RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 QRICH1Q2TAL8 776 aa16.25■□□□□ 0.19
PCDHGC3-208ENST00000622836 SYNE3Q6ZMZ3 975 aa16.25■□□□□ 0.19
PCDHGC3-208ENST00000622836 RNF207Q6ZRF8 634 aa16.25■□□□□ 0.19
PCDHGC3-208ENST00000622836 ZNF467Q7Z7K2 595 aaPredicted RBP16.25■□□□□ 0.19
PCDHGC3-208ENST00000622836 FBXO11Q86XK2 927 aa16.25■□□□□ 0.19
PCDHGC3-208ENST00000622836 HOMER1Q86YM7 354 aa16.25■□□□□ 0.19
PCDHGC3-208ENST00000622836 MSL3Q8N5Y2 521 aaKnown RBP16.25■□□□□ 0.19
PCDHGC3-208ENST00000622836 TRPV1Q8NER1 839 aa16.25■□□□□ 0.19
PCDHGC3-208ENST00000622836 TCEANC2Q96MN5 208 aa16.25■□□□□ 0.19
PCDHGC3-208ENST00000622836 JAKMIP1Q96N16 626 aaKnown RBP16.25■□□□□ 0.19
PCDHGC3-208ENST00000622836 ZHX1Q9UKY1 873 aaPredicted RBP16.25■□□□□ 0.19
PCDHGC3-208ENST00000622836 ABCB11O95342 1321 aa16.24■□□□□ 0.19
PCDHGC3-208ENST00000622836 SYNGAP1Q96PV0 1343 aa16.24■□□□□ 0.19
PCDHGC3-208ENST00000622836 SEPT4O43236 478 aa16.24■□□□□ 0.19
PCDHGC3-208ENST00000622836 IGHA2P01877 340 aa16.24■□□□□ 0.19
PCDHGC3-208ENST00000622836 MYCNP04198 464 aaPredicted RBP16.24■□□□□ 0.19
PCDHGC3-208ENST00000622836 CALM1P0DP23 149 aa16.24■□□□□ 0.19
PCDHGC3-208ENST00000622836 CALM2P0DP24 149 aa16.24■□□□□ 0.19
PCDHGC3-208ENST00000622836 CALM3P0DP25 149 aa16.24■□□□□ 0.19
PCDHGC3-208ENST00000622836 CALML3P27482 149 aa16.24■□□□□ 0.19
PCDHGC3-208ENST00000622836 LIFRP42702 1097 aa16.24■□□□□ 0.19
PCDHGC3-208ENST00000622836 BAATQ14032 418 aaPredicted RBP16.24■□□□□ 0.19
PCDHGC3-208ENST00000622836 COL9A3Q14050 684 aaPredicted RBP16.24■□□□□ 0.19
PCDHGC3-208ENST00000622836 ANO1Q5XXA6 986 aa16.24■□□□□ 0.19
PCDHGC3-208ENST00000622836 ANKLE1Q8NAG6 615 aa16.24■□□□□ 0.19
PCDHGC3-208ENST00000622836 NRBP1Q9UHY1 535 aa16.24■□□□□ 0.19
PCDHGC3-208ENST00000622836 OGDHLQ9ULD0 1010 aa16.24■□□□□ 0.19
PCDHGC3-208ENST00000622836 SNX14Q9Y5W7 946 aa16.24■□□□□ 0.19
PCDHGC3-208ENST00000622836 ZBTB5O15062 677 aa16.23■□□□□ 0.19
PCDHGC3-208ENST00000622836 RXRAP19793 462 aa16.23■□□□□ 0.19
PCDHGC3-208ENST00000622836 LHX8Q68G74 356 aa16.23■□□□□ 0.19
PCDHGC3-208ENST00000622836 BLOC1S2Q6QNY1 142 aa16.23■□□□□ 0.19
PCDHGC3-208ENST00000622836 ARMCX2Q7L311 632 aa16.23■□□□□ 0.19
PCDHGC3-208ENST00000622836 RAB11FIP4Q86YS3 637 aa16.23■□□□□ 0.19
PCDHGC3-208ENST00000622836 CCDC144CPQ8IYA2 1237 aa16.23■□□□□ 0.19
PCDHGC3-208ENST00000622836 FAM133AQ8N9E0 248 aa16.23■□□□□ 0.19
PCDHGC3-208ENST00000622836 CLEC4DQ8WXI8 215 aa16.23■□□□□ 0.19
PCDHGC3-208ENST00000622836 PIBF1Q8WXW3 757 aa16.23■□□□□ 0.19
PCDHGC3-208ENST00000622836 AMNQ9BXJ7 453 aa16.23■□□□□ 0.19
PCDHGC3-208ENST00000622836 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.23■□□□□ 0.19
PCDHGC3-208ENST00000622836 ADD3Q9UEY8 706 aaKnown RBP16.23■□□□□ 0.19
PCDHGC3-208ENST00000622836 NAP1L2Q9ULW6 460 aaPredicted RBP16.23■□□□□ 0.19
PCDHGC3-208ENST00000622836 PDE4DIPQ5VU43 2346 aa16.23■□□□□ 0.19
PCDHGC3-208ENST00000622836 SMCHD1A6NHR9 2005 aa16.23■□□□□ 0.19
PCDHGC3-208ENST00000622836 ASB14A6NK59 587 aa16.22■□□□□ 0.19
PCDHGC3-208ENST00000622836 EPB41L2O43491 1005 aaKnown RBP16.22■□□□□ 0.19
PCDHGC3-208ENST00000622836 SNAI1O95863 264 aaPredicted RBP16.22■□□□□ 0.19
PCDHGC3-208ENST00000622836 PSMA5P28066 241 aa16.22■□□□□ 0.19
PCDHGC3-208ENST00000622836 GNAQP50148 359 aa16.22■□□□□ 0.19
PCDHGC3-208ENST00000622836 EXOSC10Q01780 885 aaKnown RBP16.22■□□□□ 0.19
PCDHGC3-208ENST00000622836 TRAF1Q13077 416 aa16.22■□□□□ 0.19
PCDHGC3-208ENST00000622836 MAMDC4Q6UXC1 1216 aa16.22■□□□□ 0.19
PCDHGC3-208ENST00000622836 SLC30A10Q6XR72 485 aa16.22■□□□□ 0.19
PCDHGC3-208ENST00000622836 NECAB2Q7Z6G3 386 aa16.22■□□□□ 0.19
PCDHGC3-208ENST00000622836 MICU3Q86XE3 530 aa16.22■□□□□ 0.19
PCDHGC3-208ENST00000622836 MCF2L2Q86YR7 1114 aa16.22■□□□□ 0.19
PCDHGC3-208ENST00000622836 DIS3LQ8TF46 1054 aaKnown RBP16.22■□□□□ 0.19
PCDHGC3-208ENST00000622836 PAWRQ96IZ0 340 aaKnown RBP16.22■□□□□ 0.19
PCDHGC3-208ENST00000622836 FGD4Q96M96 766 aa16.22■□□□□ 0.19
PCDHGC3-208ENST00000622836 PIGSQ96S52 555 aa16.22■□□□□ 0.19
PCDHGC3-208ENST00000622836 MAP3K14Q99558 947 aa16.22■□□□□ 0.19
PCDHGC3-208ENST00000622836 HTATIP2Q9BUP3 242 aa16.22■□□□□ 0.19
PCDHGC3-208ENST00000622836 MRPL11Q9Y3B7 192 aaKnown RBP16.22■□□□□ 0.19
PCDHGC3-208ENST00000622836 MYH6P13533 1939 aa16.21■□□□□ 0.19
PCDHGC3-208ENST00000622836 MKI67P46013 3256 aaKnown RBP16.21■□□□□ 0.19
PCDHGC3-208ENST00000622836 SOWAHBA6NEL2 793 aa16.21■□□□□ 0.19
PCDHGC3-208ENST00000622836 RARBP10826 455 aa16.21■□□□□ 0.19
PCDHGC3-208ENST00000622836 AKR1A1P14550 325 aa16.21■□□□□ 0.19
PCDHGC3-208ENST00000622836 CPA1P15085 419 aa16.21■□□□□ 0.19
PCDHGC3-208ENST00000622836 CASTP20810 708 aaKnown RBP16.21■□□□□ 0.19
PCDHGC3-208ENST00000622836 RPS6P62753 249 aaKnown RBP16.21■□□□□ 0.19
PCDHGC3-208ENST00000622836 ACVR2BQ13705 512 aa16.21■□□□□ 0.19
PCDHGC3-208ENST00000622836 SGMS1Q86VZ5 419 aa16.21■□□□□ 0.19
PCDHGC3-208ENST00000622836 DPF3Q92784 378 aa16.21■□□□□ 0.19
PCDHGC3-208ENST00000622836 KCNB2Q92953 911 aa16.21■□□□□ 0.19
PCDHGC3-208ENST00000622836 RRP36Q96EU6 259 aaKnown RBP16.21■□□□□ 0.19
PCDHGC3-208ENST00000622836 PURBQ96QR8 312 aaKnown RBP16.21■□□□□ 0.19
PCDHGC3-208ENST00000622836 MPHOSPH6Q99547 160 aaKnown RBP16.21■□□□□ 0.19
PCDHGC3-208ENST00000622836 LZTS2Q9BRK4 669 aa16.21■□□□□ 0.19
PCDHGC3-208ENST00000622836 ABHD16BQ9H3Z7 469 aa16.21■□□□□ 0.19
PCDHGC3-208ENST00000622836 RIOX1Q9H6W3 641 aa16.21■□□□□ 0.19
PCDHGC3-208ENST00000622836 SEC63Q9UGP8 760 aaKnown RBP16.21■□□□□ 0.19
PCDHGC3-208ENST00000622836 FAM184BQ9ULE4 1060 aa16.21■□□□□ 0.19
PCDHGC3-208ENST00000622836 PCDHA1Q9Y5I3 950 aa16.21■□□□□ 0.19
PCDHGC3-208ENST00000622836 TNRC18O15417 2968 aaPredicted RBP16.2■□□□□ 0.18
PCDHGC3-208ENST00000622836 ZNF865P0CJ78 1059 aaPredicted RBP16.2■□□□□ 0.18
PCDHGC3-208ENST00000622836 FANCBQ8NB91 859 aa16.2■□□□□ 0.18
PCDHGC3-208ENST00000622836 USP26Q9BXU7 913 aa16.2■□□□□ 0.18
PCDHGC3-208ENST00000622836 C11orf49Q9H6J7 331 aa16.2■□□□□ 0.18
PCDHGC3-208ENST00000622836 BAZ2BQ9UIF8 2168 aaKnown RBP16.2■□□□□ 0.18
PCDHGC3-208ENST00000622836 PNMA6FA0A0J9YX94 578 aa16.19■□□□□ 0.18
PCDHGC3-208ENST00000622836 KLF18A0A0U1RQI7 1052 aa16.19■□□□□ 0.18
PCDHGC3-208ENST00000622836 B4DLN1 442 aa16.19■□□□□ 0.18
PCDHGC3-208ENST00000622836 ZBTB43O43298 467 aa16.19■□□□□ 0.18
PCDHGC3-208ENST00000622836 CYTH3O43739 400 aa16.19■□□□□ 0.18
PCDHGC3-208ENST00000622836 EIF5BO60841 1220 aaKnown RBP16.19■□□□□ 0.18
PCDHGC3-208ENST00000622836 PLEKHA8P1O95397 391 aa16.19■□□□□ 0.18
PCDHGC3-208ENST00000622836 CFBP00751 764 aa16.19■□□□□ 0.18
PCDHGC3-208ENST00000622836 ALDH5A1P51649 535 aaPredicted RBP16.19■□□□□ 0.18
PCDHGC3-208ENST00000622836 MRPL12P52815 198 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms