RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 AFG3L2Q9Y4W6 797 aa17.53■□□□□ 0.4
CTSD-211ENST00000637387 UNCXA6NJT0 531 aa17.52■□□□□ 0.39
CTSD-211ENST00000637387 PPP1R12BO60237 982 aaPredicted RBP17.52■□□□□ 0.39
CTSD-211ENST00000637387 IKQ13123 557 aaPredicted RBP17.52■□□□□ 0.39
CTSD-211ENST00000637387 FAM160B2Q86V87 743 aa17.52■□□□□ 0.39
CTSD-211ENST00000637387 CNKSR2Q8WXI2 1034 aa17.52■□□□□ 0.39
CTSD-211ENST00000637387 ABHD8Q96I13 439 aa17.52■□□□□ 0.39
CTSD-211ENST00000637387 C6orf50Q9HD87 102 aa17.52■□□□□ 0.39
CTSD-211ENST00000637387 FEM1BQ9UK73 627 aa17.52■□□□□ 0.39
CTSD-211ENST00000637387 TRIM75PA6NK02 468 aa17.51■□□□□ 0.39
CTSD-211ENST00000637387 OPLAHO14841 1288 aa17.51■□□□□ 0.39
CTSD-211ENST00000637387 SPTLC2O15270 562 aa17.51■□□□□ 0.39
CTSD-211ENST00000637387 IREB2P48200 963 aaKnown RBP17.51■□□□□ 0.39
CTSD-211ENST00000637387 CLK2P49760 499 aaKnown RBP17.51■□□□□ 0.39
CTSD-211ENST00000637387 USP14P54578 494 aa17.51■□□□□ 0.39
CTSD-211ENST00000637387 STK38Q15208 465 aa17.51■□□□□ 0.39
CTSD-211ENST00000637387 CLMNQ96JQ2 1002 aa17.51■□□□□ 0.39
CTSD-211ENST00000637387 RIC8AQ9NPQ8 531 aa17.51■□□□□ 0.39
CTSD-211ENST00000637387 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.51■□□□□ 0.39
CTSD-211ENST00000637387 TMEM63CQ9P1W3 806 aa17.51■□□□□ 0.39
CTSD-211ENST00000637387 PCDHA7Q9UN72 937 aa17.51■□□□□ 0.39
CTSD-211ENST00000637387 GNA11P29992 359 aa17.5■□□□□ 0.39
CTSD-211ENST00000637387 ADCY7P51828 1080 aa17.5■□□□□ 0.39
CTSD-211ENST00000637387 HMGCS2P54868 508 aa17.5■□□□□ 0.39
CTSD-211ENST00000637387 SH3D19Q5HYK7 790 aa17.5■□□□□ 0.39
CTSD-211ENST00000637387 AXDND1Q5T1B0 1012 aaPredicted RBP17.5■□□□□ 0.39
CTSD-211ENST00000637387 SPRYD7Q5W111 196 aa17.5■□□□□ 0.39
CTSD-211ENST00000637387 KCNG4Q8TDN1 519 aa17.5■□□□□ 0.39
CTSD-211ENST00000637387 CHURC1Q8WUH1 139 aa17.5■□□□□ 0.39
CTSD-211ENST00000637387 AMNQ9BXJ7 453 aa17.5■□□□□ 0.39
CTSD-211ENST00000637387 RPAP3Q9H6T3 665 aaPredicted RBP17.5■□□□□ 0.39
CTSD-211ENST00000637387 TMEM260Q9NX78 707 aa17.5■□□□□ 0.39
CTSD-211ENST00000637387 PCDHA1Q9Y5I3 950 aa17.5■□□□□ 0.39
CTSD-211ENST00000637387 ZNF536O15090 1300 aa17.5■□□□□ 0.39
CTSD-211ENST00000637387 FBXO11Q86XK2 927 aa17.49■□□□□ 0.39
CTSD-211ENST00000637387 REXO1Q8N1G1 1221 aaKnown RBP17.49■□□□□ 0.39
CTSD-211ENST00000637387 KIFC2Q96AC6 838 aa17.49■□□□□ 0.39
CTSD-211ENST00000637387 MORC2Q9Y6X9 1032 aaPredicted RBP17.49■□□□□ 0.39
CTSD-211ENST00000637387 LCTP09848 1927 aa17.49■□□□□ 0.39
CTSD-211ENST00000637387 C19orf81C9J6K1 198 aa17.49■□□□□ 0.39
CTSD-211ENST00000637387 EDIL3O43854 480 aa17.49■□□□□ 0.39
CTSD-211ENST00000637387 PPP6R2O75170 966 aa17.49■□□□□ 0.39
CTSD-211ENST00000637387 LIG1P18858 919 aa17.49■□□□□ 0.39
CTSD-211ENST00000637387 TRAPPC10P48553 1259 aa17.49■□□□□ 0.39
CTSD-211ENST00000637387 UBE2SQ16763 222 aa17.49■□□□□ 0.39
CTSD-211ENST00000637387 TPRNQ4KMQ1 711 aa17.49■□□□□ 0.39
CTSD-211ENST00000637387 TTC38Q5R3I4 469 aa17.49■□□□□ 0.39
CTSD-211ENST00000637387 CAVIN1Q6NZI2 390 aaKnown RBP17.49■□□□□ 0.39
CTSD-211ENST00000637387 ANKRD13AQ8IZ07 590 aa17.49■□□□□ 0.39
CTSD-211ENST00000637387 SLF1Q9BQI6 1058 aa17.49■□□□□ 0.39
CTSD-211ENST00000637387 MCOLN1Q9GZU1 580 aa17.49■□□□□ 0.39
CTSD-211ENST00000637387 GOLPH3LQ9H4A5 285 aa17.49■□□□□ 0.39
CTSD-211ENST00000637387 ELP3Q9H9T3 547 aa17.49■□□□□ 0.39
CTSD-211ENST00000637387 CSADQ9Y600 493 aa17.49■□□□□ 0.39
CTSD-211ENST00000637387 MRVI1Q9Y6F6 885 aa17.49■□□□□ 0.39
CTSD-211ENST00000637387 SPDYE5A6NIY4 337 aa17.48■□□□□ 0.39
CTSD-211ENST00000637387 MARCKSP29966 332 aaPredicted RBP17.48■□□□□ 0.39
CTSD-211ENST00000637387 INF2Q27J81 1249 aa17.48■□□□□ 0.39
CTSD-211ENST00000637387 USH1GQ495M9 461 aa17.48■□□□□ 0.39
CTSD-211ENST00000637387 KRT25Q7Z3Z0 450 aa17.48■□□□□ 0.39
CTSD-211ENST00000637387 BICD2Q8TD16 824 aa17.48■□□□□ 0.39
CTSD-211ENST00000637387 SLC10A4Q96EP9 437 aa17.48■□□□□ 0.39
CTSD-211ENST00000637387 P2RX7Q99572 595 aaKnown RBP17.48■□□□□ 0.39
CTSD-211ENST00000637387 BIN2Q9UBW5 565 aaPredicted RBP17.48■□□□□ 0.39
CTSD-211ENST00000637387 PPP1R9AQ9ULJ8 1098 aa17.48■□□□□ 0.39
CTSD-211ENST00000637387 NOL7Q9UMY1 257 aaKnown RBP17.48■□□□□ 0.39
CTSD-211ENST00000637387 CCDC194A0A1B0GVG4 234 aa17.47■□□□□ 0.39
CTSD-211ENST00000637387 MEIS2O14770 477 aa17.47■□□□□ 0.39
CTSD-211ENST00000637387 ATP2B1P20020 1258 aa17.47■□□□□ 0.39
CTSD-211ENST00000637387 ME1P48163 572 aa17.47■□□□□ 0.39
CTSD-211ENST00000637387 MKRN3Q13064 507 aaKnown RBP17.47■□□□□ 0.39
CTSD-211ENST00000637387 JAKMIP3Q5VZ66 844 aa17.47■□□□□ 0.39
CTSD-211ENST00000637387 ADALQ6DHV7 355 aa17.47■□□□□ 0.39
CTSD-211ENST00000637387 PRPF38AQ8NAV1 312 aaKnown RBP17.47■□□□□ 0.39
CTSD-211ENST00000637387 CUL5Q93034 780 aa17.47■□□□□ 0.39
CTSD-211ENST00000637387 CFHR5Q9BXR6 569 aa17.47■□□□□ 0.39
CTSD-211ENST00000637387 TANGO6Q9C0B7 1094 aa17.47■□□□□ 0.39
CTSD-211ENST00000637387 FBXO2Q9UK22 296 aaPredicted RBP17.47■□□□□ 0.39
CTSD-211ENST00000637387 A0A1W2PQ27 194 aa17.46■□□□□ 0.39
CTSD-211ENST00000637387 A0A1W2PQ64 194 aa17.46■□□□□ 0.39
CTSD-211ENST00000637387 A0A1W2PQD8 194 aa17.46■□□□□ 0.39
CTSD-211ENST00000637387 ZBTB48P10074 688 aaPredicted RBP17.46■□□□□ 0.39
CTSD-211ENST00000637387 GRIN1Q05586 938 aa17.46■□□□□ 0.39
CTSD-211ENST00000637387 PPATQ06203 517 aa17.46■□□□□ 0.39
CTSD-211ENST00000637387 SREBF2Q12772 1141 aa17.46■□□□□ 0.39
CTSD-211ENST00000637387 NONOQ15233 471 aaKnown RBP eCLIP17.46■□□□□ 0.39
CTSD-211ENST00000637387 CCDC174Q6PII3 467 aa17.46■□□□□ 0.39
CTSD-211ENST00000637387 WNK4Q96J92 1243 aa17.46■□□□□ 0.39
CTSD-211ENST00000637387 GZF1Q9H116 711 aaPredicted RBP17.46■□□□□ 0.39
CTSD-211ENST00000637387 SLC38A10Q9HBR0 1119 aa17.46■□□□□ 0.39
CTSD-211ENST00000637387 USP17L15C9J2P7 530 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 USP17L13C9JLJ4 530 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 USP17L11C9JVI0 530 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 USP17L18D6R9N7 530 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 USP17L22D6RA61 530 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 USP17L17D6RBQ6 530 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 USP17L19D6RCP7 530 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 USP17L20D6RJB6 530 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 IRF6O14896 467 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 FLOT1O75955 427 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms