RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 FARP2O94887 1054 aaPredicted RBP17.09■□□□□ 0.33
PNKP-221ENST00000627317 STAT3P40763 770 aa17.09■□□□□ 0.33
PNKP-221ENST00000627317 AK2P54819 239 aa17.09■□□□□ 0.33
PNKP-221ENST00000627317 OLFML2BQ68BL8 750 aa17.09■□□□□ 0.33
PNKP-221ENST00000627317 NOL8Q76FK4 1167 aaKnown RBP17.09■□□□□ 0.33
PNKP-221ENST00000627317 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.09■□□□□ 0.33
PNKP-221ENST00000627317 NCAPG2Q86XI2 1143 aa17.09■□□□□ 0.33
PNKP-221ENST00000627317 FANCBQ8NB91 859 aa17.09■□□□□ 0.33
PNKP-221ENST00000627317 LARP6Q9BRS8 491 aaKnown RBP17.09■□□□□ 0.33
PNKP-221ENST00000627317 TEX13BQ9BXU2 312 aa17.09■□□□□ 0.33
PNKP-221ENST00000627317 CPVLQ9H3G5 476 aa17.09■□□□□ 0.33
PNKP-221ENST00000627317 RBM28Q9NW13 759 aaKnown RBP17.09■□□□□ 0.33
PNKP-221ENST00000627317 CCND3P30281 292 aaPredicted RBP17.08■□□□□ 0.32
PNKP-221ENST00000627317 LHX8Q68G74 356 aa17.08■□□□□ 0.32
PNKP-221ENST00000627317 TRPV1Q8NER1 839 aa17.08■□□□□ 0.32
PNKP-221ENST00000627317 LZTS2Q9BRK4 669 aa17.08■□□□□ 0.32
PNKP-221ENST00000627317 OGDHLQ9ULD0 1010 aa17.08■□□□□ 0.32
PNKP-221ENST00000627317 RIPK3Q9Y572 518 aa17.08■□□□□ 0.32
PNKP-221ENST00000627317 NID2Q14112 1375 aa17.07■□□□□ 0.32
PNKP-221ENST00000627317 CCDC196A0A1B0GTZ2 297 aa17.07■□□□□ 0.32
PNKP-221ENST00000627317 ST18O60284 1047 aa17.07■□□□□ 0.32
PNKP-221ENST00000627317 PLEKHA8P1O95397 391 aa17.07■□□□□ 0.32
PNKP-221ENST00000627317 FCER1AP12319 257 aa17.07■□□□□ 0.32
PNKP-221ENST00000627317 CYBAP13498 195 aa17.07■□□□□ 0.32
PNKP-221ENST00000627317 CYP2C19P33261 490 aa17.07■□□□□ 0.32
PNKP-221ENST00000627317 COPB2P35606 906 aa17.07■□□□□ 0.32
PNKP-221ENST00000627317 OAZ1P54368 228 aa17.07■□□□□ 0.32
PNKP-221ENST00000627317 EVCP57679 992 aa17.07■□□□□ 0.32
PNKP-221ENST00000627317 SNAP25P60880 206 aa17.07■□□□□ 0.32
PNKP-221ENST00000627317 SNRNP48Q6IEG0 339 aaKnown RBP17.07■□□□□ 0.32
PNKP-221ENST00000627317 CCDC174Q6PII3 467 aa17.07■□□□□ 0.32
PNKP-221ENST00000627317 TMTC3Q6ZXV5 915 aa17.07■□□□□ 0.32
PNKP-221ENST00000627317 ADGRF4Q8IZF3 695 aa17.07■□□□□ 0.32
PNKP-221ENST00000627317 CPXCR1Q8N123 301 aa17.07■□□□□ 0.32
PNKP-221ENST00000627317 ZNF274Q96GC6 653 aaPredicted RBP17.07■□□□□ 0.32
PNKP-221ENST00000627317 RANBP17Q9H2T7 1088 aaKnown RBP17.07■□□□□ 0.32
PNKP-221ENST00000627317 RAVER2Q9HCJ3 691 aaKnown RBP17.07■□□□□ 0.32
PNKP-221ENST00000627317 VAT1LQ9HCJ6 419 aa17.07■□□□□ 0.32
PNKP-221ENST00000627317 RANBP2P49792 3224 aaKnown RBP17.06■□□□□ 0.32
PNKP-221ENST00000627317 ZNF536O15090 1300 aa17.06■□□□□ 0.32
PNKP-221ENST00000627317 PDIA3P30101 505 aaKnown RBP17.06■□□□□ 0.32
PNKP-221ENST00000627317 SLC4A3P48751 1232 aa17.06■□□□□ 0.32
PNKP-221ENST00000627317 STK3Q13188 491 aa17.06■□□□□ 0.32
PNKP-221ENST00000627317 PPP2R5BQ15173 497 aa17.06■□□□□ 0.32
PNKP-221ENST00000627317 CDC37Q16543 378 aaPredicted RBP17.06■□□□□ 0.32
PNKP-221ENST00000627317 MFSD14CQ5VZR4 134 aa17.06■□□□□ 0.32
PNKP-221ENST00000627317 ANKLE1Q8NAG6 615 aa17.06■□□□□ 0.32
PNKP-221ENST00000627317 IL27Q8NEV9 243 aa17.06■□□□□ 0.32
PNKP-221ENST00000627317 DIS3LQ8TF46 1054 aaKnown RBP17.06■□□□□ 0.32
PNKP-221ENST00000627317 MAML3Q96JK9 1138 aa17.06■□□□□ 0.32
PNKP-221ENST00000627317 SPZ1Q9BXG8 430 aa17.06■□□□□ 0.32
PNKP-221ENST00000627317 DNAJC25-GNG10A0A024R161 153 aa17.05■□□□□ 0.32
PNKP-221ENST00000627317 TFRCP02786 760 aaKnown RBP17.05■□□□□ 0.32
PNKP-221ENST00000627317 CCT2P78371 535 aaKnown RBP17.05■□□□□ 0.32
PNKP-221ENST00000627317 ZNF792Q3KQV3 632 aa17.05■□□□□ 0.32
PNKP-221ENST00000627317 DPP9Q86TI2 863 aa17.05■□□□□ 0.32
PNKP-221ENST00000627317 HOMER1Q86YM7 354 aa17.05■□□□□ 0.32
PNKP-221ENST00000627317 MMP19Q99542 508 aa17.05■□□□□ 0.32
PNKP-221ENST00000627317 SLKQ9H2G2 1235 aaPredicted RBP17.05■□□□□ 0.32
PNKP-221ENST00000627317 JMJD4Q9H9V9 463 aa17.05■□□□□ 0.32
PNKP-221ENST00000627317 CCPG1Q9ULG6 757 aa17.05■□□□□ 0.32
PNKP-221ENST00000627317 TPCN1Q9ULQ1 816 aa17.05■□□□□ 0.32
PNKP-221ENST00000627317 ICAM1P05362 532 aa17.04■□□□□ 0.32
PNKP-221ENST00000627317 PGK2P07205 417 aa17.04■□□□□ 0.32
PNKP-221ENST00000627317 CDC27P30260 824 aa17.04■□□□□ 0.32
PNKP-221ENST00000627317 CMTR1Q8N1G2 835 aaKnown RBP17.04■□□□□ 0.32
PNKP-221ENST00000627317 CCDC82Q8N4S0 544 aa17.04■□□□□ 0.32
PNKP-221ENST00000627317 SRBD1Q8N5C6 995 aaKnown RBP17.04■□□□□ 0.32
PNKP-221ENST00000627317 PIBF1Q8WXW3 757 aa17.04■□□□□ 0.32
PNKP-221ENST00000627317 RRP36Q96EU6 259 aaKnown RBP17.04■□□□□ 0.32
PNKP-221ENST00000627317 RIOX1Q9H6W3 641 aa17.04■□□□□ 0.32
PNKP-221ENST00000627317 NCOA5Q9HCD5 579 aaKnown RBP17.04■□□□□ 0.32
PNKP-221ENST00000627317 SEC63Q9UGP8 760 aaKnown RBP17.04■□□□□ 0.32
PNKP-221ENST00000627317 PNMA2Q9UL42 364 aa17.04■□□□□ 0.32
PNKP-221ENST00000627317 DIS3Q9Y2L1 958 aaKnown RBP17.04■□□□□ 0.32
PNKP-221ENST00000627317 BAZ2BQ9UIF8 2168 aaKnown RBP17.04■□□□□ 0.32
PNKP-221ENST00000627317 CNTNAP5Q8WYK1 1306 aa17.03■□□□□ 0.32
PNKP-221ENST00000627317 CPLX1O14810 134 aa17.03■□□□□ 0.32
PNKP-221ENST00000627317 CYTH3O43739 400 aa17.03■□□□□ 0.32
PNKP-221ENST00000627317 COL6A1P12109 1028 aa17.03■□□□□ 0.32
PNKP-221ENST00000627317 SMARCA1P28370 1054 aa17.03■□□□□ 0.32
PNKP-221ENST00000627317 ADD1P35611 737 aaKnown RBP17.03■□□□□ 0.32
PNKP-221ENST00000627317 KCTD2Q14681 263 aa17.03■□□□□ 0.32
PNKP-221ENST00000627317 SLC35G1Q2M3R5 365 aa17.03■□□□□ 0.32
PNKP-221ENST00000627317 QRICH1Q2TAL8 776 aa17.03■□□□□ 0.32
PNKP-221ENST00000627317 CPLX2Q6PUV4 134 aaKnown RBP17.03■□□□□ 0.32
PNKP-221ENST00000627317 PAWRQ96IZ0 340 aaKnown RBP17.03■□□□□ 0.32
PNKP-221ENST00000627317 FGD4Q96M96 766 aa17.03■□□□□ 0.32
PNKP-221ENST00000627317 AGBL1Q96MI9 1066 aa17.03■□□□□ 0.32
PNKP-221ENST00000627317 PIGSQ96S52 555 aa17.03■□□□□ 0.32
PNKP-221ENST00000627317 HOMER2Q9NSB8 354 aa17.03■□□□□ 0.32
PNKP-221ENST00000627317 FAM217BQ9NTX9 383 aaPredicted RBP17.03■□□□□ 0.32
PNKP-221ENST00000627317 LIMCH1Q9UPQ0 1083 aa17.03■□□□□ 0.32
PNKP-221ENST00000627317 CEP290O15078 2479 aa17.03■□□□□ 0.32
PNKP-221ENST00000627317 MYH6P13533 1939 aa17.02■□□□□ 0.32
PNKP-221ENST00000627317 ZBTB5O15062 677 aa17.02■□□□□ 0.32
PNKP-221ENST00000627317 PFKFB2O60825 505 aa17.02■□□□□ 0.32
PNKP-221ENST00000627317 ALAS1P13196 640 aa17.02■□□□□ 0.32
PNKP-221ENST00000627317 TKFCQ3LXA3 575 aa17.02■□□□□ 0.32
PNKP-221ENST00000627317 USH1GQ495M9 461 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms