RNA–Protein interactions for RNA: ENST00000634403.1

SMARCA2-222, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 2

Gene SMARCA2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-222	ENST00000634403	SMG8	Q8ND04	991 aa	Known RBP	6.65	□□□□□ -1.34
SMARCA2-222	ENST00000634403	ZCRB1	Q8TBF4	217 aa	Known RBP	6.65	□□□□□ -1.34
SMARCA2-222	ENST00000634403	SPATA32	Q96LK8	384 aa		6.65	□□□□□ -1.34
SMARCA2-222	ENST00000634403	AKTIP	Q9H8T0	292 aa		6.65	□□□□□ -1.34
SMARCA2-222	ENST00000634403	SUGCT	Q9HAC7	445 aa		6.65	□□□□□ -1.34
SMARCA2-222	ENST00000634403	CYP4F12	Q9HCS2	524 aa		6.65	□□□□□ -1.34
SMARCA2-222	ENST00000634403	BRMS1	Q9HCU9	246 aa		6.65	□□□□□ -1.34
SMARCA2-222	ENST00000634403	DDX21	Q9NR30	783 aa	Known RBP eCLIP	6.65	□□□□□ -1.34
SMARCA2-222	ENST00000634403	ADCY9	O60503	1353 aa		6.65	□□□□□ -1.35
SMARCA2-222	ENST00000634403	PRAMEF27	A3QJZ7	478 aa		6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	PI4KAP2	A4QPH2	592 aa		6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	ERVV-2	B6SEH9	535 aa		6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	C9orf172	C9J069	976 aa		6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	GFRA2	O00451	464 aa		6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	GRIN3B	O60391	1043 aa		6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	SNRPA1	P09661	255 aa	Known RBP	6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	UBTFL1	P0CB47	393 aa	Predicted RBP	6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	DRD2	P14416	443 aa		6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	IL2RB	P14784	551 aa		6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	NOS3	P29474	1203 aa		6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	MCM4	P33991	863 aa		6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	SF3A1	Q15459	793 aa	Known RBP	6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	TOM1L2	Q6ZVM7	507 aa		6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	ALYREF	Q86V81	257 aa	Known RBP	6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	C12orf40	Q86WS4	652 aa		6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	PI4KAP1	Q8N8J0	262 aa		6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	SSH3	Q8TE77	659 aa		6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	GML	Q99445	158 aa		6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	TANGO6	Q9C0B7	1094 aa		6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	CRIM1	Q9NZV1	1036 aa		6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	PRKAG2	Q9UGJ0	569 aa		6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	HDAC5	Q9UQL6	1122 aa		6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	SNCAIP	Q9Y6H5	919 aa		6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	SYNGAP1	Q96PV0	1343 aa		6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	PCDH11X	Q9BZA7	1347 aa		6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	PCDH11Y	Q9BZA8	1340 aa		6.64	□□□□□ -1.35
SMARCA2-222	ENST00000634403	PRAMEF22	A3QJZ6	481 aa		6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	RNF225	M0QZC1	329 aa	Predicted RBP	6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	UTY	O14607	1347 aa		6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	RAB11FIP3	O75154	756 aa		6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	TIAF1	O95411	115 aa		6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	DDX58	O95786	925 aa	Known RBP	6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	FGR	P09769	529 aa		6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	GLB1	P16278	677 aa		6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	IREB2	P48200	963 aa	Known RBP	6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	SOX9	P48436	509 aa		6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	ERVK-24	P63145	666 aa		6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	NRG1	Q02297	640 aa	Predicted RBP	6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	SOX4	Q06945	474 aa	Predicted RBP	6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	SLC39A6	Q13433	755 aa		6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	MBTPS1	Q14703	1052 aa		6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	PROSER3	Q2NL68	480 aa		6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	PPM1J	Q5JR12	505 aa		6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	TTC22	Q5TAA0	569 aa		6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	AHDC1	Q5TGY3	1603 aa	Predicted RBP	6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	ANKRD34A	Q69YU3	496 aa		6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403		Q6ZS46	218 aa		6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	CYFIP1	Q7L576	1253 aa		6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	MCF2L2	Q86YR7	1114 aa		6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	C12orf50	Q8NA57	414 aa	Predicted RBP	6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	WFDC12	Q8WWY7	111 aa		6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	ZNF496	Q96IT1	587 aa	Predicted RBP	6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	SEC16B	Q96JE7	1060 aa		6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	FMNL2	Q96PY5	1086 aa		6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	C22orf23	Q9BZE7	217 aa		6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	STK17A	Q9UEE5	414 aa		6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	HIF3A	Q9Y2N7	669 aa		6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	LRRFIP2	Q9Y608	721 aa	Known RBP	6.63	□□□□□ -1.35
SMARCA2-222	ENST00000634403	LTBP4	Q8N2S1	1624 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	COL22A1	Q8NFW1	1626 aa	Predicted RBP	6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	SALL3	Q9BXA9	1300 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	PNMA6E	A0A0J9YXQ4	647 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	SMARCA5	O60264	1052 aa	Predicted RBP	6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	CDC45	O75419	566 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	ANXA1	P04083	346 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	GSPT1	P15170	499 aa	Known RBP	6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	PREP	P48147	710 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	EVA1C	P58658	441 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	MTX1	Q13505	466 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	COL9A2	Q14055	689 aa	Predicted RBP	6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	ADGRE1	Q14246	886 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	BECN1	Q14457	450 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	GK5	Q6ZS86	529 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	DYM	Q7RTS9	669 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	LRP10	Q7Z4F1	713 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	C16orf71	Q8IYS4	520 aa	Predicted RBP	6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	TTC5	Q8N0Z6	440 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	LINS1	Q8NG48	757 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	FANCD2OS	Q96PS1	177 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	LRRCC1	Q9C099	1032 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	PICK1	Q9NRD5	415 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	DISC1	Q9NRI5	854 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	USP35	Q9P2H5	1018 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	STAP2	Q9UGK3	403 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	PPT2	Q9UMR5	302 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	MAP3K2	Q9Y2U5	619 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	PCDHB14	Q9Y5E9	798 aa		6.62	□□□□□ -1.35
SMARCA2-222	ENST00000634403	CORIN	Q9Y5Q5	1042 aa		6.62	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms