RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 GPRC5AQ8NFJ5 357 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 ALKBH8Q96BT7 664 aaKnown RBP5.79□□□□□ -1.48
LINC00550-201ENST00000629293 SENP6Q9GZR1 1112 aaPredicted RBP5.79□□□□□ -1.48
LINC00550-201ENST00000629293 OSBPL3Q9H4L5 887 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 PI4KBQ9UBF8 816 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 MYH2Q9UKX2 1941 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 MYH13Q9UKX3 1938 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 MAGEB6P1A0A0J9YX57 407 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 SMARCA5O60264 1052 aaPredicted RBP5.79□□□□□ -1.48
LINC00550-201ENST00000629293 GH2P01242 217 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 CCND3P30281 292 aaPredicted RBP5.79□□□□□ -1.48
LINC00550-201ENST00000629293 USP5P45974 858 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 BACE1P56817 501 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 COPS2P61201 443 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 DYNLL1P63167 89 aaKnown RBP5.79□□□□□ -1.48
LINC00550-201ENST00000629293 SH3BP2P78314 561 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 JAG1P78504 1218 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 DAB2P98082 770 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 CCDC158Q5M9N0 1113 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 GIMAP6Q6P9H5 292 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 DBNDD2Q9BQY9 259 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 PRDM5Q9NQX1 630 aaPredicted RBP5.79□□□□□ -1.48
LINC00550-201ENST00000629293 MPHOSPH10O00566 681 aaKnown RBP5.78□□□□□ -1.48
LINC00550-201ENST00000629293 SCAMP3O14828 347 aaKnown RBP5.78□□□□□ -1.48
LINC00550-201ENST00000629293 SURF6O75683 361 aaKnown RBP5.78□□□□□ -1.48
LINC00550-201ENST00000629293 GNAI2P04899 355 aa5.78□□□□□ -1.48
LINC00550-201ENST00000629293 CYP7A1P22680 504 aa5.78□□□□□ -1.48
LINC00550-201ENST00000629293 MARVELD3Q96A59 401 aa5.78□□□□□ -1.48
LINC00550-201ENST00000629293 HINFPQ9BQA5 517 aa5.78□□□□□ -1.48
LINC00550-201ENST00000629293 CCDC8Q9H0W5 538 aaPredicted RBP5.78□□□□□ -1.48
LINC00550-201ENST00000629293 GJD2Q9UKL4 321 aa5.78□□□□□ -1.48
LINC00550-201ENST00000629293 LRFN2Q9ULH4 789 aa5.78□□□□□ -1.48
LINC00550-201ENST00000629293 HLA-DOAP06340 250 aa5.78□□□□□ -1.48
LINC00550-201ENST00000629293 NUCB1Q02818 461 aa5.78□□□□□ -1.48
LINC00550-201ENST00000629293 CACNB2Q08289 660 aaPredicted RBP5.78□□□□□ -1.48
LINC00550-201ENST00000629293 COX20Q5RI15 118 aa5.78□□□□□ -1.48
LINC00550-201ENST00000629293 TDHQ8IZJ6 230 aa5.78□□□□□ -1.48
LINC00550-201ENST00000629293 FAM163AQ96GL9 167 aaPredicted RBP5.78□□□□□ -1.48
LINC00550-201ENST00000629293 LBHD1Q9BQE6 289 aaPredicted RBP5.78□□□□□ -1.48
LINC00550-201ENST00000629293 PRKAG2Q9UGJ0 569 aa5.78□□□□□ -1.48
LINC00550-201ENST00000629293 SLC45A1Q9Y2W3 748 aa5.78□□□□□ -1.48
LINC00550-201ENST00000629293 ZBTB39O15060 712 aa5.78□□□□□ -1.48
LINC00550-201ENST00000629293 CYP2C19P33261 490 aa5.78□□□□□ -1.48
LINC00550-201ENST00000629293 ZAP70P43403 619 aa5.78□□□□□ -1.48
LINC00550-201ENST00000629293 ERVK-24P63145 666 aa5.78□□□□□ -1.48
LINC00550-201ENST00000629293 PLS1Q14651 629 aa5.78□□□□□ -1.48
LINC00550-201ENST00000629293 ADGRA1Q86SQ6 560 aa5.78□□□□□ -1.48
LINC00550-201ENST00000629293 ANKK1Q8NFD2 765 aa5.78□□□□□ -1.48
LINC00550-201ENST00000629293 GDF15Q99988 308 aa5.78□□□□□ -1.48
LINC00550-201ENST00000629293 TSPAN10Q9H1Z9 355 aaPredicted RBP5.78□□□□□ -1.48
LINC00550-201ENST00000629293 PRO3102Q9H379 93 aa5.78□□□□□ -1.48
LINC00550-201ENST00000629293 HERC5Q9UII4 1024 aaKnown RBP5.78□□□□□ -1.48
LINC00550-201ENST00000629293 ZBTB21Q9ULJ3 1066 aa5.78□□□□□ -1.48
LINC00550-201ENST00000629293 ATP11BQ9Y2G3 1177 aa5.78□□□□□ -1.48
LINC00550-201ENST00000629293 NBPF20Q3BBV1 942 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 RNF20Q5VTR2 975 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 GPR142Q7Z601 462 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 PLEKHH3Q7Z736 793 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 BPHLQ86WA6 291 aaPredicted RBP5.77□□□□□ -1.49
LINC00550-201ENST00000629293 FERMT2Q96AC1 680 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 HS3ST6Q96QI5 342 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 ANTXR1Q9H6X2 564 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 RBPJLQ9UBG7 517 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 PARP2Q9UGN5 583 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 PFASO15067 1338 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 FLT1P17948 1338 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 RBBP6Q7Z6E9 1792 aaKnown RBP5.77□□□□□ -1.49
LINC00550-201ENST00000629293 UQCRFS1P1P0C7P4 283 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 ERCC5P28715 1186 aaPredicted RBP5.77□□□□□ -1.49
LINC00550-201ENST00000629293 RGS2P41220 211 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 ATP2B2Q01814 1243 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 LRRC26Q2I0M4 334 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 LINC01559Q495D7 138 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 C2orf49Q9BVC5 232 aaPredicted RBP5.77□□□□□ -1.49
LINC00550-201ENST00000629293 DHX36Q9H2U1 1008 aaKnown RBP5.77□□□□□ -1.49
LINC00550-201ENST00000629293 DNAJC18Q9H819 358 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 POTEMA6NI47 508 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 ERVH48-1M5A8F1 160 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 CYP2E1P05181 493 aaPredicted RBP5.77□□□□□ -1.49
LINC00550-201ENST00000629293 CTSHP09668 335 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 MAP3K10Q02779 954 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 EHHADHQ08426 723 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 BECN1Q14457 450 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 TJAP1Q5JTD0 557 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 DPP9Q86TI2 863 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 MAGEB6Q8N7X4 407 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 ACER1Q8TDN7 264 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 SOCS4Q8WXH5 440 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 EDC3Q96F86 508 aaKnown RBP5.77□□□□□ -1.49
LINC00550-201ENST00000629293 TANGO6Q9C0B7 1094 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 TLR7Q9NYK1 1049 aaKnown RBP5.77□□□□□ -1.49
LINC00550-201ENST00000629293 HRH3Q9Y5N1 445 aa5.77□□□□□ -1.49
LINC00550-201ENST00000629293 FAM13AO94988 1023 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 POLR3DP05423 398 aaPredicted RBP5.76□□□□□ -1.49
LINC00550-201ENST00000629293 MAPK4P31152 587 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 TNNI3KQ59H18 835 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 GJC2Q5T442 439 aaPredicted RBP5.76□□□□□ -1.49
LINC00550-201ENST00000629293 MFSD14CQ5VZR4 134 aa5.76□□□□□ -1.49
LINC00550-201ENST00000629293 CHMP4BQ9H444 224 aaKnown RBP5.76□□□□□ -1.49
LINC00550-201ENST00000629293 UPF2Q9HAU5 1272 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms