RNA–Protein interactions for RNA: ENST00000624193.1

ATRX-215, Transcript of ATRX, chromatin remodeler, human

TSL 4

Gene ATRX, Length 463 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRX-215	ENST00000624193	PDE4B	Q07343	736 aa		18.21	■□□□□ 0.51
ATRX-215	ENST00000624193	RAB30	Q15771	203 aa		18.21	■□□□□ 0.51
ATRX-215	ENST00000624193	FSCN1	Q16658	493 aa	Known RBP	18.21	■□□□□ 0.51
ATRX-215	ENST00000624193	AKNAD1	Q5T1N1	836 aa		18.21	■□□□□ 0.51
ATRX-215	ENST00000624193	FAM160B2	Q86V87	743 aa		18.21	■□□□□ 0.51
ATRX-215	ENST00000624193	SLC43A3	Q8NBI5	491 aa		18.21	■□□□□ 0.51
ATRX-215	ENST00000624193	GMCL1	Q96IK5	515 aa		18.21	■□□□□ 0.51
ATRX-215	ENST00000624193	NACAP1	Q9BZK3	213 aa		18.21	■□□□□ 0.51
ATRX-215	ENST00000624193	MTIF3	Q9H2K0	278 aa	Known RBP	18.21	■□□□□ 0.51
ATRX-215	ENST00000624193	GNE	Q9Y223	722 aa	Known RBP	18.21	■□□□□ 0.51
ATRX-215	ENST00000624193	DDX49	Q9Y6V7	483 aa	Known RBP	18.21	■□□□□ 0.51
ATRX-215	ENST00000624193	LCT	P09848	1927 aa		18.2	■□□□□ 0.5
ATRX-215	ENST00000624193	CABYR	O75952	493 aa		18.2	■□□□□ 0.5
ATRX-215	ENST00000624193	FGB	P02675	491 aa		18.2	■□□□□ 0.5
ATRX-215	ENST00000624193	ALAS1	P13196	640 aa		18.2	■□□□□ 0.5
ATRX-215	ENST00000624193	ITGA7	Q13683	1181 aa		18.2	■□□□□ 0.5
ATRX-215	ENST00000624193	ADGRE1	Q14246	886 aa		18.2	■□□□□ 0.5
ATRX-215	ENST00000624193	CHURC1	Q8WUH1	139 aa		18.2	■□□□□ 0.5
ATRX-215	ENST00000624193	STAG1	Q8WVM7	1258 aa		18.2	■□□□□ 0.5
ATRX-215	ENST00000624193	TRERF1	Q96PN7	1200 aa		18.2	■□□□□ 0.5
ATRX-215	ENST00000624193	SEC62	Q99442	399 aa	Known RBP	18.2	■□□□□ 0.5
ATRX-215	ENST00000624193	AP5M1	Q9H0R1	490 aa		18.2	■□□□□ 0.5
ATRX-215	ENST00000624193	NKX2-4	Q9H2Z4	354 aa		18.2	■□□□□ 0.5
ATRX-215	ENST00000624193	THEG	Q9P2T0	379 aa		18.2	■□□□□ 0.5
ATRX-215	ENST00000624193	SLC3A2	P08195	630 aa	Known RBP	18.19	■□□□□ 0.5
ATRX-215	ENST00000624193	SMPD1	P17405	629 aa		18.19	■□□□□ 0.5
ATRX-215	ENST00000624193	IGFBP4	P22692	258 aa		18.19	■□□□□ 0.5
ATRX-215	ENST00000624193	MCC	P23508	829 aa		18.19	■□□□□ 0.5
ATRX-215	ENST00000624193	SNAP25	P60880	206 aa		18.19	■□□□□ 0.5
ATRX-215	ENST00000624193	PPARA	Q07869	468 aa		18.19	■□□□□ 0.5
ATRX-215	ENST00000624193	TKFC	Q3LXA3	575 aa		18.19	■□□□□ 0.5
ATRX-215	ENST00000624193	EEPD1	Q7L9B9	569 aa		18.19	■□□□□ 0.5
ATRX-215	ENST00000624193	OTOP2	Q7RTS6	562 aa		18.19	■□□□□ 0.5
ATRX-215	ENST00000624193	FBXO16	Q8IX29	292 aa	Predicted RBP	18.19	■□□□□ 0.5
ATRX-215	ENST00000624193	ATXN2L	Q8WWM7	1075 aa	Known RBP	18.19	■□□□□ 0.5
ATRX-215	ENST00000624193	TTC28	Q96AY4	2481 aa		18.19	■□□□□ 0.5
ATRX-215	ENST00000624193	NAPB	Q9H115	298 aa		18.19	■□□□□ 0.5
ATRX-215	ENST00000624193	PDGFC	Q9NRA1	345 aa		18.19	■□□□□ 0.5
ATRX-215	ENST00000624193	YBX2	Q9Y2T7	364 aa	Known RBP	18.19	■□□□□ 0.5
ATRX-215	ENST00000624193	SUPT16H	Q9Y5B9	1047 aa	Known RBP	18.19	■□□□□ 0.5
ATRX-215	ENST00000624193	PCDHB15	Q9Y5E8	787 aa		18.19	■□□□□ 0.5
ATRX-215	ENST00000624193	GRIN2D	O15399	1336 aa		18.19	■□□□□ 0.5
ATRX-215	ENST00000624193	DYNC1LI2	O43237	492 aa	Predicted RBP	18.18	■□□□□ 0.5
ATRX-215	ENST00000624193	ZEB2	O60315	1214 aa		18.18	■□□□□ 0.5
ATRX-215	ENST00000624193	B4GALT4	O60513	344 aa		18.18	■□□□□ 0.5
ATRX-215	ENST00000624193	CCL23	P55773	120 aa		18.18	■□□□□ 0.5
ATRX-215	ENST00000624193	PSMC6	P62333	389 aa		18.18	■□□□□ 0.5
ATRX-215	ENST00000624193	CCDC85B	Q15834	202 aa	Predicted RBP	18.18	■□□□□ 0.5
ATRX-215	ENST00000624193	LRRFIP1	Q32MZ4	808 aa	Known RBP	18.18	■□□□□ 0.5
ATRX-215	ENST00000624193	MUM1L1	Q5H9M0	696 aa		18.18	■□□□□ 0.5
ATRX-215	ENST00000624193	KCTD1	Q719H9	257 aa		18.18	■□□□□ 0.5
ATRX-215	ENST00000624193	NOC4L	Q9BVI4	516 aa	Known RBP	18.18	■□□□□ 0.5
ATRX-215	ENST00000624193	TRPV6	Q9H1D0	765 aa		18.18	■□□□□ 0.5
ATRX-215	ENST00000624193	DCTPP1	Q9H773	170 aa		18.18	■□□□□ 0.5
ATRX-215	ENST00000624193	SLC28A3	Q9HAS3	691 aa		18.18	■□□□□ 0.5
ATRX-215	ENST00000624193	STX8	Q9UNK0	236 aa		18.18	■□□□□ 0.5
ATRX-215	ENST00000624193	MYO9B	Q13459	2157 aa		18.18	■□□□□ 0.5
ATRX-215	ENST00000624193	TMEM63B	Q5T3F8	832 aa		18.17	■□□□□ 0.5
ATRX-215	ENST00000624193	TAPT1	Q6NXT6	567 aa		18.17	■□□□□ 0.5
ATRX-215	ENST00000624193	RASGRP2	Q7LDG7	609 aa		18.17	■□□□□ 0.5
ATRX-215	ENST00000624193	ASB2	Q96Q27	587 aa		18.17	■□□□□ 0.5
ATRX-215	ENST00000624193	WNT8A	Q9H1J5	351 aa		18.17	■□□□□ 0.5
ATRX-215	ENST00000624193	CYP39A1	Q9NYL5	469 aa		18.17	■□□□□ 0.5
ATRX-215	ENST00000624193	PRR12	Q9ULL5	1215 aa		18.17	■□□□□ 0.5
ATRX-215	ENST00000624193	PLA2G6	O60733	806 aa		18.16	■□□□□ 0.5
ATRX-215	ENST00000624193	IQSEC1	Q6DN90	963 aa		18.16	■□□□□ 0.5
ATRX-215	ENST00000624193	RCSD1	Q6JBY9	416 aa		18.16	■□□□□ 0.5
ATRX-215	ENST00000624193	NSMF	Q6X4W1	530 aa		18.16	■□□□□ 0.5
ATRX-215	ENST00000624193	ADAMTS19	Q8TE59	1207 aa		18.16	■□□□□ 0.5
ATRX-215	ENST00000624193	FSD1	Q9BTV5	496 aa		18.16	■□□□□ 0.5
ATRX-215	ENST00000624193	SEZ6L	Q9BYH1	1024 aa		18.16	■□□□□ 0.5
ATRX-215	ENST00000624193	TSPY2	A6NKD2	308 aa		18.15	■□□□□ 0.5
ATRX-215	ENST00000624193	NMT2	O60551	498 aa		18.15	■□□□□ 0.5
ATRX-215	ENST00000624193	RABGGTB	P53611	331 aa		18.15	■□□□□ 0.5
ATRX-215	ENST00000624193	MRPS5	P82675	430 aa	Known RBP	18.15	■□□□□ 0.5
ATRX-215	ENST00000624193	PPP4R3B	Q5MIZ7	849 aa		18.15	■□□□□ 0.5
ATRX-215	ENST00000624193	ZMYM1	Q5SVZ6	1142 aa		18.15	■□□□□ 0.5
ATRX-215	ENST00000624193	PURB	Q96QR8	312 aa	Known RBP	18.15	■□□□□ 0.5
ATRX-215	ENST00000624193	VTA1	Q9NP79	307 aa		18.15	■□□□□ 0.5
ATRX-215	ENST00000624193	IL17RB	Q9NRM6	502 aa		18.15	■□□□□ 0.5
ATRX-215	ENST00000624193	CCPG1	Q9ULG6	757 aa		18.15	■□□□□ 0.5
ATRX-215	ENST00000624193	MTMR7	Q9Y216	660 aa		18.15	■□□□□ 0.5
ATRX-215	ENST00000624193	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	18.15	■□□□□ 0.5
ATRX-215	ENST00000624193		Q9Y3F1	56 aa		18.15	■□□□□ 0.5
ATRX-215	ENST00000624193	TTC41P	Q6P2S7	1318 aa		18.15	■□□□□ 0.5
ATRX-215	ENST00000624193	COL9A1	P20849	921 aa		18.14	■□□□□ 0.49
ATRX-215	ENST00000624193	CTDSPL2	Q05D32	466 aa		18.14	■□□□□ 0.49
ATRX-215	ENST00000624193	PPP2R2D	Q66LE6	453 aa		18.14	■□□□□ 0.49
ATRX-215	ENST00000624193	KIAA1211	Q6ZU35	1233 aa		18.14	■□□□□ 0.49
ATRX-215	ENST00000624193	PI4K2B	Q8TCG2	481 aa		18.14	■□□□□ 0.49
ATRX-215	ENST00000624193	SCLY	Q96I15	445 aa		18.14	■□□□□ 0.49
ATRX-215	ENST00000624193	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	18.14	■□□□□ 0.49
ATRX-215	ENST00000624193	INCENP	Q9NQS7	918 aa		18.14	■□□□□ 0.49
ATRX-215	ENST00000624193	SLC4A7	Q9Y6M7	1214 aa		18.14	■□□□□ 0.49
ATRX-215	ENST00000624193	ZBBX	A8MT70	800 aa		18.13	■□□□□ 0.49
ATRX-215	ENST00000624193	ERC2	O15083	957 aa		18.13	■□□□□ 0.49
ATRX-215	ENST00000624193	ICAM1	P05362	532 aa		18.13	■□□□□ 0.49
ATRX-215	ENST00000624193	MYOG	P15173	224 aa		18.13	■□□□□ 0.49
ATRX-215	ENST00000624193	CCDC96	Q2M329	555 aa		18.13	■□□□□ 0.49
ATRX-215	ENST00000624193	RPUSD2	Q8IZ73	545 aa	Known RBP	18.13	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms