RNA–Protein interactions for RNA: ENST00000629999.2

DDX49-214, Transcript of DEAD-box helicase 49, humanhuman

TSL 5 BASIC

Gene DDX49, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-214ENST00000629999 PTPRAP18433 802 aa16.74■□□□□ 0.27
DDX49-214ENST00000629999 MRPL12P52815 198 aaKnown RBP16.74■□□□□ 0.27
DDX49-214ENST00000629999 SPP2Q13103 211 aa16.74■□□□□ 0.27
DDX49-214ENST00000629999 RNF214Q8ND24 703 aa16.74■□□□□ 0.27
DDX49-214ENST00000629999 KIAA1683Q9H0B3 1180 aa16.74■□□□□ 0.27
DDX49-214ENST00000629999 GLTPD2A6NH11 291 aa16.74■□□□□ 0.27
DDX49-214ENST00000629999 USP17L15C9J2P7 530 aa16.74■□□□□ 0.27
DDX49-214ENST00000629999 USP17L13C9JLJ4 530 aa16.74■□□□□ 0.27
DDX49-214ENST00000629999 USP17L11C9JVI0 530 aa16.74■□□□□ 0.27
DDX49-214ENST00000629999 USP17L18D6R9N7 530 aa16.74■□□□□ 0.27
DDX49-214ENST00000629999 USP17L22D6RA61 530 aa16.74■□□□□ 0.27
DDX49-214ENST00000629999 USP17L17D6RBQ6 530 aa16.74■□□□□ 0.27
DDX49-214ENST00000629999 USP17L19D6RCP7 530 aa16.74■□□□□ 0.27
DDX49-214ENST00000629999 USP17L20D6RJB6 530 aa16.74■□□□□ 0.27
DDX49-214ENST00000629999 CCNT1O60563 726 aaKnown RBP16.74■□□□□ 0.27
DDX49-214ENST00000629999 USP17L24Q0WX57 530 aa16.74■□□□□ 0.27
DDX49-214ENST00000629999 EAPPQ56P03 285 aaPredicted RBP16.74■□□□□ 0.27
DDX49-214ENST00000629999 USP17L6PQ6QN14 398 aa16.74■□□□□ 0.27
DDX49-214ENST00000629999 NEK8Q86SG6 692 aa16.74■□□□□ 0.27
DDX49-214ENST00000629999 IPO4Q8TEX9 1081 aaKnown RBP16.74■□□□□ 0.27
DDX49-214ENST00000629999 ERCC4Q92889 916 aaPredicted RBP16.74■□□□□ 0.27
DDX49-214ENST00000629999 SDF4Q9BRK5 362 aa16.74■□□□□ 0.27
DDX49-214ENST00000629999 TANGO6Q9C0B7 1094 aa16.74■□□□□ 0.27
DDX49-214ENST00000629999 FAM13BQ9NYF5 915 aa16.74■□□□□ 0.27
DDX49-214ENST00000629999 FEM1BQ9UK73 627 aa16.74■□□□□ 0.27
DDX49-214ENST00000629999 HPSEQ9Y251 543 aa16.74■□□□□ 0.27
DDX49-214ENST00000629999 WDR46O15213 610 aaKnown RBP16.73■□□□□ 0.27
DDX49-214ENST00000629999 XRCC6P12956 609 aaKnown RBP eCLIP16.73■□□□□ 0.27
DDX49-214ENST00000629999 USP50Q70EL3 339 aaPredicted RBP16.73■□□□□ 0.27
DDX49-214ENST00000629999 FAM160B2Q86V87 743 aa16.73■□□□□ 0.27
DDX49-214ENST00000629999 LPAR1Q92633 364 aa16.73■□□□□ 0.27
DDX49-214ENST00000629999 FERMT2Q96AC1 680 aa16.73■□□□□ 0.27
DDX49-214ENST00000629999 AS3MTQ9HBK9 375 aa16.73■□□□□ 0.27
DDX49-214ENST00000629999 KCNH3Q9ULD8 1083 aa16.73■□□□□ 0.27
DDX49-214ENST00000629999 ZHX2Q9Y6X8 837 aa16.73■□□□□ 0.27
DDX49-214ENST00000629999 USP49Q70CQ1 688 aa16.72■□□□□ 0.27
DDX49-214ENST00000629999 ZNF579Q8NAF0 562 aaKnown RBP16.72■□□□□ 0.27
DDX49-214ENST00000629999 FUCA2Q9BTY2 467 aa16.72■□□□□ 0.27
DDX49-214ENST00000629999 ZC3H4Q9UPT8 1303 aaKnown RBP16.72■□□□□ 0.27
DDX49-214ENST00000629999 USP2O75604 605 aaPredicted RBP16.72■□□□□ 0.27
DDX49-214ENST00000629999 CCDC192P0DO97 292 aa16.72■□□□□ 0.27
DDX49-214ENST00000629999 CHRM1P11229 460 aaPredicted RBP16.72■□□□□ 0.27
DDX49-214ENST00000629999 VCAM1P19320 739 aa16.72■□□□□ 0.27
DDX49-214ENST00000629999 CLK2P49760 499 aaKnown RBP16.72■□□□□ 0.27
DDX49-214ENST00000629999 RBM43Q6ZSC3 357 aaKnown RBP16.72■□□□□ 0.27
DDX49-214ENST00000629999 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.72■□□□□ 0.27
DDX49-214ENST00000629999 ZNF280CQ8ND82 737 aa16.72■□□□□ 0.27
DDX49-214ENST00000629999 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.72■□□□□ 0.27
DDX49-214ENST00000629999 PANK2Q9BZ23 570 aa16.72■□□□□ 0.27
DDX49-214ENST00000629999 TMEM60Q9H2L4 133 aa16.72■□□□□ 0.27
DDX49-214ENST00000629999 RANBP17Q9H2T7 1088 aaKnown RBP16.72■□□□□ 0.27
DDX49-214ENST00000629999 EMILIN3Q9NT22 766 aa16.72■□□□□ 0.27
DDX49-214ENST00000629999 MORC2Q9Y6X9 1032 aaPredicted RBP16.72■□□□□ 0.27
DDX49-214ENST00000629999 CTAGE5O15320 804 aa16.71■□□□□ 0.27
DDX49-214ENST00000629999 USP14P54578 494 aa16.71■□□□□ 0.27
DDX49-214ENST00000629999 PLCB2Q00722 1185 aa16.71■□□□□ 0.27
DDX49-214ENST00000629999 TYRO3Q06418 890 aa16.71■□□□□ 0.27
DDX49-214ENST00000629999 IL17AQ16552 155 aa16.71■□□□□ 0.27
DDX49-214ENST00000629999 PDILTQ8N807 584 aa16.71■□□□□ 0.27
DDX49-214ENST00000629999 C4orf32Q8N8J7 132 aa16.71■□□□□ 0.27
DDX49-214ENST00000629999 SYMPKQ92797 1274 aaKnown RBP16.71■□□□□ 0.27
DDX49-214ENST00000629999 EPSTI1Q96J88 318 aa16.71■□□□□ 0.27
DDX49-214ENST00000629999 SLF1Q9BQI6 1058 aa16.71■□□□□ 0.27
DDX49-214ENST00000629999 FAM237AA0A1B0GTK4 181 aa16.7■□□□□ 0.26
DDX49-214ENST00000629999 PLA2G6O60733 806 aa16.7■□□□□ 0.26
DDX49-214ENST00000629999 BACE1P56817 501 aa16.7■□□□□ 0.26
DDX49-214ENST00000629999 SASS6Q6UVJ0 657 aa16.7■□□□□ 0.26
DDX49-214ENST00000629999 WDR18Q9BV38 432 aa16.7■□□□□ 0.26
DDX49-214ENST00000629999 GLT8D2Q9H1C3 349 aa16.7■□□□□ 0.26
DDX49-214ENST00000629999 TAF1DQ9H5J8 278 aaPredicted RBP16.7■□□□□ 0.26
DDX49-214ENST00000629999 RPAP3Q9H6T3 665 aaPredicted RBP16.7■□□□□ 0.26
DDX49-214ENST00000629999 POLR2DO15514 142 aaKnown RBP16.7■□□□□ 0.26
DDX49-214ENST00000629999 NEMFO60524 1076 aa16.7■□□□□ 0.26
DDX49-214ENST00000629999 FLOT1O75955 427 aa16.7■□□□□ 0.26
DDX49-214ENST00000629999 HMGCS2P54868 508 aa16.7■□□□□ 0.26
DDX49-214ENST00000629999 VGLL4Q14135 290 aa16.7■□□□□ 0.26
DDX49-214ENST00000629999 NOL9Q5SY16 702 aaKnown RBP16.7■□□□□ 0.26
DDX49-214ENST00000629999 IQCA1LA6NCM1 817 aa16.69■□□□□ 0.26
DDX49-214ENST00000629999 MEIS2O14770 477 aa16.69■□□□□ 0.26
DDX49-214ENST00000629999 PPP1R12BO60237 982 aaPredicted RBP16.69■□□□□ 0.26
DDX49-214ENST00000629999 TDP2O95551 362 aa16.69■□□□□ 0.26
DDX49-214ENST00000629999 HOXA13P31271 388 aaPredicted RBP16.69■□□□□ 0.26
DDX49-214ENST00000629999 LONRF3Q496Y0 759 aa16.69■□□□□ 0.26
DDX49-214ENST00000629999 ARL6IP4Q66PJ3 421 aaKnown RBP16.69■□□□□ 0.26
DDX49-214ENST00000629999 POTEDQ86YR6 584 aa16.69■□□□□ 0.26
DDX49-214ENST00000629999 CDCA5Q96FF9 252 aa16.69■□□□□ 0.26
DDX49-214ENST00000629999 ANO3Q9BYT9 981 aa16.69■□□□□ 0.26
DDX49-214ENST00000629999 A0A087WWV3 80 aa16.68■□□□□ 0.26
DDX49-214ENST00000629999 OPLAHO14841 1288 aa16.68■□□□□ 0.26
DDX49-214ENST00000629999 OR52Z1P0C646 297 aa16.68■□□□□ 0.26
DDX49-214ENST00000629999 MAP3K9P80192 1104 aa16.68■□□□□ 0.26
DDX49-214ENST00000629999 TTLL12Q14166 644 aaPredicted RBP16.68■□□□□ 0.26
DDX49-214ENST00000629999 DTHD1Q6ZMT9 781 aa16.68■□□□□ 0.26
DDX49-214ENST00000629999 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.68■□□□□ 0.26
DDX49-214ENST00000629999 TEX2Q8IWB9 1127 aa16.68■□□□□ 0.26
DDX49-214ENST00000629999 PRPF38AQ8NAV1 312 aaKnown RBP16.68■□□□□ 0.26
DDX49-214ENST00000629999 CNNM3Q8NE01 707 aa16.68■□□□□ 0.26
DDX49-214ENST00000629999 SNCAIPQ9Y6H5 919 aa16.68■□□□□ 0.26
DDX49-214ENST00000629999 SLC37A4O43826 429 aa16.68■□□□□ 0.26
DDX49-214ENST00000629999 KRBA2Q6ZNG9 492 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms