RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 SCG2P13521 617 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 EEF2P13639 858 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 XBP1P17861 261 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 UBE2HP62256 183 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 PRKCZQ05513 592 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 NR5A1Q13285 461 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 GADL1Q6ZQY3 521 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 TMEM179Q6ZVK1 233 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 DIS3L2Q8IYB7 885 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 TNFRSF25Q93038 417 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 SPZ1Q9BXG8 430 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 SCAND2PQ9GZW5 306 aaPredicted RBP10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 NYAP2Q9P242 653 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 RCOR1Q9UKL0 485 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 CFAP45Q9UL16 551 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 A0A1W2PPC1 479 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 MBD3O95983 291 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 GH2P01242 217 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 PARP1P09874 1014 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 CYP2C8P10632 490 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 TOB1P50616 345 aaPredicted RBP10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 CEBPZQ03701 1054 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 PABPC4Q13310 644 aaKnown RBP eCLIP10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 GNL2Q13823 731 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 ABCB5Q2M3G0 1257 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 EARS2Q5JPH6 523 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 ATL3Q6DD88 541 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 SMCR8Q8TEV9 937 aaPredicted RBP10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 U2AF1L4Q8WU68 220 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 PIBF1Q8WXW3 757 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 COA7Q96BR5 231 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 SPATA32Q96LK8 384 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 RIOX1Q9H6W3 641 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 KANSL2Q9H9L4 492 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 CLIC4Q9Y696 253 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 FRMPD2Q68DX3 1309 aaPredicted RBP10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 ZSWIM8A7E2V4 1837 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 PHIPQ8WWQ0 1821 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 MGAMO43451 1857 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 SMCHD1A6NHR9 2005 aa10.93□□□□□ -0.66
PDLIM5-223ENST00000627587 DOCK1Q14185 1865 aa10.92□□□□□ -0.66
PDLIM5-223ENST00000627587 A0A1W2PRG0 241 aa10.92□□□□□ -0.66
PDLIM5-223ENST00000627587 FAM205CA6NFA0 338 aa10.92□□□□□ -0.66
PDLIM5-223ENST00000627587 TNPO2O14787 897 aaKnown RBP10.92□□□□□ -0.66
PDLIM5-223ENST00000627587 ECM2O94769 699 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-223ENST00000627587 FARP2O94887 1054 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-223ENST00000627587 NASPP49321 788 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-223ENST00000627587 ZNF543Q08ER8 600 aa10.92□□□□□ -0.66
PDLIM5-223ENST00000627587 GSE1Q14687 1217 aa10.92□□□□□ -0.66
PDLIM5-223ENST00000627587 SAFBQ15424 915 aaKnown RBP eCLIP10.92□□□□□ -0.66
PDLIM5-223ENST00000627587 CAVIN1Q6NZI2 390 aaKnown RBP10.92□□□□□ -0.66
PDLIM5-223ENST00000627587 NOSTRINQ8IVI9 506 aa10.92□□□□□ -0.66
PDLIM5-223ENST00000627587 PROCA1Q8NCQ7 364 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-223ENST00000627587 ZNF396Q96N95 335 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-223ENST00000627587 LZTS2Q9BRK4 669 aa10.92□□□□□ -0.66
PDLIM5-223ENST00000627587 FOXP1Q9H334 677 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-223ENST00000627587 RTEL1Q9NZ71 1219 aa10.92□□□□□ -0.66
PDLIM5-223ENST00000627587 AGTPBP1Q9UPW5 1226 aa10.92□□□□□ -0.66
PDLIM5-223ENST00000627587 TFRCP02786 760 aaKnown RBP10.91□□□□□ -0.66
PDLIM5-223ENST00000627587 SMARCA1P28370 1054 aa10.91□□□□□ -0.66
PDLIM5-223ENST00000627587 GCLCP48506 637 aaPredicted RBP10.91□□□□□ -0.66
PDLIM5-223ENST00000627587 FLT3LGP49771 235 aa10.91□□□□□ -0.66
PDLIM5-223ENST00000627587 ICA1Q05084 483 aa10.91□□□□□ -0.66
PDLIM5-223ENST00000627587 WWC2Q6AWC2 1192 aa10.91□□□□□ -0.66
PDLIM5-223ENST00000627587 TTBK2Q6IQ55 1244 aa10.91□□□□□ -0.66
PDLIM5-223ENST00000627587 LINC00301Q8NCQ3 95 aa10.91□□□□□ -0.66
PDLIM5-223ENST00000627587 GPKOWQ92917 476 aaPredicted RBP eCLIP10.91□□□□□ -0.66
PDLIM5-223ENST00000627587 UBA5Q9GZZ9 404 aa10.91□□□□□ -0.66
PDLIM5-223ENST00000627587 POLR3EQ9NVU0 708 aa10.91□□□□□ -0.66
PDLIM5-223ENST00000627587 GABRQQ9UN88 632 aa10.91□□□□□ -0.66
PDLIM5-223ENST00000627587 M0R2N6 131 aa10.91□□□□□ -0.66
PDLIM5-223ENST00000627587 WNT7AO00755 349 aa10.91□□□□□ -0.66
PDLIM5-223ENST00000627587 ATP2B2Q01814 1243 aa10.91□□□□□ -0.66
PDLIM5-223ENST00000627587 PTPAQ15257 358 aa10.91□□□□□ -0.66
PDLIM5-223ENST00000627587 ASPRV1Q53RT3 343 aa10.91□□□□□ -0.66
PDLIM5-223ENST00000627587 KIAA1755Q5JYT7 1200 aa10.91□□□□□ -0.66
PDLIM5-223ENST00000627587 UNC93B1Q9H1C4 597 aa10.91□□□□□ -0.66
PDLIM5-223ENST00000627587 CABP5Q9NP86 173 aa10.91□□□□□ -0.66
PDLIM5-223ENST00000627587 ZBTB21Q9ULJ3 1066 aa10.91□□□□□ -0.66
PDLIM5-223ENST00000627587 PARP14Q460N5 1801 aa10.9□□□□□ -0.66
PDLIM5-223ENST00000627587 STXBP3O00186 592 aa10.9□□□□□ -0.66
PDLIM5-223ENST00000627587 INHAP05111 366 aa10.9□□□□□ -0.66
PDLIM5-223ENST00000627587 LIG1P18858 919 aa10.9□□□□□ -0.66
PDLIM5-223ENST00000627587 CAP2P40123 477 aa10.9□□□□□ -0.66
PDLIM5-223ENST00000627587 FAM110CQ1W6H9 321 aa10.9□□□□□ -0.66
PDLIM5-223ENST00000627587 ZSCAN23Q3MJ62 389 aa10.9□□□□□ -0.66
PDLIM5-223ENST00000627587 ANKLE1Q8NAG6 615 aa10.9□□□□□ -0.66
PDLIM5-223ENST00000627587 MTMR8Q96EF0 704 aa10.9□□□□□ -0.66
PDLIM5-223ENST00000627587 PIGSQ96S52 555 aa10.9□□□□□ -0.66
PDLIM5-223ENST00000627587 TRIM75PA6NK02 468 aa10.89□□□□□ -0.67
PDLIM5-223ENST00000627587 EVI5O60447 810 aa10.89□□□□□ -0.67
PDLIM5-223ENST00000627587 PPP1R11O60927 126 aaPredicted RBP10.89□□□□□ -0.67
PDLIM5-223ENST00000627587 TPRNQ4KMQ1 711 aa10.89□□□□□ -0.67
PDLIM5-223ENST00000627587 ANO1Q5XXA6 986 aa10.89□□□□□ -0.67
PDLIM5-223ENST00000627587 KCTD1Q719H9 257 aa10.89□□□□□ -0.67
PDLIM5-223ENST00000627587 GAS2L3Q86XJ1 694 aa10.89□□□□□ -0.67
PDLIM5-223ENST00000627587 GMCL1P1Q8NEA9 526 aa10.89□□□□□ -0.67
PDLIM5-223ENST00000627587 ACER1Q8TDN7 264 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms