RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 ARL4AP40617 200 aa4.89□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 NOP2P46087 812 aaKnown RBP4.89□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 ZNF394Q53GI3 561 aa4.89□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 CWF19L1Q69YN2 538 aaKnown RBP4.89□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 METTL16Q86W50 562 aaKnown RBP4.89□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 CCDC144CPQ8IYA2 1237 aa4.89□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 GPRASP2Q96D09 838 aa4.89□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 SEC16BQ96JE7 1060 aa4.89□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 CRBNQ96SW2 442 aa4.89□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 DSCC1Q9BVC3 393 aa4.89□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 TGIF2Q9GZN2 237 aa4.89□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 SLITRK6Q9H5Y7 841 aa4.89□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 PHAXQ9H814 394 aaKnown RBP4.89□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 USP40Q9NVE5 1235 aa4.89□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 KLHL14Q9P2G3 628 aa4.89□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 SF3B6Q9Y3B4 125 aaKnown RBP4.89□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 FADS2P1A8MWK0 482 aa4.88□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 SLPIP03973 132 aa4.88□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 ACRP10323 421 aa4.88□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 ITGA4P13612 1032 aa4.88□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 GDF5P43026 501 aa4.88□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 NCKAP1LP55160 1127 aa4.88□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 CORO7P57737 925 aa4.88□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 ERVFRD-1P60508 538 aa4.88□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 RACK1P63244 317 aaKnown RBP4.88□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 CAP1Q01518 475 aa4.88□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 PAK2Q13177 524 aa4.88□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 SNW1Q13573 536 aaKnown RBP4.88□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 NT5DC1Q5TFE4 455 aa4.88□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 CPZQ66K79 652 aa4.88□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 CEP128Q6ZU80 1094 aa4.88□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 TMC6Q7Z403 805 aa4.88□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 LSRQ86X29 649 aaPredicted RBP4.88□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 HHIPL1Q96JK4 782 aa4.88□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 ANTXR1Q9H6X2 564 aa4.88□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 ZNF214Q9UL59 606 aaPredicted RBP4.88□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 PCDHGB7Q9Y5F8 929 aa4.88□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 TAF6LQ9Y6J9 622 aa4.88□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 ITGB3P05106 788 aa4.87□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 MPOP05164 745 aa4.87□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 NAT2P11245 290 aa4.87□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 C6P13671 934 aa4.87□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 VAV1P15498 845 aa4.87□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 GIPRP48546 466 aa4.87□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 EIF6P56537 245 aaKnown RBP4.87□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 RTP1P59025 263 aa4.87□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 POU4F1Q01851 419 aa4.87□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 TCEAL1Q15170 157 aa4.87□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 HLA-DQA1Q5Y7H0 255 aa4.87□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 SLCO6A1Q86UG4 719 aa4.87□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 MRRFQ96E11 262 aaKnown RBP4.87□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 KRTAP3-1Q9BYR8 98 aa4.87□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 ERVK13-1Q9NX77 482 aa4.87□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 GFOD1Q9NXC2 390 aa4.87□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 WHRNQ9P202 907 aa4.87□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 SHOXO15266 292 aa4.86□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 CD247P20963 164 aa4.86□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 CTSKP43235 329 aa4.86□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 ZNF143P52747 638 aaPredicted RBP4.86□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 CASP7P55210 303 aa4.86□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 UNC5AQ6ZN44 842 aa4.86□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 ZFPM1Q8IX07 1006 aa4.86□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 ADGRG2Q8IZP9 1017 aa4.86□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 NLGN1Q8N2Q7 840 aa4.86□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 RGS22Q8NE09 1264 aa4.86□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 ZNF512BQ96KM6 892 aaPredicted RBP4.86□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 SPATA25Q9BR10 227 aa4.86□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 PLCD4Q9BRC7 762 aa4.86□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 GBP3Q9H0R5 595 aa4.86□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 GP6Q9HCN6 339 aa4.86□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 ACSL6Q9UKU0 697 aa4.86□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.86□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 DIS3Q9Y2L1 958 aaKnown RBP4.86□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 DUSP10Q9Y6W6 482 aa4.86□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 A0A1B0GTL3 188 aa4.85□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 C9IYK1 514 aa4.85□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 LIMS1P48059 325 aa4.85□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 HDLBPQ00341 1268 aaKnown RBP4.85□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 GRB10Q13322 594 aa4.85□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 NR1I3Q14994 352 aa4.85□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 HSF5Q4G112 596 aaPredicted RBP4.85□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 CRB2Q5IJ48 1285 aa4.85□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 NOL9Q5SY16 702 aaKnown RBP4.85□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 NT5DC4Q86YG4 428 aa4.85□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 CRACR2BQ8N4Y2 399 aaPredicted RBP4.85□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 RBM15Q96T37 977 aaKnown RBP eCLIP4.85□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 C1QTNF3Q9BXJ4 246 aa4.85□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 GINM1Q9NU53 330 aa4.85□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 PPT2Q9UMR5 302 aa4.85□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 GPR55Q9Y2T6 319 aaPredicted RBP4.85□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 TRBV23OR9-2A0A075B6M9 112 aa4.84□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 CYR61O00622 381 aa4.84□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 SRGAP3O43295 1099 aa4.84□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 FKTNO75072 461 aa4.84□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 ZNF20P17024 532 aa4.84□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 IGFBP6P24592 240 aaPredicted RBP4.84□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 RAB3GAP1Q15042 981 aa4.84□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 VWA3BQ502W6 1294 aa4.84□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 RTP2Q5QGT7 225 aa4.84□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 FBXW10Q5XX13 1052 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms