RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 RCSD1Q6JBY9 416 aa17.12■□□□□ 0.33
TUBB3-215ENST00000625617 PSRC1Q6PGN9 363 aaPredicted RBP17.12■□□□□ 0.33
TUBB3-215ENST00000625617 CXCL17Q6UXB2 119 aa17.12■□□□□ 0.33
TUBB3-215ENST00000625617 TIFAQ96CG3 184 aa17.12■□□□□ 0.33
TUBB3-215ENST00000625617 ASTN1O14525 1302 aa17.12■□□□□ 0.33
TUBB3-215ENST00000625617 SALL3Q9BXA9 1300 aa17.12■□□□□ 0.33
TUBB3-215ENST00000625617 CABYRO75952 493 aa17.11■□□□□ 0.33
TUBB3-215ENST00000625617 FSCN1Q16658 493 aaKnown RBP17.11■□□□□ 0.33
TUBB3-215ENST00000625617 MUM1L1Q5H9M0 696 aa17.11■□□□□ 0.33
TUBB3-215ENST00000625617 TMEM240Q5SV17 173 aa17.11■□□□□ 0.33
TUBB3-215ENST00000625617 VPS53Q5VIR6 699 aa17.11■□□□□ 0.33
TUBB3-215ENST00000625617 NSMFQ6X4W1 530 aa17.11■□□□□ 0.33
TUBB3-215ENST00000625617 FBXO16Q8IX29 292 aaPredicted RBP17.11■□□□□ 0.33
TUBB3-215ENST00000625617 DCAF4Q8WV16 495 aa17.11■□□□□ 0.33
TUBB3-215ENST00000625617 EVI5LQ96CN4 794 aa17.11■□□□□ 0.33
TUBB3-215ENST00000625617 AP5M1Q9H0R1 490 aa17.11■□□□□ 0.33
TUBB3-215ENST00000625617 INCENPQ9NQS7 918 aa17.11■□□□□ 0.33
TUBB3-215ENST00000625617 TOMM22Q9NS69 142 aa17.11■□□□□ 0.33
TUBB3-215ENST00000625617 CYP39A1Q9NYL5 469 aa17.11■□□□□ 0.33
TUBB3-215ENST00000625617 ANAPC4Q9UJX5 808 aa17.11■□□□□ 0.33
TUBB3-215ENST00000625617 GNEQ9Y223 722 aaKnown RBP17.11■□□□□ 0.33
TUBB3-215ENST00000625617 ORC4O43929 436 aa17.1■□□□□ 0.33
TUBB3-215ENST00000625617 ZEB2O60315 1214 aa17.1■□□□□ 0.33
TUBB3-215ENST00000625617 ICAM1P05362 532 aa17.1■□□□□ 0.33
TUBB3-215ENST00000625617 GRIN2CQ14957 1233 aa17.1■□□□□ 0.33
TUBB3-215ENST00000625617 ZNF576Q9H609 170 aa17.1■□□□□ 0.33
TUBB3-215ENST00000625617 DDX49Q9Y6V7 483 aaKnown RBP17.1■□□□□ 0.33
TUBB3-215ENST00000625617 CD4P01730 458 aa17.09■□□□□ 0.33
TUBB3-215ENST00000625617 SMPD1P17405 629 aa17.09■□□□□ 0.33
TUBB3-215ENST00000625617 NOVP48745 357 aa17.09■□□□□ 0.33
TUBB3-215ENST00000625617 ANKRD45Q5TZF3 282 aa17.09■□□□□ 0.33
TUBB3-215ENST00000625617 C16orf59Q7L2K0 433 aa17.09■□□□□ 0.33
TUBB3-215ENST00000625617 EEPD1Q7L9B9 569 aa17.09■□□□□ 0.33
TUBB3-215ENST00000625617 SLC43A3Q8NBI5 491 aa17.09■□□□□ 0.33
TUBB3-215ENST00000625617 RANBP17Q9H2T7 1088 aaKnown RBP17.09■□□□□ 0.33
TUBB3-215ENST00000625617 HIPK3Q9H422 1215 aa17.09■□□□□ 0.33
TUBB3-215ENST00000625617 VTA1Q9NP79 307 aa17.09■□□□□ 0.33
TUBB3-215ENST00000625617 LRRC37A2A6NM11 1700 aa17.09■□□□□ 0.33
TUBB3-215ENST00000625617 DYNC1LI2O43237 492 aaPredicted RBP17.08■□□□□ 0.32
TUBB3-215ENST00000625617 ACRP10323 421 aa17.08■□□□□ 0.32
TUBB3-215ENST00000625617 PTGS1P23219 599 aa17.08■□□□□ 0.32
TUBB3-215ENST00000625617 CYP2C18P33260 490 aa17.08■□□□□ 0.32
TUBB3-215ENST00000625617 RRP1P56182 461 aaKnown RBP17.08■□□□□ 0.32
TUBB3-215ENST00000625617 ITGA7Q13683 1181 aa17.08■□□□□ 0.32
TUBB3-215ENST00000625617 ALX1Q15699 326 aa17.08■□□□□ 0.32
TUBB3-215ENST00000625617 RRP12Q5JTH9 1297 aaKnown RBP17.08■□□□□ 0.32
TUBB3-215ENST00000625617 RASIP1Q5U651 963 aa17.08■□□□□ 0.32
TUBB3-215ENST00000625617 SYDE2Q5VT97 1194 aa17.08■□□□□ 0.32
TUBB3-215ENST00000625617 IQSEC1Q6DN90 963 aa17.08■□□□□ 0.32
TUBB3-215ENST00000625617 ZNF365Q70YC5 407 aa17.08■□□□□ 0.32
TUBB3-215ENST00000625617 PBX4Q9BYU1 374 aa17.08■□□□□ 0.32
TUBB3-215ENST00000625617 MTIF3Q9H2K0 278 aaKnown RBP17.08■□□□□ 0.32
TUBB3-215ENST00000625617 IL23AQ9NPF7 189 aa17.08■□□□□ 0.32
TUBB3-215ENST00000625617 PDGFCQ9NRA1 345 aa17.08■□□□□ 0.32
TUBB3-215ENST00000625617 HELLSQ9NRZ9 838 aa17.08■□□□□ 0.32
TUBB3-215ENST00000625617 ADD3Q9UEY8 706 aaKnown RBP17.08■□□□□ 0.32
TUBB3-215ENST00000625617 CDH23Q9H251 3354 aa17.08■□□□□ 0.32
TUBB3-215ENST00000625617 TOP1P11387 765 aaKnown RBP17.07■□□□□ 0.32
TUBB3-215ENST00000625617 SLC16A2P36021 539 aa17.07■□□□□ 0.32
TUBB3-215ENST00000625617 PDE1AP54750 535 aa17.07■□□□□ 0.32
TUBB3-215ENST00000625617 TTBK2Q6IQ55 1244 aa17.07■□□□□ 0.32
TUBB3-215ENST00000625617 TAPT1Q6NXT6 567 aa17.07■□□□□ 0.32
TUBB3-215ENST00000625617 MORC4Q8TE76 937 aa17.07■□□□□ 0.32
TUBB3-215ENST00000625617 SEZ6LQ9BYH1 1024 aa17.07■□□□□ 0.32
TUBB3-215ENST00000625617 Q9Y3F1 56 aa17.07■□□□□ 0.32
TUBB3-215ENST00000625617 MCM3APO60318 1980 aa17.07■□□□□ 0.32
TUBB3-215ENST00000625617 ZMYM6O95789 1325 aa17.06■□□□□ 0.32
TUBB3-215ENST00000625617 FRMPD2Q68DX3 1309 aaPredicted RBP17.06■□□□□ 0.32
TUBB3-215ENST00000625617 A0A0D9SFI3 127 aa17.06■□□□□ 0.32
TUBB3-215ENST00000625617 GRXCR1A8MXD5 290 aa17.06■□□□□ 0.32
TUBB3-215ENST00000625617 NFIBO00712 420 aa17.06■□□□□ 0.32
TUBB3-215ENST00000625617 FGRP09769 529 aa17.06■□□□□ 0.32
TUBB3-215ENST00000625617 PBX2P40425 430 aa17.06■□□□□ 0.32
TUBB3-215ENST00000625617 BAATQ14032 418 aaPredicted RBP17.06■□□□□ 0.32
TUBB3-215ENST00000625617 RAB30Q15771 203 aa17.06■□□□□ 0.32
TUBB3-215ENST00000625617 BTNL9Q6UXG8 535 aa17.06■□□□□ 0.32
TUBB3-215ENST00000625617 KIAA1211Q6ZU35 1233 aa17.06■□□□□ 0.32
TUBB3-215ENST00000625617 HERVK_113Q902F9 699 aa17.06■□□□□ 0.32
TUBB3-215ENST00000625617 FAM227BQ96M60 508 aa17.06■□□□□ 0.32
TUBB3-215ENST00000625617 PURBQ96QR8 312 aaKnown RBP17.06■□□□□ 0.32
TUBB3-215ENST00000625617 EYSQ5T1H1 3165 aa17.05■□□□□ 0.32
TUBB3-215ENST00000625617 GRIN2DO15399 1336 aa17.05■□□□□ 0.32
TUBB3-215ENST00000625617 UMODL1Q5DID0 1318 aa17.05■□□□□ 0.32
TUBB3-215ENST00000625617 LOC102724159A0A0B4J2E5 919 aa17.05■□□□□ 0.32
TUBB3-215ENST00000625617 PTPDC1A2A3K4 754 aa17.05■□□□□ 0.32
TUBB3-215ENST00000625617 B4GALT4O60513 344 aa17.05■□□□□ 0.32
TUBB3-215ENST00000625617 FGAP02671 866 aa17.05■□□□□ 0.32
TUBB3-215ENST00000625617 ALDH5A1P51649 535 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-215ENST00000625617 PSMC6P62333 389 aa17.05■□□□□ 0.32
TUBB3-215ENST00000625617 PWP2Q15269 919 aaKnown RBP17.05■□□□□ 0.32
TUBB3-215ENST00000625617 MCMDC2Q4G0Z9 681 aa17.05■□□□□ 0.32
TUBB3-215ENST00000625617 USP38Q8NB14 1042 aa17.05■□□□□ 0.32
TUBB3-215ENST00000625617 GAS2L1Q99501 681 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-215ENST00000625617 TMEM47Q9BQJ4 181 aa17.05■□□□□ 0.32
TUBB3-215ENST00000625617 NOC4LQ9BVI4 516 aaKnown RBP17.05■□□□□ 0.32
TUBB3-215ENST00000625617 GPCPD1Q9NPB8 672 aa17.05■□□□□ 0.32
TUBB3-215ENST00000625617 PDHBP11177 359 aa17.04■□□□□ 0.32
TUBB3-215ENST00000625617 DUSP28Q4G0W2 176 aa17.04■□□□□ 0.32
TUBB3-215ENST00000625617 TMEM63BQ5T3F8 832 aa17.04■□□□□ 0.32
TUBB3-215ENST00000625617 SLC30A10Q6XR72 485 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms