RNA–Protein interactions for RNA: ENST00000623236.1

CR392039.3-201, humanhuman

TSL 5 BASIC

Gene CR392039.3, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR392039.3-201ENST00000623236 CSRNP2Q9H175 543 aa8.75□□□□□ -1.01
CR392039.3-201ENST00000623236 GLT8D2Q9H1C3 349 aa8.75□□□□□ -1.01
CR392039.3-201ENST00000623236 RANBP17Q9H2T7 1088 aaKnown RBP8.75□□□□□ -1.01
CR392039.3-201ENST00000623236 TAF1DQ9H5J8 278 aaPredicted RBP8.75□□□□□ -1.01
CR392039.3-201ENST00000623236 GRPEL1Q9HAV7 217 aa8.75□□□□□ -1.01
CR392039.3-201ENST00000623236 AS3MTQ9HBK9 375 aa8.75□□□□□ -1.01
CR392039.3-201ENST00000623236 FBXO28Q9NVF7 368 aa8.75□□□□□ -1.01
CR392039.3-201ENST00000623236 FAM13BQ9NYF5 915 aa8.75□□□□□ -1.01
CR392039.3-201ENST00000623236 KCNH3Q9ULD8 1083 aa8.75□□□□□ -1.01
CR392039.3-201ENST00000623236 ZHX2Q9Y6X8 837 aa8.75□□□□□ -1.01
CR392039.3-201ENST00000623236 USP17L15C9J2P7 530 aa8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 C19orf81C9J6K1 198 aa8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 USP17L13C9JLJ4 530 aa8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 USP17L11C9JVI0 530 aa8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 USP17L18D6R9N7 530 aa8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 USP17L22D6RA61 530 aa8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 USP17L17D6RBQ6 530 aa8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 USP17L19D6RCP7 530 aa8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 USP17L20D6RJB6 530 aa8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 XRCC6P12956 609 aaKnown RBP eCLIP8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 USP14P54578 494 aa8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 BACE1P56817 501 aa8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 USP17L24Q0WX57 530 aa8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 TRAF1Q13077 416 aa8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 MTMR2Q13614 643 aa8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 PRKG1Q13976 671 aa8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 LETM2Q2VYF4 491 aa8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 ARL6IP4Q66PJ3 421 aaKnown RBP8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 USP17L6PQ6QN14 398 aa8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 USP49Q70CQ1 688 aa8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 NEK8Q86SG6 692 aa8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 CKAP2LQ8IYA6 745 aa8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 TIGD1Q96MW7 591 aa8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 SDF4Q9BRK5 362 aa8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 TMEM60Q9H2L4 133 aa8.74□□□□□ -1.01
CR392039.3-201ENST00000623236 SSC5DA1L4H1 1573 aa8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 BAZ2BQ9UIF8 2168 aaKnown RBP8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 VWA3AA6NCI4 1184 aa8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 IQCA1LA6NCM1 817 aa8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 LAD1O00515 517 aa8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 MEIS2O14770 477 aa8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 OPLAHO14841 1288 aa8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 PPP1R12BO60237 982 aaPredicted RBP8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 TAL1P17542 331 aaPredicted RBP8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 VCAM1P19320 739 aa8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 DGKZQ13574 1117 aa8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 USH1GQ495M9 461 aa8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 LONRF3Q496Y0 759 aa8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 MCTP2Q6DN12 878 aa8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 CCDC174Q6PII3 467 aa8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 ELOA2Q8IYF1 753 aaPredicted RBP8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 PRPF38AQ8NAV1 312 aaKnown RBP8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 CDCA5Q96FF9 252 aa8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 EPSTI1Q96J88 318 aa8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 C12orf42Q96LP6 360 aa8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 SLF1Q9BQI6 1058 aa8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 PANK2Q9BZ23 570 aa8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 RPAP3Q9H6T3 665 aaPredicted RBP8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 AFG3L2Q9Y4W6 797 aa8.73□□□□□ -1.01
CR392039.3-201ENST00000623236 TCHHQ07283 1943 aa8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 CCNT1O60563 726 aaKnown RBP8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 FOSP01100 380 aaPredicted RBP8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 CCDC192P0DO97 292 aa8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 PRPHP41219 470 aa8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 TYRO3Q06418 890 aa8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 AP3B2Q13367 1082 aa8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 ORC2Q13416 577 aaPredicted RBP8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 VGLL4Q14135 290 aa8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 EAPPQ56P03 285 aaPredicted RBP8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 SASS6Q6UVJ0 657 aa8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 DTHD1Q6ZMT9 781 aa8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 KRBA2Q6ZNG9 492 aa8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 PNMA8AQ86V59 439 aaPredicted RBP8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 LDHDQ86WU2 507 aa8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 TEX2Q8IWB9 1127 aa8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 TBC1D5Q92609 795 aa8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 MTMR9Q96QG7 549 aa8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 P2RX7Q99572 595 aaKnown RBP8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 ANO3Q9BYT9 981 aa8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 TANGO6Q9C0B7 1094 aa8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 SERTAD1Q9UHV2 236 aa8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 PPP1R9AQ9ULJ8 1098 aa8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 MRPL11Q9Y3B7 192 aaKnown RBP8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 SNCAIPQ9Y6H5 919 aa8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 ZNF536O15090 1300 aa8.72□□□□□ -1.01
CR392039.3-201ENST00000623236 SBF1O95248 1867 aa8.71□□□□□ -1.01
CR392039.3-201ENST00000623236 A0A087X0B3 334 aa8.71□□□□□ -1.02
CR392039.3-201ENST00000623236 PIK3CDO00329 1044 aa8.71□□□□□ -1.02
CR392039.3-201ENST00000623236 POLR2DO15514 142 aaKnown RBP8.71□□□□□ -1.02
CR392039.3-201ENST00000623236 NEMFO60524 1076 aa8.71□□□□□ -1.02
CR392039.3-201ENST00000623236 FLOT1O75955 427 aa8.71□□□□□ -1.02
CR392039.3-201ENST00000623236 TDP2O95551 362 aa8.71□□□□□ -1.02
CR392039.3-201ENST00000623236 ICAM1P05362 532 aa8.71□□□□□ -1.02
CR392039.3-201ENST00000623236 OR52Z1P0C646 297 aa8.71□□□□□ -1.02
CR392039.3-201ENST00000623236 NF2P35240 595 aa8.71□□□□□ -1.02
CR392039.3-201ENST00000623236 LONP1P36776 959 aaKnown RBP8.71□□□□□ -1.02
CR392039.3-201ENST00000623236 IREB2P48200 963 aaKnown RBP8.71□□□□□ -1.02
CR392039.3-201ENST00000623236 USP11P51784 963 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms