RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 ADALQ6DHV7 355 aa8□□□□□ -1.13
CBWD3-219ENST00000622817 KRT25Q7Z3Z0 450 aa8□□□□□ -1.13
CBWD3-219ENST00000622817 CCDC84Q86UT8 332 aaPredicted RBP8□□□□□ -1.13
CBWD3-219ENST00000622817 ZKSCAN4Q969J2 545 aaPredicted RBP8□□□□□ -1.13
CBWD3-219ENST00000622817 COA7Q96BR5 231 aa8□□□□□ -1.13
CBWD3-219ENST00000622817 AMNQ9BXJ7 453 aa8□□□□□ -1.13
CBWD3-219ENST00000622817 GLIS2Q9BZE0 524 aaPredicted RBP8□□□□□ -1.13
CBWD3-219ENST00000622817 EIF4ENIF1Q9NRA8 985 aaKnown RBP8□□□□□ -1.13
CBWD3-219ENST00000622817 PRR12Q9ULL5 1215 aa8□□□□□ -1.13
CBWD3-219ENST00000622817 PCDHA7Q9UN72 937 aa8□□□□□ -1.13
CBWD3-219ENST00000622817 PCDHA6Q9UN73 950 aa8□□□□□ -1.13
CBWD3-219ENST00000622817 PCDHA8Q9Y5H6 950 aa8□□□□□ -1.13
CBWD3-219ENST00000622817 MORC2Q9Y6X9 1032 aaPredicted RBP8□□□□□ -1.13
CBWD3-219ENST00000622817 SCN4AP35499 1836 aa8□□□□□ -1.13
CBWD3-219ENST00000622817 ATAD5Q96QE3 1844 aa8□□□□□ -1.13
CBWD3-219ENST00000622817 POLR2AP24928 1970 aaKnown RBP8□□□□□ -1.13
CBWD3-219ENST00000622817 FAM205CA6NFA0 338 aa8□□□□□ -1.13
CBWD3-219ENST00000622817 WDR46O15213 610 aaKnown RBP8□□□□□ -1.13
CBWD3-219ENST00000622817 PPP1R11O60927 126 aaPredicted RBP8□□□□□ -1.13
CBWD3-219ENST00000622817 USP2O75604 605 aaPredicted RBP8□□□□□ -1.13
CBWD3-219ENST00000622817 ATP2B1P20020 1258 aa8□□□□□ -1.13
CBWD3-219ENST00000622817 IREB2P48200 963 aaKnown RBP8□□□□□ -1.13
CBWD3-219ENST00000622817 MRPL12P52815 198 aaKnown RBP8□□□□□ -1.13
CBWD3-219ENST00000622817 MAP3K9P80192 1104 aa8□□□□□ -1.13
CBWD3-219ENST00000622817 EAPPQ56P03 285 aaPredicted RBP8□□□□□ -1.13
CBWD3-219ENST00000622817 EARS2Q5JPH6 523 aaKnown RBP8□□□□□ -1.13
CBWD3-219ENST00000622817 CCDC73Q6ZRK6 1079 aa8□□□□□ -1.13
CBWD3-219ENST00000622817 PIK3AP1Q6ZUJ8 805 aa8□□□□□ -1.13
CBWD3-219ENST00000622817 FBXO11Q86XK2 927 aa8□□□□□ -1.13
CBWD3-219ENST00000622817 REXO1Q8N1G1 1221 aaKnown RBP8□□□□□ -1.13
CBWD3-219ENST00000622817 ZNF280CQ8ND82 737 aa8□□□□□ -1.13
CBWD3-219ENST00000622817 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8□□□□□ -1.13
CBWD3-219ENST00000622817 RIC8AQ9NPQ8 531 aa8□□□□□ -1.13
CBWD3-219ENST00000622817 PCDHA1Q9Y5I3 950 aa8□□□□□ -1.13
CBWD3-219ENST00000622817 DOCK1Q14185 1865 aa7.99□□□□□ -1.13
CBWD3-219ENST00000622817 C19orf81C9J6K1 198 aa7.99□□□□□ -1.13
CBWD3-219ENST00000622817 CUTAO60888 179 aa7.99□□□□□ -1.13
CBWD3-219ENST00000622817 MARCKSP29966 332 aaPredicted RBP7.99□□□□□ -1.13
CBWD3-219ENST00000622817 BACE1P56817 501 aa7.99□□□□□ -1.13
CBWD3-219ENST00000622817 SPP2Q13103 211 aa7.99□□□□□ -1.13
CBWD3-219ENST00000622817 NOM1Q5C9Z4 860 aaKnown RBP7.99□□□□□ -1.13
CBWD3-219ENST00000622817 TTC38Q5R3I4 469 aa7.99□□□□□ -1.13
CBWD3-219ENST00000622817 CCDC183Q5T5S1 534 aa7.99□□□□□ -1.13
CBWD3-219ENST00000622817 TEX2Q8IWB9 1127 aa7.99□□□□□ -1.13
CBWD3-219ENST00000622817 CCAR1Q8IX12 1150 aaKnown RBP7.99□□□□□ -1.13
CBWD3-219ENST00000622817 KRI1Q8N9T8 703 aaKnown RBP7.99□□□□□ -1.13
CBWD3-219ENST00000622817 CUL5Q93034 780 aa7.99□□□□□ -1.13
CBWD3-219ENST00000622817 CDCA5Q96FF9 252 aa7.99□□□□□ -1.13
CBWD3-219ENST00000622817 PSTPIP2Q9H939 334 aa7.99□□□□□ -1.13
CBWD3-219ENST00000622817 TMEM63CQ9P1W3 806 aa7.99□□□□□ -1.13
CBWD3-219ENST00000622817 PCDHB6Q9Y5E3 794 aa7.99□□□□□ -1.13
CBWD3-219ENST00000622817 ZHX2Q9Y6X8 837 aa7.99□□□□□ -1.13
CBWD3-219ENST00000622817 WDR90Q96KV7 1748 aa7.99□□□□□ -1.13
CBWD3-219ENST00000622817 POTECB2RU33 542 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 ADAMTS3O15072 1205 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 LETM1O95202 739 aaPredicted RBP7.98□□□□□ -1.13
CBWD3-219ENST00000622817 LIG1P18858 919 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 CMA1P23946 247 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 MTMR2Q13614 643 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 PRKG1Q13976 671 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 NONOQ15233 471 aaKnown RBP eCLIP7.98□□□□□ -1.13
CBWD3-219ENST00000622817 ZSCAN23Q3MJ62 389 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 AXDND1Q5T1B0 1012 aaPredicted RBP7.98□□□□□ -1.13
CBWD3-219ENST00000622817 MCTP2Q6DN12 878 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 FSIP1Q8NA03 581 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 RASGRP4Q8TDF6 673 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 MRPS27Q92552 414 aaKnown RBP7.98□□□□□ -1.13
CBWD3-219ENST00000622817 KIFC2Q96AC6 838 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 RANBP17Q9H2T7 1088 aaKnown RBP7.98□□□□□ -1.13
CBWD3-219ENST00000622817 EMILIN3Q9NT22 766 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 DDX19AQ9NUU7 478 aaKnown RBP7.98□□□□□ -1.13
CBWD3-219ENST00000622817 PCDH10Q9P2E7 1040 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 CSADQ9Y600 493 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 VCAM1P19320 739 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 PTPREP23469 700 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 ZNF445P59923 1031 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 SNAP25P60880 206 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 FAM160A1Q05DH4 1040 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 ZNF174Q15697 407 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 INF2Q27J81 1249 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 JAKMIP3Q5VZ66 844 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 DLK2Q6UY11 383 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.98□□□□□ -1.13
CBWD3-219ENST00000622817 PRPF38AQ8NAV1 312 aaKnown RBP7.98□□□□□ -1.13
CBWD3-219ENST00000622817 RBM46Q8TBY0 533 aaKnown RBP7.98□□□□□ -1.13
CBWD3-219ENST00000622817 FERMT2Q96AC1 680 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 C12orf42Q96LP6 360 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 SLF1Q9BQI6 1058 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 BIN2Q9UBW5 565 aaPredicted RBP7.98□□□□□ -1.13
CBWD3-219ENST00000622817 FZD1Q9UP38 647 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 SNCAIPQ9Y6H5 919 aa7.98□□□□□ -1.13
CBWD3-219ENST00000622817 FDX1P10109 184 aa7.97□□□□□ -1.13
CBWD3-219ENST00000622817 MCM7P33993 719 aa7.97□□□□□ -1.13
CBWD3-219ENST00000622817 ATP2C1P98194 919 aaPredicted RBP7.97□□□□□ -1.13
CBWD3-219ENST00000622817 ORC2Q13416 577 aaPredicted RBP7.97□□□□□ -1.13
CBWD3-219ENST00000622817 VGLL4Q14135 290 aa7.97□□□□□ -1.13
CBWD3-219ENST00000622817 MAP3K11Q16584 847 aa7.97□□□□□ -1.13
CBWD3-219ENST00000622817 TMEM92Q6UXU6 159 aa7.97□□□□□ -1.13
CBWD3-219ENST00000622817 NEK8Q86SG6 692 aa7.97□□□□□ -1.13
CBWD3-219ENST00000622817 TANGO6Q9C0B7 1094 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms