.34■■□□□ 1.65
SCN1B-206ENST00000638536 LHX8Q68G74 356 aa25.34■■□□□ 1.65
SCN1B-206ENST00000638536 APOA5Q6Q788 366 aa25.34■■□□□ 1.65
SCN1B-206ENST00000638536 BLOC1S2Q6QNY1 142 aa25.34■■□□□ 1.65
SCN1B-206ENST00000638536 Q6ZUG5 572 aa25.34■■□□□ 1.65
SCN1B-206ENST00000638536 MICU3Q86XE3 530 aa25.34■■□□□ 1.65
SCN1B-206ENST00000638536 HOMER1Q86YM7 354 aa25.34■■□□□ 1.65
SCN1B-206ENST00000638536 PIBF1Q8WXW3 757 aa25.34■■□□□ 1.65
SCN1B-206ENST00000638536 MAP3K14Q99558 947 aa25.34■■□□□ 1.65
SCN1B-206ENST00000638536 CRISPLD2Q9H0B8 497 aa25.34■■□□□ 1.65
SCN1B-206ENST00000638536 POTEB2H3BUK9 544 aa25.33■■□□□ 1.65
SCN1B-206ENST00000638536 SNAI1O95863 264 aaPredicted RBP25.33■■□□□ 1.65
SCN1B-206ENST00000638536 RPS6KB1P23443 525 aa25.33■■□□□ 1.65
SCN1B-206ENST00000638536 SLC30A10Q6XR72 485 aa25.33■■□□□ 1.65
SCN1B-206ENST00000638536 SRBD1Q8N5C6 995 aaKnown RBP25.33■■□□□ 1.65
SCN1B-206ENST00000638536 CTCFLQ8NI51 663 aaPredicted RBP25.33■■□□□ 1.65
SCN1B-206ENST00000638536 ZBTB5O15062 677 aa25.32■■□□□ 1.64
SCN1B-206ENST00000638536 CNGA1P29973 690 aa25.32■■□□□ 1.64
SCN1B-206ENST00000638536 FBXO11Q86XK2 927 aa25.32■■□□□ 1.64
SCN1B-206ENST00000638536 PFASO15067 1338 aa25.32■■□□□ 1.64
SCN1B-206ENST00000638536 TFRCP02786 760 aaKnown RBP25.31■■□□□ 1.64
SCN1B-206ENST00000638536 ANO1Q5XXA6 986 aa25.31■■□□□ 1.64
SCN1B-206ENST00000638536 MAMDC4Q6UXC1 1216 aa25.31■■□□□ 1.64
SCN1B-206ENST00000638536 PTPDC1A2A3K4 754 aa25.3■■□□□ 1.64
SCN1B-206ENST00000638536 OPLAHO14841 1288 aa25.3■■□□□ 1.64
SCN1B-206ENST00000638536 APOBRQ0VD83 1088 aa25.3■■□□□ 1.64
SCN1B-206ENST00000638536 C8orf34Q49A92 452 aa25.3■■□□□ 1.64
SCN1B-206ENST00000638536 FANCBQ8NB91 859 aa25.3■■□□□ 1.64
SCN1B-206ENST00000638536 ZSWIM6Q9HCJ5 1215 aa25.3■■□□□ 1.64
SCN1B-206ENST00000638536 KLF18A0A0U1RQI7 1052 aa25.3■■□□□ 1.64
SCN1B-206ENST00000638536 RPS6P62753 249 aaKnown RBP25.3■■□□□ 1.64
SCN1B-206ENST00000638536 ZNF467Q7Z7K2 595 aaPredicted RBP25.3■■□□□ 1.64
SCN1B-206ENST00000638536 CCDC82Q8N4S0 544 aa25.3■■□□□ 1.64
SCN1B-206ENST00000638536 BRF1Q92994 677 aa25.3■■□□□ 1.64
SCN1B-206ENST00000638536 UPF3BQ9BZI7 483 aaKnown RBP25.3■■□□□ 1.64
SCN1B-206ENST00000638536 ZNF865P0CJ78 1059 aaPredicted RBP25.29■■□□□ 1.64
SCN1B-206ENST00000638536 CALML3P27482 149 aa25.29■■□□□ 1.64
SCN1B-206ENST00000638536 PSMA5P28066 241 aa25.29■■□□□ 1.64
SCN1B-206ENST00000638536 KIF5BP33176 963 aa25.29■■□□□ 1.64
SCN1B-206ENST00000638536 MNX1P50219 401 aaPredicted RBP25.29■■□□□ 1.64
SCN1B-206ENST00000638536 MLLT1Q03111 559 aaPredicted RBP25.29■■□□□ 1.64
SCN1B-206ENST00000638536 RNF207Q6ZRF8 634 aa25.29■■□□□ 1.64
SCN1B-206ENST00000638536 RUFY3Q7L099 469 aa25.29■■□□□ 1.64
SCN1B-206ENST00000638536 AMNQ9BXJ7 453 aa25.29■■□□□ 1.64
SCN1B-206ENST00000638536 AGXT2Q9BYV1 514 aa25.29■■□□□ 1.64
SCN1B-206ENST00000638536 FAM217BQ9NTX9 383 aaPredicted RBP25.29■■□□□ 1.64
SCN1B-206ENST00000638536 ABCB11O95342 1321 aa25.29■■□□□ 1.64
SCN1B-206ENST00000638536 hCG_1642624A0A1W2PR95 340 aa25.28■■□□□ 1.64
SCN1B-206ENST00000638536 CALM1P0DP23 149 aa25.28■■□□□ 1.64
SCN1B-206ENST00000638536 CALM2P0DP24 149 aa25.28■■□□□ 1.64
SCN1B-206ENST00000638536 CALM3P0DP25 149 aa25.28■■□□□ 1.64
SCN1B-206ENST00000638536 ARMCX2Q7L311 632 aa25.28■■□□□ 1.64
SCN1B-206ENST00000638536 UBE2Q1Q7Z7E8 422 aa25.28■■□□□ 1.64
SCN1B-206ENST00000638536 SPZ1Q9BXG8 430 aa25.28■■□□□ 1.64
SCN1B-206ENST00000638536 DDX20Q9UHI6 824 aaKnown RBP25.28■■□□□ 1.64
SCN1B-206ENST00000638536 PNMA2Q9UL42 364 aa25.28■■□□□ 1.64
SCN1B-206ENST00000638536 OGDHLQ9ULD0 1010 aa25.28■■□□□ 1.64
SCN1B-206ENST00000638536 SYNGAP1Q96PV0 1343 aa25.28■■□□□ 1.64
SCN1B-206ENST00000638536 CDC27P30260 824 aa25.27■■□□□ 1.64
SCN1B-206ENST00000638536 TMTC3Q6ZXV5 915 aa25.27■■□□□ 1.64
SCN1B-206ENST00000638536 DIS3LQ8TF46 1054 aaKnown RBP25.27■■□□□ 1.64
SCN1B-206ENST00000638536 KATNBL1Q9H079 304 aa25.27■■□□□ 1.64
SCN1B-206ENST00000638536 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.27■■□□□ 1.64
SCN1B-206ENST00000638536 COL20A1Q9P218 1284 aa25.27■■□□□ 1.64
SCN1B-206ENST00000638536 PCDHA1Q9Y5I3 950 aa25.27■■□□□ 1.64
SCN1B-206ENST00000638536 PNMA6FA0A0J9YX94 578 aa25.26■■□□□ 1.63
SCN1B-206ENST00000638536 ZBTB43O43298 467 aa25.26■■□□□ 1.63
SCN1B-206ENST00000638536 FGD1P98174 961 aa25.26■■□□□ 1.63
SCN1B-206ENST00000638536 MSL3Q8N5Y2 521 aaKnown RBP25.26■■□□□ 1.63
SCN1B-206ENST00000638536 LENG1Q96BZ8 264 aaPredicted RBP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms