RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 UVSSAQ2YD98 709 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 XPOTO43592 962 aaKnown RBP9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 POLR2BP30876 1174 aaKnown RBP9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 HDAC1Q13547 482 aaPredicted RBP9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 POSTNQ15063 836 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 PGBD3Q8N328 593 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 OTUD7AQ8TE49 926 aaPredicted RBP9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 NT5C3AQ9H0P0 336 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 PIM2Q9P1W9 311 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 PTPN22Q9Y2R2 807 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 XDHP47989 1333 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 KCNQ3O43525 872 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 KRT3P12035 628 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 STAT2P52630 851 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 RWDD4Q6NW29 188 aaKnown RBP9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 EEF2KMTQ96G04 330 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 GREM2Q9H772 168 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 CALCOCO1Q9P1Z2 691 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 ADCY8P40145 1251 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 ANGPTL8Q6UXH0 198 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 BBS5Q8N3I7 341 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 YIPF2Q9BWQ6 316 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 PNMA2Q9UL42 364 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 MEIS1O00470 390 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 BUB1O43683 1085 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 ATP11AP98196 1134 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 CACNB1Q02641 598 aaPredicted RBP9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 YAF2Q8IY57 180 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 TTLL6Q8N841 843 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 GBP7Q8N8V2 638 aaPredicted RBP9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 GJA10Q969M2 543 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 HAUS1Q96CS2 278 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 TBC1D32Q96NH3 1257 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 PLCB1Q9NQ66 1216 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 GOLGA8CPA6NN73 597 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 PPP1R2P41236 205 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 DYNLT1P63172 113 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 PPP2R3AQ06190 1150 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 ACCSLQ4AC99 568 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 HMGXB3Q12766 1538 aa9.72□□□□□ -0.85
CHRNA7-219ENST00000636709 ERVV-2B6SEH9 535 aa9.71□□□□□ -0.85
CHRNA7-219ENST00000636709 CASQ2O14958 399 aaPredicted RBP9.71□□□□□ -0.85
CHRNA7-219ENST00000636709 MMP10P09238 476 aa9.71□□□□□ -0.85
CHRNA7-219ENST00000636709 SOX5P35711 763 aa9.71□□□□□ -0.85
CHRNA7-219ENST00000636709 PDE1CQ14123 709 aaPredicted RBP9.71□□□□□ -0.85
CHRNA7-219ENST00000636709 MAP7Q14244 749 aa9.71□□□□□ -0.85
CHRNA7-219ENST00000636709 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.71□□□□□ -0.85
CHRNA7-219ENST00000636709 SLC7A3Q8WY07 619 aa9.71□□□□□ -0.85
CHRNA7-219ENST00000636709 KMT5AQ9NQR1 393 aa9.71□□□□□ -0.85
CHRNA7-219ENST00000636709 FAM76AQ8TAV0 307 aa9.71□□□□□ -0.85
CHRNA7-219ENST00000636709 TTC25Q96NG3 672 aa9.71□□□□□ -0.85
CHRNA7-219ENST00000636709 SLC39A2Q9NP94 309 aa9.71□□□□□ -0.85
CHRNA7-219ENST00000636709 GOLGA8SH3BPF8 625 aa9.71□□□□□ -0.85
CHRNA7-219ENST00000636709 CACNB3P54284 484 aa9.71□□□□□ -0.85
CHRNA7-219ENST00000636709 BFSP1Q12934 665 aa9.71□□□□□ -0.85
CHRNA7-219ENST00000636709 GBP6Q6ZN66 633 aa9.71□□□□□ -0.85
CHRNA7-219ENST00000636709 PLEKHM2Q8IWE5 1019 aa9.71□□□□□ -0.85
CHRNA7-219ENST00000636709 PNMA3Q9UL41 463 aa9.71□□□□□ -0.85
CHRNA7-219ENST00000636709 RABGAP1Q9Y3P9 1069 aa9.71□□□□□ -0.85
CHRNA7-219ENST00000636709 NEURL1BA8MQ27 555 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 CD58P19256 250 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 EN1Q05925 392 aaPredicted RBP9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 LLGL1Q15334 1064 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 LRRC24Q50LG9 513 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 FAM117BQ6P1L5 589 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 IWS1Q96ST2 819 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 FAM8A1Q9UBU6 413 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 SBNO1A3KN83 1393 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 E7EWF7 191 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 SGK1O00141 431 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 LMNB1P20700 586 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 KRT26Q7Z3Y9 468 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 SCN4BQ8IWT1 228 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 BLIDQ8IZY5 108 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 AFG1LQ8WV93 481 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 CEP170P1Q96L14 293 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 SWAP70Q9UH65 585 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 BAG5Q9UL15 447 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 USP17L3A6NCW0 530 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 USP17L4A6NCW7 530 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 WDR64B1ANS9 1081 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 USP17L1Q7RTZ2 530 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 NAPGQ99747 312 aaPredicted RBP9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 PPP1R12CQ9BZL4 782 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 KIAA1024Q9UPX6 916 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 SUGT1Q9Y2Z0 365 aa9.71□□□□□ -0.86
CHRNA7-219ENST00000636709 ABCA10Q8WWZ4 1543 aa9.7□□□□□ -0.86
CHRNA7-219ENST00000636709 NOLC1Q14978 699 aaKnown RBP eCLIP9.7□□□□□ -0.86
CHRNA7-219ENST00000636709 MMEL1Q495T6 779 aa9.7□□□□□ -0.86
CHRNA7-219ENST00000636709 ODR4Q5SWX8 454 aa9.7□□□□□ -0.86
CHRNA7-219ENST00000636709 IFNL3Q8IZI9 196 aa9.7□□□□□ -0.86
CHRNA7-219ENST00000636709 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.7□□□□□ -0.86
CHRNA7-219ENST00000636709 JAK2O60674 1132 aa9.7□□□□□ -0.86
CHRNA7-219ENST00000636709 UPP2O95045 317 aa9.7□□□□□ -0.86
CHRNA7-219ENST00000636709 ZNF202O95125 648 aa9.7□□□□□ -0.86
CHRNA7-219ENST00000636709 HOXD10P28358 340 aa9.7□□□□□ -0.86
CHRNA7-219ENST00000636709 ATP6V1E1P36543 226 aa9.7□□□□□ -0.86
CHRNA7-219ENST00000636709 STAT1P42224 750 aa9.7□□□□□ -0.86
CHRNA7-219ENST00000636709 DYNLL1P63167 89 aaKnown RBP9.7□□□□□ -0.86
CHRNA7-219ENST00000636709 AOC3Q16853 763 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms