RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 GRIN2DO15399 1336 aa24.01■■□□□ 1.43
TARDBP-228ENST00000629725 B4GALT4O60513 344 aa24■■□□□ 1.43
TARDBP-228ENST00000629725 PRDM1O75626 825 aa24■■□□□ 1.43
TARDBP-228ENST00000629725 SLFN13Q68D06 897 aa24■■□□□ 1.43
TARDBP-228ENST00000629725 MICALL1Q8N3F8 863 aa24■■□□□ 1.43
TARDBP-228ENST00000629725 TRPV6Q9H1D0 765 aa24■■□□□ 1.43
TARDBP-228ENST00000629725 A1CFQ9NQ94 594 aaKnown RBP24■■□□□ 1.43
TARDBP-228ENST00000629725 LRRC37A2A6NM11 1700 aa23.99■■□□□ 1.43
TARDBP-228ENST00000629725 SOWAHBA6NEL2 793 aa23.99■■□□□ 1.43
TARDBP-228ENST00000629725 TMEM232C9JQI7 657 aa23.99■■□□□ 1.43
TARDBP-228ENST00000629725 DYNC1LI2O43237 492 aaPredicted RBP23.99■■□□□ 1.43
TARDBP-228ENST00000629725 PLA2G5P39877 138 aa23.99■■□□□ 1.43
TARDBP-228ENST00000629725 TDO2P48775 406 aa23.99■■□□□ 1.43
TARDBP-228ENST00000629725 STAT2P52630 851 aa23.99■■□□□ 1.43
TARDBP-228ENST00000629725 OSBP2Q969R2 916 aa23.99■■□□□ 1.43
TARDBP-228ENST00000629725 WNT8AQ9H1J5 351 aa23.99■■□□□ 1.43
TARDBP-228ENST00000629725 RNF146Q9NTX7 359 aa23.99■■□□□ 1.43
TARDBP-228ENST00000629725 ISY1Q9ULR0 285 aaKnown RBP23.99■■□□□ 1.43
TARDBP-228ENST00000629725 PCDHA11Q9Y5I1 949 aa23.99■■□□□ 1.43
TARDBP-228ENST00000629725 MYOGP15173 224 aa23.98■■□□□ 1.43
TARDBP-228ENST00000629725 SMPD1P17405 629 aa23.98■■□□□ 1.43
TARDBP-228ENST00000629725 APPBP2Q92624 585 aa23.98■■□□□ 1.43
TARDBP-228ENST00000629725 AGBL1Q96MI9 1066 aa23.98■■□□□ 1.43
TARDBP-228ENST00000629725 LRRCC1Q9C099 1032 aa23.98■■□□□ 1.43
TARDBP-228ENST00000629725 ZBBXA8MT70 800 aa23.97■■□□□ 1.43
TARDBP-228ENST00000629725 ZNF536O15090 1300 aa23.97■■□□□ 1.43
TARDBP-228ENST00000629725 APPP05067 770 aa23.97■■□□□ 1.43
TARDBP-228ENST00000629725 BMP1P13497 986 aa23.97■■□□□ 1.43
TARDBP-228ENST00000629725 PTGS1P23219 599 aa23.97■■□□□ 1.43
TARDBP-228ENST00000629725 IKQ13123 557 aaPredicted RBP23.97■■□□□ 1.43
TARDBP-228ENST00000629725 IQSEC1Q6DN90 963 aa23.97■■□□□ 1.43
TARDBP-228ENST00000629725 CHURC1Q8WUH1 139 aa23.97■■□□□ 1.43
TARDBP-228ENST00000629725 FAM122AQ96E09 287 aa23.97■■□□□ 1.43
TARDBP-228ENST00000629725 NECAB3Q96P71 396 aaPredicted RBP23.97■■□□□ 1.43
TARDBP-228ENST00000629725 TRERF1Q96PN7 1200 aa23.97■■□□□ 1.43
TARDBP-228ENST00000629725 EPB41L4AQ9HCS5 686 aaPredicted RBP23.97■■□□□ 1.43
TARDBP-228ENST00000629725 Q9Y3F1 56 aa23.97■■□□□ 1.43
TARDBP-228ENST00000629725 TSPY3P0CV98 308 aa23.96■■□□□ 1.43
TARDBP-228ENST00000629725 TSPY8P0CW00 308 aa23.96■■□□□ 1.43
TARDBP-228ENST00000629725 ATP2A2P16615 1042 aaKnown RBP23.96■■□□□ 1.43
TARDBP-228ENST00000629725 GNAT2P19087 354 aa23.96■■□□□ 1.43
TARDBP-228ENST00000629725 PSMC6P62333 389 aa23.96■■□□□ 1.43
TARDBP-228ENST00000629725 TFF2Q03403 129 aa23.96■■□□□ 1.43
TARDBP-228ENST00000629725 AAK1Q2M2I8 961 aa23.96■■□□□ 1.43
TARDBP-228ENST00000629725 TKFCQ3LXA3 575 aa23.96■■□□□ 1.43
TARDBP-228ENST00000629725 EEPD1Q7L9B9 569 aa23.96■■□□□ 1.43
TARDBP-228ENST00000629725 FAM160B2Q86V87 743 aa23.96■■□□□ 1.43
TARDBP-228ENST00000629725 KBTBD3Q8NAB2 608 aa23.96■■□□□ 1.43
TARDBP-228ENST00000629725 SCLYQ96I15 445 aa23.96■■□□□ 1.43
TARDBP-228ENST00000629725 PDGFCQ9NRA1 345 aa23.96■■□□□ 1.43
TARDBP-228ENST00000629725 PLIN4Q96Q06 1357 aa23.95■■□□□ 1.42
TARDBP-228ENST00000629725 GPAA1O43292 621 aa23.95■■□□□ 1.42
TARDBP-228ENST00000629725 ALAS1P13196 640 aa23.95■■□□□ 1.42
TARDBP-228ENST00000629725 TAPT1Q6NXT6 567 aa23.95■■□□□ 1.42
TARDBP-228ENST00000629725 FBXO16Q8IX29 292 aaPredicted RBP23.95■■□□□ 1.42
TARDBP-228ENST00000629725 STAG1Q8WVM7 1258 aa23.95■■□□□ 1.42
TARDBP-228ENST00000629725 C1QTNF1Q9BXJ1 281 aa23.95■■□□□ 1.42
TARDBP-228ENST00000629725 ECHDC1Q9NTX5 307 aa23.95■■□□□ 1.42
TARDBP-228ENST00000629725 DDX49Q9Y6V7 483 aaKnown RBP23.95■■□□□ 1.42
TARDBP-228ENST00000629725 RNF113AO15541 343 aaKnown RBP23.94■■□□□ 1.42
TARDBP-228ENST00000629725 SMARCA5O60264 1052 aaPredicted RBP23.94■■□□□ 1.42
TARDBP-228ENST00000629725 SLC1A4P43007 532 aa23.94■■□□□ 1.42
TARDBP-228ENST00000629725 SKIV2LQ15477 1246 aaKnown RBP23.94■■□□□ 1.42
TARDBP-228ENST00000629725 NEDD1Q8NHV4 660 aa23.94■■□□□ 1.42
TARDBP-228ENST00000629725 VWCEQ96DN2 955 aa23.94■■□□□ 1.42
TARDBP-228ENST00000629725 GMCL1Q96IK5 515 aa23.94■■□□□ 1.42
TARDBP-228ENST00000629725 ALDH8A1Q9H2A2 487 aaPredicted RBP23.94■■□□□ 1.42
TARDBP-228ENST00000629725 CHMP4BQ9H444 224 aaKnown RBP23.94■■□□□ 1.42
TARDBP-228ENST00000629725 PRRC2BQ5JSZ5 2229 aaKnown RBP23.94■■□□□ 1.42
TARDBP-228ENST00000629725 PFKMP08237 780 aa23.93■■□□□ 1.42
TARDBP-228ENST00000629725 PDE4BQ07343 736 aa23.93■■□□□ 1.42
TARDBP-228ENST00000629725 CHMP4CQ96CF2 233 aa23.93■■□□□ 1.42
TARDBP-228ENST00000629725 CYP39A1Q9NYL5 469 aa23.93■■□□□ 1.42
TARDBP-228ENST00000629725 SCN5AQ14524 2016 aa23.93■■□□□ 1.42
TARDBP-228ENST00000629725 LCTP09848 1927 aa23.92■■□□□ 1.42
TARDBP-228ENST00000629725 PATL2C9JE40 543 aaKnown RBP23.92■■□□□ 1.42
TARDBP-228ENST00000629725 ERC2O15083 957 aa23.92■■□□□ 1.42
TARDBP-228ENST00000629725 ZFYP08048 801 aaPredicted RBP23.92■■□□□ 1.42
TARDBP-228ENST00000629725 SUPT20HL2P0C7V6 817 aa23.92■■□□□ 1.42
TARDBP-228ENST00000629725 KCNQ1P51787 676 aa23.92■■□□□ 1.42
TARDBP-228ENST00000629725 TFAP4Q01664 338 aa23.92■■□□□ 1.42
TARDBP-228ENST00000629725 TMEM67Q5HYA8 995 aa23.92■■□□□ 1.42
TARDBP-228ENST00000629725 TMEM63BQ5T3F8 832 aa23.92■■□□□ 1.42
TARDBP-228ENST00000629725 KIAA1211Q6ZU35 1233 aa23.92■■□□□ 1.42
TARDBP-228ENST00000629725 IFNL3Q8IZI9 196 aa23.92■■□□□ 1.42
TARDBP-228ENST00000629725 VTA1Q9NP79 307 aa23.92■■□□□ 1.42
TARDBP-228ENST00000629725 M0R2C6 588 aa23.91■■□□□ 1.42
TARDBP-228ENST00000629725 GTPBP6O43824 516 aaPredicted RBP23.91■■□□□ 1.42
TARDBP-228ENST00000629725 PLA2G6O60733 806 aa23.91■■□□□ 1.42
TARDBP-228ENST00000629725 CA3P07451 260 aa23.91■■□□□ 1.42
TARDBP-228ENST00000629725 MCCP23508 829 aa23.91■■□□□ 1.42
TARDBP-228ENST00000629725 TTLL4Q14679 1199 aa23.91■■□□□ 1.42
TARDBP-228ENST00000629725 MUM1L1Q5H9M0 696 aa23.91■■□□□ 1.42
TARDBP-228ENST00000629725 TRMT13Q9NUP7 481 aaKnown RBP23.91■■□□□ 1.42
TARDBP-228ENST00000629725 SLC3A2P08195 630 aaKnown RBP23.9■■□□□ 1.42
TARDBP-228ENST00000629725 CYP2C9P11712 490 aa23.9■■□□□ 1.42
TARDBP-228ENST00000629725 POU3F3P20264 500 aaPredicted RBP23.9■■□□□ 1.42
TARDBP-228ENST00000629725 KCTD1Q719H9 257 aa23.9■■□□□ 1.42
TARDBP-228ENST00000629725 DEFB128Q7Z7B8 93 aa23.9■■□□□ 1.42
TARDBP-228ENST00000629725 NACAP1Q9BZK3 213 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms