RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 SSBP05455 408 aaKnown RBP eCLIP15.71■□□□□ 0.11
CACNA1A-228ENST00000636610 GLIS3Q8NEA6 775 aa15.71■□□□□ 0.11
CACNA1A-228ENST00000636610 EXOC1Q9NV70 894 aa15.71■□□□□ 0.11
CACNA1A-228ENST00000636610 TBC1D7Q9P0N9 293 aa15.71■□□□□ 0.11
CACNA1A-228ENST00000636610 L1RE1Q9UN81 338 aa15.71■□□□□ 0.11
CACNA1A-228ENST00000636610 BCL9LQ86UU0 1499 aa15.71■□□□□ 0.1
CACNA1A-228ENST00000636610 LGALS16A8MUM7 142 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 ERLIN1O75477 346 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 FGRP09769 529 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 GPS2Q13227 327 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 PICALMQ13492 652 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 STIM1Q13586 685 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 JAKMIP2Q96AA8 810 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 COA7Q96BR5 231 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 PIGSQ96S52 555 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 MMRN2Q9H8L6 949 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 TCP11L1Q9NUJ3 509 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 SEMA3EO15041 775 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 EPHB6O15197 1021 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 C2orf54Q08AI8 447 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 CCDC96Q2M329 555 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 POTEDQ86YR6 584 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 DUSP9Q99956 384 aaKnown RBP15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 NHEJ1Q9H9Q4 299 aaPredicted RBP15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 SPATA31A1Q5TZJ5 1347 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 STXBP3O00186 592 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 TRIM66O15016 1216 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 TRAPPC10P48553 1259 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 CCDC51Q96ER9 411 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 UBXN6Q9BZV1 441 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 MLXIPQ9HAP2 919 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 POLD4Q9HCU8 107 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 LRWD1Q9UFC0 647 aa15.7■□□□□ 0.1
CACNA1A-228ENST00000636610 POTEMA6NI47 508 aa15.69■□□□□ 0.1
CACNA1A-228ENST00000636610 PDE2AO00408 941 aaPredicted RBP15.69■□□□□ 0.1
CACNA1A-228ENST00000636610 MAP2K7O14733 419 aa15.69■□□□□ 0.1
CACNA1A-228ENST00000636610 EZH2Q15910 746 aaKnown RBP15.69■□□□□ 0.1
CACNA1A-228ENST00000636610 HSP90B2PQ58FF3 399 aa15.69■□□□□ 0.1
CACNA1A-228ENST00000636610 ANKRD36CQ5JPF3 1778 aa15.69■□□□□ 0.1
CACNA1A-228ENST00000636610 TTI2Q6NXR4 508 aa15.69■□□□□ 0.1
CACNA1A-228ENST00000636610 ITIH6Q6UXX5 1313 aa15.69■□□□□ 0.1
CACNA1A-228ENST00000636610 C2CD5Q86YS7 1000 aa15.69■□□□□ 0.1
CACNA1A-228ENST00000636610 TIAM2Q8IVF5 1701 aa15.69■□□□□ 0.1
CACNA1A-228ENST00000636610 TBCKQ8TEA7 893 aa15.69■□□□□ 0.1
CACNA1A-228ENST00000636610 SAR1BQ9Y6B6 198 aa15.69■□□□□ 0.1
CACNA1A-228ENST00000636610 CACNA1SQ13698 1873 aa15.69■□□□□ 0.1
CACNA1A-228ENST00000636610 IPO7O95373 1038 aaKnown RBP15.69■□□□□ 0.1
CACNA1A-228ENST00000636610 MYBL2P10244 700 aa15.69■□□□□ 0.1
CACNA1A-228ENST00000636610 APBA1Q02410 837 aa15.69■□□□□ 0.1
CACNA1A-228ENST00000636610 CACNB1Q02641 598 aaPredicted RBP15.69■□□□□ 0.1
CACNA1A-228ENST00000636610 PTPROQ16827 1216 aa15.69■□□□□ 0.1
CACNA1A-228ENST00000636610 LRRC47Q8N1G4 583 aaKnown RBP15.69■□□□□ 0.1
CACNA1A-228ENST00000636610 CCDC148Q8NFR7 591 aa15.69■□□□□ 0.1
CACNA1A-228ENST00000636610 TANGO6Q9C0B7 1094 aa15.69■□□□□ 0.1
CACNA1A-228ENST00000636610 RASSF10A6NK89 507 aa15.68■□□□□ 0.1
CACNA1A-228ENST00000636610 NAP1L1P55209 391 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-228ENST00000636610 SLC7A5Q01650 507 aa15.68■□□□□ 0.1
CACNA1A-228ENST00000636610 ARID5AQ03989 594 aa15.68■□□□□ 0.1
CACNA1A-228ENST00000636610 ARL6IP4Q66PJ3 421 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-228ENST00000636610 C10orf67Q8IYJ2 551 aa15.68■□□□□ 0.1
CACNA1A-228ENST00000636610 ZNHIT6Q9NWK9 470 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-228ENST00000636610 DOCK2Q92608 1830 aa15.68■□□□□ 0.1
CACNA1A-228ENST00000636610 RNASE9P60153 205 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-228ENST00000636610 AMPD2Q01433 879 aa15.68■□□□□ 0.1
CACNA1A-228ENST00000636610 TMC4Q7Z404 712 aa15.68■□□□□ 0.1
CACNA1A-228ENST00000636610 EYA3Q99504 573 aa15.68■□□□□ 0.1
CACNA1A-228ENST00000636610 TRIM9Q9C026 710 aa15.68■□□□□ 0.1
CACNA1A-228ENST00000636610 GPCPD1Q9NPB8 672 aa15.68■□□□□ 0.1
CACNA1A-228ENST00000636610 BCORQ6W2J9 1755 aa15.68■□□□□ 0.1
CACNA1A-228ENST00000636610 USP17L5A8MUK1 530 aa15.68■□□□□ 0.1
CACNA1A-228ENST00000636610 ZNF507Q8TCN5 953 aa15.68■□□□□ 0.1
CACNA1A-228ENST00000636610 NUDT12Q9BQG2 462 aa15.68■□□□□ 0.1
CACNA1A-228ENST00000636610 BARHL2Q9NY43 387 aa15.68■□□□□ 0.1
CACNA1A-228ENST00000636610 NCK2O43639 380 aa15.67■□□□□ 0.1
CACNA1A-228ENST00000636610 WHAMMP3Q1A5X7 153 aa15.67■□□□□ 0.1
CACNA1A-228ENST00000636610 DNAJC21Q5F1R6 531 aaKnown RBP15.67■□□□□ 0.1
CACNA1A-228ENST00000636610 TPTE2Q6XPS3 522 aa15.67■□□□□ 0.1
CACNA1A-228ENST00000636610 TXLNBQ8N3L3 684 aa15.67■□□□□ 0.1
CACNA1A-228ENST00000636610 GIMAP8Q8ND71 665 aaPredicted RBP15.67■□□□□ 0.1
CACNA1A-228ENST00000636610 HDAC7Q8WUI4 952 aa15.67■□□□□ 0.1
CACNA1A-228ENST00000636610 P2RX5Q93086 422 aa15.67■□□□□ 0.1
CACNA1A-228ENST00000636610 CRACR2AQ9BSW2 395 aa15.67■□□□□ 0.1
CACNA1A-228ENST00000636610 DEF6Q9H4E7 631 aa15.67■□□□□ 0.1
CACNA1A-228ENST00000636610 ATP8B1O43520 1251 aa15.67■□□□□ 0.1
CACNA1A-228ENST00000636610 TDP2O95551 362 aa15.67■□□□□ 0.1
CACNA1A-228ENST00000636610 OR52Z1P0C646 297 aa15.67■□□□□ 0.1
CACNA1A-228ENST00000636610 RASA1P20936 1047 aa15.67■□□□□ 0.1
CACNA1A-228ENST00000636610 GRM4Q14833 912 aa15.67■□□□□ 0.1
CACNA1A-228ENST00000636610 AMOTL1Q8IY63 956 aa15.67■□□□□ 0.1
CACNA1A-228ENST00000636610 MSANTD4Q8NCY6 345 aa15.67■□□□□ 0.1
CACNA1A-228ENST00000636610 CEP95Q96GE4 821 aa15.67■□□□□ 0.1
CACNA1A-228ENST00000636610 CCDC42Q96M95 316 aa15.67■□□□□ 0.1
CACNA1A-228ENST00000636610 NLRC4Q9NPP4 1024 aa15.67■□□□□ 0.1
CACNA1A-228ENST00000636610 KBTBD4Q9NVX7 518 aa15.67■□□□□ 0.1
CACNA1A-228ENST00000636610 LRP5O75197 1615 aa15.67■□□□□ 0.1
CACNA1A-228ENST00000636610 UTRNP46939 3433 aa15.67■□□□□ 0.1
CACNA1A-228ENST00000636610 BUB1O43683 1085 aa15.66■□□□□ 0.1
CACNA1A-228ENST00000636610 MOCS3O95396 460 aa15.66■□□□□ 0.1
CACNA1A-228ENST00000636610 BTDP43251 543 aa15.66■□□□□ 0.1
CACNA1A-228ENST00000636610 SOGA3Q5TF21 947 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms