RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 TRERF1Q96PN7 1200 aa8.42□□□□□ -1.06
PKP4-217ENST00000628904 COA1Q9GZY4 146 aa8.42□□□□□ -1.06
PKP4-217ENST00000628904 JADE2Q9NQC1 790 aa8.42□□□□□ -1.06
PKP4-217ENST00000628904 ALAS1P13196 640 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 KLK7P49862 253 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 TERF1P54274 439 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 MYRIPQ8NFW9 859 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 IL17RAQ96F46 866 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 PPP1R13BQ96KQ4 1090 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 RAB34Q9BZG1 259 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.41□□□□□ -1.06
PKP4-217ENST00000628904 MTMR4Q9NYA4 1195 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 COL1A1P02452 1464 aaPredicted RBP8.41□□□□□ -1.06
PKP4-217ENST00000628904 TRPM3Q9HCF6 1732 aaPredicted RBP8.41□□□□□ -1.06
PKP4-217ENST00000628904 MARF1Q9Y4F3 1742 aaKnown RBP8.41□□□□□ -1.06
PKP4-217ENST00000628904 SHTN1A0MZ66 631 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 F5H6K3 240 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 AKR1B10O60218 316 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 KIF5CO60282 957 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 PDHBP11177 359 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 KLRC3Q07444 240 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 CCDC155Q8N6L0 562 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 TBC1D5Q92609 795 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 ZNF408Q9H9D4 720 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 TMCO5BA8MYB1 307 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 SLC37A4O43826 429 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 ORC4O43929 436 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 CDC37Q16543 378 aaPredicted RBP8.41□□□□□ -1.06
PKP4-217ENST00000628904 QRICH1Q2TAL8 776 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 FAM83BQ5T0W9 1011 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 CYP2W1Q8TAV3 490 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 ACER1Q8TDN7 264 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 PCDHB13Q9Y5F0 798 aa8.41□□□□□ -1.06
PKP4-217ENST00000628904 BCL9LQ86UU0 1499 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 POTEB3A0JP26 581 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 POTECB2RU33 542 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 CLIC2O15247 247 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 ZSCAN12O43309 604 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 ACTN4O43707 911 aaKnown RBP8.4□□□□□ -1.06
PKP4-217ENST00000628904 ZMYND10O75800 440 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 BMP15O95972 392 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 TNNT3P45378 269 aaPredicted RBP8.4□□□□□ -1.06
PKP4-217ENST00000628904 NCAPHQ15003 741 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 POTEBQ6S5H4 581 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 KRT25Q7Z3Z0 450 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 DNAAF5Q86Y56 855 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 HOMEZQ8IX15 550 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 NUDT12Q9BQG2 462 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 DISC1Q9NRI5 854 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 BARHL2Q9NY43 387 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 PAXBP1Q9Y5B6 917 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 ROBO1Q9Y6N7 1651 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 POTEFA5A3E0 1075 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 RBAK-RBAKDNI3L0D1 243 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 DYNC1I1O14576 645 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 POTEIP0CG38 1075 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 STK4Q13043 487 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 GRM1Q13255 1194 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 RAPGEF1Q13905 1077 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 POTEGQ6S5H5 508 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 POTEEQ6S8J3 1075 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 SAMD7Q7Z3H4 446 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 SP8Q8IXZ3 490 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 NEDD1Q8NHV4 660 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 SPTLC3Q9NUV7 552 aa8.4□□□□□ -1.06
PKP4-217ENST00000628904 LUC7L2Q9Y383 392 aaKnown RBP8.4□□□□□ -1.06
PKP4-217ENST00000628904 ALS2Q96Q42 1657 aa8.4□□□□□ -1.07
PKP4-217ENST00000628904 GPR75-ASB3A0A0A6YYF3 556 aa8.4□□□□□ -1.07
PKP4-217ENST00000628904 A0A0U1RQG5 324 aaPredicted RBP8.4□□□□□ -1.07
PKP4-217ENST00000628904 STXBP3O00186 592 aa8.4□□□□□ -1.07
PKP4-217ENST00000628904 DPYDQ12882 1025 aa8.4□□□□□ -1.07
PKP4-217ENST00000628904 CTTNQ14247 550 aaKnown RBP8.4□□□□□ -1.07
PKP4-217ENST00000628904 GRM4Q14833 912 aa8.4□□□□□ -1.07
PKP4-217ENST00000628904 KRT31Q15323 416 aa8.4□□□□□ -1.07
PKP4-217ENST00000628904 SYCP1Q15431 976 aa8.4□□□□□ -1.07
PKP4-217ENST00000628904 IL17AQ16552 155 aa8.4□□□□□ -1.07
PKP4-217ENST00000628904 E4F1Q66K89 784 aaPredicted RBP8.4□□□□□ -1.07
PKP4-217ENST00000628904 DLK2Q6UY11 383 aa8.4□□□□□ -1.07
PKP4-217ENST00000628904 EEPD1Q7L9B9 569 aa8.4□□□□□ -1.07
PKP4-217ENST00000628904 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.4□□□□□ -1.07
PKP4-217ENST00000628904 KSR1Q8IVT5 923 aa8.4□□□□□ -1.07
PKP4-217ENST00000628904 LRRN4CLQ8ND94 238 aa8.4□□□□□ -1.07
PKP4-217ENST00000628904 GLIS3Q8NEA6 775 aa8.4□□□□□ -1.07
PKP4-217ENST00000628904 PRIMPOLQ96LW4 560 aa8.4□□□□□ -1.07
PKP4-217ENST00000628904 ZMYND15Q9H091 742 aa8.4□□□□□ -1.07
PKP4-217ENST00000628904 OSBPL5Q9H0X9 879 aaPredicted RBP8.4□□□□□ -1.07
PKP4-217ENST00000628904 TRIM10Q9UDY6 481 aa8.4□□□□□ -1.07
PKP4-217ENST00000628904 HDAC9Q9UKV0 1011 aa8.4□□□□□ -1.07
PKP4-217ENST00000628904 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.4□□□□□ -1.071e-6■■■■□ 23.2
PKP4-217ENST00000628904 PPP2R2CQ9Y2T4 447 aa8.4□□□□□ -1.07
PKP4-217ENST00000628904 SCN11AQ9UI33 1791 aa8.4□□□□□ -1.07
PKP4-217ENST00000628904 PMS1P54277 932 aaKnown RBP8.39□□□□□ -1.07
PKP4-217ENST00000628904 RHBDL3P58872 404 aa8.39□□□□□ -1.07
PKP4-217ENST00000628904 CCZ1BP86790 482 aa8.39□□□□□ -1.07
PKP4-217ENST00000628904 CCZ1P86791 482 aaPredicted RBP8.39□□□□□ -1.07
PKP4-217ENST00000628904 AMPD3Q01432 767 aa8.39□□□□□ -1.07
PKP4-217ENST00000628904 PPP2R5BQ15173 497 aa8.39□□□□□ -1.07
PKP4-217ENST00000628904 GPBP1Q86WP2 473 aa8.39□□□□□ -1.07
PKP4-217ENST00000628904 NIM1KQ8IY84 436 aa8.39□□□□□ -1.07
PKP4-217ENST00000628904 SYCP3Q8IZU3 236 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms