RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.44□□□□□ -0.74
CLN8-214ENST00000637594 FOXP2O15409 715 aa10.44□□□□□ -0.74
CLN8-214ENST00000637594 ZEB2O60315 1214 aa10.44□□□□□ -0.74
CLN8-214ENST00000637594 SMPD1P17405 629 aa10.44□□□□□ -0.74
CLN8-214ENST00000637594 ITGA7Q13683 1181 aa10.44□□□□□ -0.74
CLN8-214ENST00000637594 AKNAD1Q5T1N1 836 aa10.44□□□□□ -0.74
CLN8-214ENST00000637594 PSRC1Q6PGN9 363 aaPredicted RBP10.44□□□□□ -0.74
CLN8-214ENST00000637594 BTNL9Q6UXG8 535 aa10.44□□□□□ -0.74
CLN8-214ENST00000637594 PBX4Q9BYU1 374 aa10.44□□□□□ -0.74
CLN8-214ENST00000637594 IL23AQ9NPF7 189 aa10.44□□□□□ -0.74
CLN8-214ENST00000637594 RNF146Q9NTX7 359 aa10.44□□□□□ -0.74
CLN8-214ENST00000637594 TCP11L1Q9NUJ3 509 aa10.44□□□□□ -0.74
CLN8-214ENST00000637594 PRR12Q9ULL5 1215 aa10.44□□□□□ -0.74
CLN8-214ENST00000637594 PCDHB15Q9Y5E8 787 aa10.44□□□□□ -0.74
CLN8-214ENST00000637594 VCANP13611 3396 aa10.44□□□□□ -0.74
CLN8-214ENST00000637594 RBM47A0AV96 593 aaKnown RBP10.43□□□□□ -0.74
CLN8-214ENST00000637594 DYNC1LI2O43237 492 aaPredicted RBP10.43□□□□□ -0.74
CLN8-214ENST00000637594 ORC4O43929 436 aa10.43□□□□□ -0.74
CLN8-214ENST00000637594 FGBP02675 491 aa10.43□□□□□ -0.74
CLN8-214ENST00000637594 ICAM1P05362 532 aa10.43□□□□□ -0.74
CLN8-214ENST00000637594 BEX3Q00994 111 aa10.43□□□□□ -0.74
CLN8-214ENST00000637594 FSCN1Q16658 493 aaKnown RBP10.43□□□□□ -0.74
CLN8-214ENST00000637594 CXCL17Q6UXB2 119 aa10.43□□□□□ -0.74
CLN8-214ENST00000637594 TLK2Q86UE8 772 aa10.43□□□□□ -0.74
CLN8-214ENST00000637594 AP5M1Q9H0R1 490 aa10.43□□□□□ -0.74
CLN8-214ENST00000637594 VTA1Q9NP79 307 aa10.43□□□□□ -0.74
CLN8-214ENST00000637594 PRDM6Q9NQX0 595 aa10.43□□□□□ -0.74
CLN8-214ENST00000637594 HOMER2Q9NSB8 354 aa10.43□□□□□ -0.74
CLN8-214ENST00000637594 SPTBN5Q9NRC6 3674 aaKnown RBP10.43□□□□□ -0.74
CLN8-214ENST00000637594 SALL3Q9BXA9 1300 aa10.42□□□□□ -0.74
CLN8-214ENST00000637594 TSPY2A6NKD2 308 aa10.42□□□□□ -0.74
CLN8-214ENST00000637594 ACRP10323 421 aa10.42□□□□□ -0.74
CLN8-214ENST00000637594 ALAS1P13196 640 aa10.42□□□□□ -0.74
CLN8-214ENST00000637594 CYP2C18P33260 490 aa10.42□□□□□ -0.74
CLN8-214ENST00000637594 PBX2P40425 430 aa10.42□□□□□ -0.74
CLN8-214ENST00000637594 RAB30Q15771 203 aa10.42□□□□□ -0.74
CLN8-214ENST00000637594 DUSP28Q4G0W2 176 aa10.42□□□□□ -0.74
CLN8-214ENST00000637594 MUM1L1Q5H9M0 696 aa10.42□□□□□ -0.74
CLN8-214ENST00000637594 TJAP1Q5JTD0 557 aa10.42□□□□□ -0.74
CLN8-214ENST00000637594 KCTD1Q719H9 257 aa10.42□□□□□ -0.74
CLN8-214ENST00000637594 RPUSD2Q8IZ73 545 aaKnown RBP10.42□□□□□ -0.74
CLN8-214ENST00000637594 DCAF4Q8WV16 495 aa10.42□□□□□ -0.74
CLN8-214ENST00000637594 ATXN2LQ8WWM7 1075 aaKnown RBP10.42□□□□□ -0.74
CLN8-214ENST00000637594 FSD1Q9BTV5 496 aa10.42□□□□□ -0.74
CLN8-214ENST00000637594 MAF1Q9H063 256 aa10.42□□□□□ -0.74
CLN8-214ENST00000637594 MTIF3Q9H2K0 278 aaKnown RBP10.42□□□□□ -0.74
CLN8-214ENST00000637594 RANBP17Q9H2T7 1088 aaKnown RBP10.42□□□□□ -0.74
CLN8-214ENST00000637594 HIPK3Q9H422 1215 aa10.42□□□□□ -0.74
CLN8-214ENST00000637594 INCENPQ9NQS7 918 aa10.42□□□□□ -0.74
CLN8-214ENST00000637594 PDGFCQ9NRA1 345 aa10.42□□□□□ -0.74
CLN8-214ENST00000637594 HELLSQ9NRZ9 838 aa10.42□□□□□ -0.74
CLN8-214ENST00000637594 PNMA2Q9UL42 364 aa10.42□□□□□ -0.74
CLN8-214ENST00000637594 STX8Q9UNK0 236 aa10.42□□□□□ -0.74
CLN8-214ENST00000637594 CUL9Q8IWT3 2517 aa10.41□□□□□ -0.74
CLN8-214ENST00000637594 PRUNE2Q8WUY3 3088 aa10.41□□□□□ -0.74
CLN8-214ENST00000637594 GRXCR1A8MXD5 290 aa10.41□□□□□ -0.74
CLN8-214ENST00000637594 NMT2O60551 498 aa10.41□□□□□ -0.74
CLN8-214ENST00000637594 SUPT20HL2P0C7V6 817 aa10.41□□□□□ -0.74
CLN8-214ENST00000637594 MX1P20591 662 aa10.41□□□□□ -0.74
CLN8-214ENST00000637594 CTDSPL2Q05D32 466 aa10.41□□□□□ -0.74
CLN8-214ENST00000637594 IKQ13123 557 aaPredicted RBP10.41□□□□□ -0.74
CLN8-214ENST00000637594 NOL8Q76FK4 1167 aaKnown RBP10.41□□□□□ -0.74
CLN8-214ENST00000637594 USP38Q8NB14 1042 aa10.41□□□□□ -0.74
CLN8-214ENST00000637594 OTUD7AQ8TE49 926 aaPredicted RBP10.41□□□□□ -0.74
CLN8-214ENST00000637594 EVI5LQ96CN4 794 aa10.41□□□□□ -0.74
CLN8-214ENST00000637594 VWCEQ96DN2 955 aa10.41□□□□□ -0.74
CLN8-214ENST00000637594 TTC14Q96N46 770 aa10.41□□□□□ -0.74
CLN8-214ENST00000637594 GAS2L1Q99501 681 aaPredicted RBP10.41□□□□□ -0.74
CLN8-214ENST00000637594 NOC4LQ9BVI4 516 aaKnown RBP10.41□□□□□ -0.74
CLN8-214ENST00000637594 PPP1R12CQ9BZL4 782 aa10.41□□□□□ -0.74
CLN8-214ENST00000637594 CXXC1Q9P0U4 656 aaPredicted RBP10.41□□□□□ -0.74
CLN8-214ENST00000637594 ADD3Q9UEY8 706 aaKnown RBP10.41□□□□□ -0.74
CLN8-214ENST00000637594 MSRAQ9UJ68 235 aa10.41□□□□□ -0.74
CLN8-214ENST00000637594 MYH4Q9Y623 1939 aa10.41□□□□□ -0.74
CLN8-214ENST00000637594 B4GALT4O60513 344 aa10.4□□□□□ -0.74
CLN8-214ENST00000637594 FGAP02671 866 aa10.4□□□□□ -0.74
CLN8-214ENST00000637594 PFKMP08237 780 aa10.4□□□□□ -0.74
CLN8-214ENST00000637594 TOP1P11387 765 aaKnown RBP10.4□□□□□ -0.74
CLN8-214ENST00000637594 KIAA1211Q6ZU35 1233 aa10.4□□□□□ -0.74
CLN8-214ENST00000637594 RGS22Q8NE09 1264 aa10.4□□□□□ -0.74
CLN8-214ENST00000637594 TMEM47Q9BQJ4 181 aa10.4□□□□□ -0.74
CLN8-214ENST00000637594 TRPV6Q9H1D0 765 aa10.4□□□□□ -0.74
CLN8-214ENST00000637594 ALDH8A1Q9H2A2 487 aaPredicted RBP10.4□□□□□ -0.74
CLN8-214ENST00000637594 CCPG1Q9ULG6 757 aa10.4□□□□□ -0.74
CLN8-214ENST00000637594 NKRFO15226 690 aaKnown RBP eCLIP10.39□□□□□ -0.75
CLN8-214ENST00000637594 RANBP6O60518 1105 aaKnown RBP10.39□□□□□ -0.75
CLN8-214ENST00000637594 KPNA6O60684 536 aa10.39□□□□□ -0.75
CLN8-214ENST00000637594 PCP11498 1178 aaKnown RBP10.39□□□□□ -0.75
CLN8-214ENST00000637594 POU3F3P20264 500 aaPredicted RBP10.39□□□□□ -0.75
CLN8-214ENST00000637594 NT5C2P49902 561 aa10.39□□□□□ -0.75
CLN8-214ENST00000637594 ALDH5A1P51649 535 aaPredicted RBP10.39□□□□□ -0.75
CLN8-214ENST00000637594 SNAP25P60880 206 aa10.39□□□□□ -0.75
CLN8-214ENST00000637594 PURAQ00577 322 aaKnown RBP10.39□□□□□ -0.75
CLN8-214ENST00000637594 BAATQ14032 418 aaPredicted RBP10.39□□□□□ -0.75
CLN8-214ENST00000637594 ADGRE1Q14246 886 aa10.39□□□□□ -0.75
CLN8-214ENST00000637594 MCMDC2Q4G0Z9 681 aa10.39□□□□□ -0.75
CLN8-214ENST00000637594 TMEM63BQ5T3F8 832 aa10.39□□□□□ -0.75
CLN8-214ENST00000637594 VPS53Q5VIR6 699 aa10.39□□□□□ -0.75
CLN8-214ENST00000637594 TTBK2Q6IQ55 1244 aa10.39□□□□□ -0.75
CLN8-214ENST00000637594 FBXO16Q8IX29 292 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms