RNA–Protein interactions for RNA: ENST00000637671.1

SYNGAP1-223, Transcript of synaptic Ras GTPase activating protein 1, human

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNGAP1-223	ENST00000637671	TKFC	Q3LXA3	575 aa		14	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	TMEM67	Q5HYA8	995 aa		14	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	LRRC47	Q8N1G4	583 aa	Known RBP	14	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	FAM133A	Q8N9E0	248 aa		14	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	PANK1	Q8TE04	598 aa		14	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	WNT8A	Q9H1J5	351 aa		14	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	A1CF	Q9NQ94	594 aa	Known RBP	14	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	RNF146	Q9NTX7	359 aa		14	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	GNE	Q9Y223	722 aa	Known RBP	14	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	IGKV6D-41	A0A0C4DH26	115 aa		13.99	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	SUPT20HL2	P0C7V6	817 aa		13.99	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	BMP3	P12645	472 aa		13.99	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	ACTN1	P12814	892 aa		13.99	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	MYOG	P15173	224 aa		13.99	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	SMPD1	P17405	629 aa		13.99	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	TDO2	P48775	406 aa		13.99	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	KCNQ1	P51787	676 aa		13.99	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	STAT2	P52630	851 aa		13.99	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	SLFN13	Q68D06	897 aa		13.99	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	IQSEC1	Q6DN90	963 aa		13.99	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	MKL1	Q969V6	931 aa		13.99	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	CEP95	Q96GE4	821 aa		13.99	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	STRBP	Q96SI9	672 aa	Known RBP	13.99	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	MTMR4	Q9NYA4	1195 aa		13.99	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	COG5	Q9UP83	839 aa		13.99	□□□□□ -0.17
SYNGAP1-223	ENST00000637671		Q9Y3F1	56 aa		13.99	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.99	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	GREB1L	Q9C091	1923 aa	Predicted RBP	13.99	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	GRIN2D	O15399	1336 aa		13.98	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	SOWAHB	A6NEL2	793 aa		13.98	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	TMEM232	C9JQI7	657 aa		13.98	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	PSMC6	P62333	389 aa		13.98	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	FAM160B2	Q86V87	743 aa		13.98	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	CHURC1	Q8WUH1	139 aa		13.98	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	SCLY	Q96I15	445 aa		13.98	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.98	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	MTCH2	Q9Y6C9	303 aa		13.98	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	MCM3AP	O60318	1980 aa		13.98	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	GSG1L2	A8MUP6	293 aa		13.97	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	PRDM1	O75626	825 aa		13.97	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	CA3	P07451	260 aa		13.97	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	TSPY3	P0CV98	308 aa		13.97	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	TSPY8	P0CW00	308 aa		13.97	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	GNAT2	P19087	354 aa		13.97	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	POU3F3	P20264	500 aa	Predicted RBP	13.97	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	HOXD11	P31277	338 aa	Predicted RBP	13.97	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	TTLL4	Q14679	1199 aa		13.97	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	FBXO16	Q8IX29	292 aa	Predicted RBP	13.97	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	AGBL1	Q96MI9	1066 aa		13.97	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	TRERF1	Q96PN7	1200 aa		13.97	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	SLC9A7	Q96T83	725 aa		13.97	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	VTA1	Q9NP79	307 aa		13.97	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	KIF28P	B7ZC32	967 aa		13.96	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	APP	P05067	770 aa		13.96	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	SLC3A2	P08195	630 aa	Known RBP	13.96	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	ALAS1	P13196	640 aa		13.96	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	RFC2	P35250	354 aa		13.96	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	SLC1A4	P43007	532 aa		13.96	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	PDE4B	Q07343	736 aa		13.96	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	TMEM31	Q5JXX7	168 aa		13.96	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	PPP4R3B	Q5MIZ7	849 aa		13.96	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	EEPD1	Q7L9B9	569 aa		13.96	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	DEFB128	Q7Z7B8	93 aa		13.96	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	STAG1	Q8WVM7	1258 aa		13.96	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	GMCL1	Q96IK5	515 aa		13.96	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	CHMP4B	Q9H444	224 aa	Known RBP	13.96	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	GPHN	Q9NQX3	736 aa	Predicted RBP	13.96	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	PDGFC	Q9NRA1	345 aa		13.96	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	POLR3E	Q9NVU0	708 aa		13.96	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	DDX19B	Q9UMR2	479 aa		13.96	□□□□□ -0.17
SYNGAP1-223	ENST00000637671	PLIN4	Q96Q06	1357 aa		13.96	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	GBF1	Q92538	1859 aa		13.95	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	TNKS	O95271	1327 aa		13.95	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	RFXAP	O00287	272 aa		13.95	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	CYP2C9	P11712	490 aa		13.95	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	PTGS1	P23219	599 aa		13.95	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	CPT1A	P50416	773 aa		13.95	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	BRDT	Q58F21	947 aa	Predicted RBP	13.95	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	KIAA1211	Q6ZU35	1233 aa		13.95	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	RETREG2	Q8NC44	543 aa		13.95	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	PHOSPHO2	Q8TCD6	241 aa		13.95	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	ARNTL2	Q8WYA1	636 aa		13.95	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	APPBP2	Q92624	585 aa		13.95	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	HLA-C	Q95604	372 aa		13.95	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	LRFN3	Q9BTN0	628 aa		13.95	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	NACAP1	Q9BZK3	213 aa		13.95	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	LRRCC1	Q9C099	1032 aa		13.95	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	CERS4	Q9HA82	394 aa		13.95	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	TRMT13	Q9NUP7	481 aa	Known RBP	13.95	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	CYP39A1	Q9NYL5	469 aa		13.95	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	MYH7	P12883	1935 aa		13.95	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	ZNF536	O15090	1300 aa		13.94	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	RAD50	Q92878	1312 aa		13.94	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	GPAA1	O43292	621 aa		13.94	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	ZFY	P08048	801 aa	Predicted RBP	13.94	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	DUSP28	Q4G0W2	176 aa		13.94	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	FAM47C	Q5HY64	1035 aa		13.94	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	TAPT1	Q6NXT6	567 aa		13.94	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	NSMF	Q6X4W1	530 aa		13.94	□□□□□ -0.18
SYNGAP1-223	ENST00000637671	SIRT2	Q8IXJ6	389 aa		13.94	□□□□□ -0.18

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