RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 CCDC84Q86UT8 332 aaPredicted RBP8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 CCAR1Q8IX12 1150 aaKnown RBP8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 KRI1Q8N9T8 703 aaKnown RBP8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 MRPS27Q92552 414 aaKnown RBP8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 ZKSCAN4Q969J2 545 aaPredicted RBP8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 KIFC2Q96AC6 838 aa8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 C12orf42Q96LP6 360 aa8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 GLIS2Q9BZE0 524 aaPredicted RBP8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 RANBP17Q9H2T7 1088 aaKnown RBP8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 PSTPIP2Q9H939 334 aa8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 TMEM63CQ9P1W3 806 aa8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 PNMA2Q9UL42 364 aa8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 PCDHB6Q9Y5E3 794 aa8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 ZHX2Q9Y6X8 837 aa8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 FAM205CA6NFA0 338 aa8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 POTECB2RU33 542 aa8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 VCAM1P19320 739 aa8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 ATP2B1P20020 1258 aa8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 CMA1P23946 247 aa8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 MARCKSP29966 332 aaPredicted RBP8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 CLK2P49760 499 aaKnown RBP8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 ZNF445P59923 1031 aa8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 SPP2Q13103 211 aa8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 MAP3K11Q16584 847 aa8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 ZSCAN23Q3MJ62 389 aa8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 TPRNQ4KMQ1 711 aa8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 ARMC9Q7Z3E5 817 aa8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 IFNLR1Q8IU57 520 aaPredicted RBP8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 ANKRD13AQ8IZ07 590 aa8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 FSIP1Q8NA03 581 aa8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 PRPF38AQ8NAV1 312 aaKnown RBP8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 FERMT2Q96AC1 680 aa8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 FAM212AQ96EL1 285 aa8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 CDCA5Q96FF9 252 aa8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 SLF1Q9BQI6 1058 aa8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 BMP2KQ9NSY1 1161 aaPredicted RBP8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 TMOD4Q9NZQ9 345 aa8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 WDR90Q96KV7 1748 aa8.6□□□□□ -1.03
PTP4A1-206ENST00000627002 MYH4Q9Y623 1939 aa8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 UNCXA6NJT0 531 aa8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 LAD1O00515 517 aa8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 LIG1P18858 919 aa8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 PTPREP23469 700 aa8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 ATN1P54259 1190 aaPredicted RBP8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 ATP2C1P98194 919 aaPredicted RBP8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 FAM160A1Q05DH4 1040 aa8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 AP3B2Q13367 1082 aa8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 PRKG1Q13976 671 aa8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 VGLL4Q14135 290 aa8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 ZNF174Q15697 407 aa8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 INF2Q27J81 1249 aa8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 NOM1Q5C9Z4 860 aaKnown RBP8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 SH3D19Q5HYK7 790 aa8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 AXDND1Q5T1B0 1012 aaPredicted RBP8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 ARL6IP4Q66PJ3 421 aaKnown RBP8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 NEK8Q86SG6 692 aa8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 RASGRP4Q8TDF6 673 aa8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 NAP1L4Q99733 375 aaKnown RBP8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 TANGO6Q9C0B7 1094 aa8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 NUP62CLQ9H1M0 184 aa8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 RPAP3Q9H6T3 665 aaPredicted RBP8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 EMILIN3Q9NT22 766 aa8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 DACT1Q9NYF0 836 aa8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 BIN2Q9UBW5 565 aaPredicted RBP8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 FBXO2Q9UK22 296 aaPredicted RBP8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 MRPL11Q9Y3B7 192 aaKnown RBP8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 AFG3L2Q9Y4W6 797 aa8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 CTDP1Q9Y5B0 961 aaPredicted RBP8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 SRPRBQ9Y5M8 271 aaKnown RBP8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 SNCAIPQ9Y6H5 919 aa8.59□□□□□ -1.03
PTP4A1-206ENST00000627002 ABCB11O95342 1321 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 DOCK1Q14185 1865 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 FAM237AA0A1B0GTK4 181 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 PIK3CDO00329 1044 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 ADAMTS3O15072 1205 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 CTAGE5O15320 804 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 KINO60870 393 aaKnown RBP8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 ZBED4O75132 1171 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 NR1I2O75469 434 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 FLOT1O75955 427 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 FOSP01100 380 aaPredicted RBP8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 ICAM1P05362 532 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 MCM7P33993 719 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 PRPHP41219 470 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 HMGCS2P54868 508 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 SNAP25P60880 206 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 PPATQ06203 517 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 PTGDRQ13258 359 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 TTLL12Q14166 644 aaPredicted RBP8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 USH1GQ495M9 461 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 JAKMIP3Q5VZ66 844 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 RESP18Q5W5W9 173 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 CCDC174Q6PII3 467 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 ERO1BQ86YB8 467 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 SAMD3Q8N6K7 520 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 ENGASEQ8NFI3 743 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 TBCKQ8TEA7 893 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 GOLPH3LQ9H4A5 285 aa8.58□□□□□ -1.04
PTP4A1-206ENST00000627002 CLSTN2Q9H4D0 955 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms