RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 PTPREP23469 700 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 POLR2FP61218 127 aaKnown RBP12.86□□□□□ -0.35
SHPRH-211ENST00000629427 LRCH2Q5VUJ6 765 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 NOSTRINQ8IVI9 506 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 CABS1Q96KC9 395 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 COL4A3BPQ9Y5P4 624 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 MAD1L1Q9Y6D9 718 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 ZNF804BA4D1E1 1349 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 RABGAP1Q9Y3P9 1069 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 THAP12O43422 761 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 TSNAXIP1Q2TAA8 658 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 KCTD1Q719H9 257 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 RNF10Q8N5U6 811 aaKnown RBP12.86□□□□□ -0.35
SHPRH-211ENST00000629427 BZW2Q9Y6E2 419 aaKnown RBP12.86□□□□□ -0.35
SHPRH-211ENST00000629427 NUP153P49790 1475 aaKnown RBP12.86□□□□□ -0.35
SHPRH-211ENST00000629427 H7C0C1 242 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 SCG2P13521 617 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 ATP5OP48047 213 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 RASSF2P50749 326 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 METTL23Q86XA0 190 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 HDAC11Q96DB2 347 aa12.86□□□□□ -0.35
SHPRH-211ENST00000629427 ARHGAP42A6NI28 874 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 TFDP1Q14186 410 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 KIAA1841Q6NSI8 718 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 TRIM58Q8NG06 486 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 HVCN1Q96D96 273 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 IQCDQ96DY2 449 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 GDAP1L1Q96MZ0 367 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 BCAP29Q9UHQ4 241 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 KCTD2Q14681 263 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 FANCBQ8NB91 859 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 ZNF577Q9BSK1 485 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 CTNNA1P35221 906 aaKnown RBP12.85□□□□□ -0.35
SHPRH-211ENST00000629427 CCNA1P78396 465 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 RSRC2Q7L4I2 434 aaKnown RBP12.85□□□□□ -0.35
SHPRH-211ENST00000629427 RETREG2Q8NC44 543 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 ZNF274Q96GC6 653 aaPredicted RBP12.85□□□□□ -0.35
SHPRH-211ENST00000629427 SMYD2Q9NRG4 433 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 TYW1Q9NV66 732 aaKnown RBP12.85□□□□□ -0.35
SHPRH-211ENST00000629427 LARSQ9P2J5 1176 aaKnown RBP12.85□□□□□ -0.35
SHPRH-211ENST00000629427 PCDHA1Q9Y5I3 950 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 GOLGA8CPA6NN73 597 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 XPOTO43592 962 aaKnown RBP12.85□□□□□ -0.35
SHPRH-211ENST00000629427 ARHGAP4P98171 946 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 PNMA8AQ86V59 439 aaPredicted RBP12.85□□□□□ -0.35
SHPRH-211ENST00000629427 OR8K1Q8NGG5 319 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 TNKSO95271 1327 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 BICRAQ9NZM4 1560 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 SPDYE2BA6NHP3 402 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 S100BP04271 92 aaPredicted RBP12.85□□□□□ -0.35
SHPRH-211ENST00000629427 RPN1P04843 607 aaKnown RBP12.85□□□□□ -0.35
SHPRH-211ENST00000629427 SPDYE6P0CI01 402 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 PDE6AP16499 860 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 RFC1P35251 1148 aaPredicted RBP12.85□□□□□ -0.35
SHPRH-211ENST00000629427 ATP10AO60312 1499 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 SLC4A1P02730 911 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 UBXN2AP68543 259 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.85□□□□□ -0.35
SHPRH-211ENST00000629427 XPO4Q9C0E2 1151 aaKnown RBP12.85□□□□□ -0.35
SHPRH-211ENST00000629427 PTPN22Q9Y2R2 807 aa12.85□□□□□ -0.35
SHPRH-211ENST00000629427 SGK1O00141 431 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 PFKFB1P16118 471 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 ADAM9Q13443 819 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 MMEL1Q495T6 779 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 ADALQ6DHV7 355 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 FAM114A2Q9NRY5 505 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 CPSF3Q9UKF6 684 aaKnown RBP12.84□□□□□ -0.35
SHPRH-211ENST00000629427 GARSP41250 739 aaKnown RBP12.84□□□□□ -0.35
SHPRH-211ENST00000629427 MYL7Q01449 175 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 MIS18BP1Q6P0N0 1132 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 TESK2Q96S53 571 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 SNX25Q9H3E2 840 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 BAG5Q9UL15 447 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 ZNF853P0CG23 659 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 BFSP1Q12934 665 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 MKRN3Q13064 507 aaKnown RBP12.84□□□□□ -0.35
SHPRH-211ENST00000629427 PTGDRQ13258 359 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 PDE1CQ14123 709 aaPredicted RBP12.84□□□□□ -0.35
SHPRH-211ENST00000629427 GALNT17Q6IS24 598 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 MAGED2Q9UNF1 606 aaPredicted RBP12.84□□□□□ -0.35
SHPRH-211ENST00000629427 KIAA1024Q9UPX6 916 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 RNF40O75150 1001 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 PHKG2P15735 406 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 USPL1Q5W0Q7 1092 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 C17orf53Q8N3J3 647 aaPredicted RBP12.84□□□□□ -0.35
SHPRH-211ENST00000629427 ABT1Q9ULW3 272 aaKnown RBP12.84□□□□□ -0.35
SHPRH-211ENST00000629427 ZNF148Q9UQR1 794 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 ZSCAN20P17040 1043 aaPredicted RBP12.84□□□□□ -0.35
SHPRH-211ENST00000629427 ADD1P35611 737 aaKnown RBP12.84□□□□□ -0.35
SHPRH-211ENST00000629427 PPFIA1Q13136 1202 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 LRRC24Q50LG9 513 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 ARMC9Q7Z3E5 817 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.84□□□□□ -0.35
SHPRH-211ENST00000629427 UBN1Q9NPG3 1134 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 ATP7AQ04656 1500 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 CASP2P42575 452 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 DDX27Q96GQ7 796 aaKnown RBP12.84□□□□□ -0.35
SHPRH-211ENST00000629427 KIAA1468Q9P260 1216 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 PNMA2Q9UL42 364 aa12.84□□□□□ -0.35
SHPRH-211ENST00000629427 INO80B-WBP1J3KQ70 363 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms