RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 WASF1Q92558 559 aa22.91■■□□□ 1.26
PDLIM2-221ENST00000622702 ZNF214Q9UL59 606 aaPredicted RBP22.91■■□□□ 1.26
PDLIM2-221ENST00000622702 PTPN22Q9Y2R2 807 aa22.91■■□□□ 1.26
PDLIM2-221ENST00000622702 CTDP1Q9Y5B0 961 aaPredicted RBP22.91■■□□□ 1.26
PDLIM2-221ENST00000622702 MYH6P13533 1939 aa22.9■■□□□ 1.26
PDLIM2-221ENST00000622702 hCG_1984214I3L0E3 225 aa22.9■■□□□ 1.26
PDLIM2-221ENST00000622702 PPP1R11O60927 126 aaPredicted RBP22.9■■□□□ 1.26
PDLIM2-221ENST00000622702 HOXD10P28358 340 aa22.9■■□□□ 1.26
PDLIM2-221ENST00000622702 TRAF1Q13077 416 aa22.9■■□□□ 1.26
PDLIM2-221ENST00000622702 TMEM132BQ14DG7 1078 aa22.9■■□□□ 1.26
PDLIM2-221ENST00000622702 CCDC174Q6PII3 467 aa22.9■■□□□ 1.26
PDLIM2-221ENST00000622702 FBXO11Q86XK2 927 aa22.9■■□□□ 1.26
PDLIM2-221ENST00000622702 CCAR1Q8IX12 1150 aaKnown RBP22.9■■□□□ 1.26
PDLIM2-221ENST00000622702 ZNF713Q8N859 430 aaPredicted RBP22.9■■□□□ 1.26
PDLIM2-221ENST00000622702 AMNQ9BXJ7 453 aa22.9■■□□□ 1.26
PDLIM2-221ENST00000622702 COL11A1P12107 1806 aaPredicted RBP22.89■■□□□ 1.26
PDLIM2-221ENST00000622702 GJB2P29033 226 aa22.89■■□□□ 1.25
PDLIM2-221ENST00000622702 CCNA1P78396 465 aa22.89■■□□□ 1.25
PDLIM2-221ENST00000622702 PORCNQ9H237 461 aa22.89■■□□□ 1.25
PDLIM2-221ENST00000622702 SRRDQ9UH36 339 aa22.89■■□□□ 1.25
PDLIM2-221ENST00000622702 KIF3AQ9Y496 699 aa22.89■■□□□ 1.25
PDLIM2-221ENST00000622702 FAM184AQ8NB25 1140 aa22.88■■□□□ 1.25
PDLIM2-221ENST00000622702 COA7Q96BR5 231 aa22.88■■□□□ 1.25
PDLIM2-221ENST00000622702 TEX13BQ9BXU2 312 aa22.88■■□□□ 1.25
PDLIM2-221ENST00000622702 RAVER2Q9HCJ3 691 aaKnown RBP22.88■■□□□ 1.25
PDLIM2-221ENST00000622702 CENPFP49454 3210 aa22.88■■□□□ 1.25
PDLIM2-221ENST00000622702 MAPK4P31152 587 aa22.87■■□□□ 1.25
PDLIM2-221ENST00000622702 SLC4A3P48751 1232 aa22.87■■□□□ 1.25
PDLIM2-221ENST00000622702 PRMT2P55345 433 aa22.87■■□□□ 1.25
PDLIM2-221ENST00000622702 PLS1Q14651 629 aa22.87■■□□□ 1.25
PDLIM2-221ENST00000622702 WWC2Q6AWC2 1192 aa22.87■■□□□ 1.25
PDLIM2-221ENST00000622702 HEATR3Q7Z4Q2 680 aa22.87■■□□□ 1.25
PDLIM2-221ENST00000622702 CPXCR1Q8N123 301 aa22.87■■□□□ 1.25
PDLIM2-221ENST00000622702 FAM177A1Q8N128 213 aaPredicted RBP22.87■■□□□ 1.25
PDLIM2-221ENST00000622702 SPATC1LQ9H0A9 340 aa22.87■■□□□ 1.25
PDLIM2-221ENST00000622702 FOXD4L1Q9NU39 408 aa22.87■■□□□ 1.25
PDLIM2-221ENST00000622702 BARHL2Q9NY43 387 aa22.87■■□□□ 1.25
PDLIM2-221ENST00000622702 CCPG1Q9ULG6 757 aa22.87■■□□□ 1.25
PDLIM2-221ENST00000622702 STAT3P40763 770 aa22.86■■□□□ 1.25
PDLIM2-221ENST00000622702 PRKCZQ05513 592 aa22.86■■□□□ 1.25
PDLIM2-221ENST00000622702 GPKOWQ92917 476 aaPredicted RBP eCLIP22.86■■□□□ 1.25
PDLIM2-221ENST00000622702 AGBL1Q96MI9 1066 aa22.86■■□□□ 1.25
PDLIM2-221ENST00000622702 AIFM3Q96NN9 605 aa22.86■■□□□ 1.25
PDLIM2-221ENST00000622702 ALG1Q9BT22 464 aa22.86■■□□□ 1.25
PDLIM2-221ENST00000622702 MOV10L1Q9BXT6 1211 aaKnown RBP22.86■■□□□ 1.25
PDLIM2-221ENST00000622702 SH3GLB2Q9NR46 395 aa22.86■■□□□ 1.25
PDLIM2-221ENST00000622702 GABRQQ9UN88 632 aa22.86■■□□□ 1.25
PDLIM2-221ENST00000622702 PCDHA1Q9Y5I3 950 aa22.86■■□□□ 1.25
PDLIM2-221ENST00000622702 PTCH2Q9Y6C5 1203 aa22.86■■□□□ 1.25
PDLIM2-221ENST00000622702 DOCK3Q8IZD9 2030 aa22.86■■□□□ 1.25
PDLIM2-221ENST00000622702 STXBP3O00186 592 aa22.85■■□□□ 1.25
PDLIM2-221ENST00000622702 WDR78Q5VTH9 848 aa22.85■■□□□ 1.25
PDLIM2-221ENST00000622702 PPP1R18Q6NYC8 613 aa22.85■■□□□ 1.25
PDLIM2-221ENST00000622702 ABHD8Q96I13 439 aa22.85■■□□□ 1.25
PDLIM2-221ENST00000622702 CWC22Q9HCG8 908 aaKnown RBP22.85■■□□□ 1.25
PDLIM2-221ENST00000622702 DAXXQ9UER7 740 aaPredicted RBP22.85■■□□□ 1.25
PDLIM2-221ENST00000622702 ABCB11O95342 1321 aa22.85■■□□□ 1.25
PDLIM2-221ENST00000622702 TKFCQ3LXA3 575 aa22.85■■□□□ 1.25
PDLIM2-221ENST00000622702 USH1GQ495M9 461 aa22.85■■□□□ 1.25
PDLIM2-221ENST00000622702 SNRNP48Q6IEG0 339 aaKnown RBP22.85■■□□□ 1.25
PDLIM2-221ENST00000622702 RIOX2Q8IUF8 465 aa22.85■■□□□ 1.25
PDLIM2-221ENST00000622702 IPO9Q96P70 1041 aaKnown RBP22.85■■□□□ 1.25
PDLIM2-221ENST00000622702 SMCHD1A6NHR9 2005 aa22.84■■□□□ 1.25
PDLIM2-221ENST00000622702 FLT3LGP49771 235 aa22.84■■□□□ 1.25
PDLIM2-221ENST00000622702 TYW1BQ6NUM6 668 aa22.84■■□□□ 1.25
PDLIM2-221ENST00000622702 GPR142Q7Z601 462 aa22.84■■□□□ 1.25
PDLIM2-221ENST00000622702 PLEKHH3Q7Z736 793 aa22.84■■□□□ 1.25
PDLIM2-221ENST00000622702 SPRYD3Q8NCJ5 442 aa22.84■■□□□ 1.25
PDLIM2-221ENST00000622702 RAET1EQ8TD07 263 aa22.84■■□□□ 1.25
PDLIM2-221ENST00000622702 CCDC12Q8WUD4 166 aaPredicted RBP22.84■■□□□ 1.25
PDLIM2-221ENST00000622702 XBP1P17861 261 aa22.83■■□□□ 1.25
PDLIM2-221ENST00000622702 COPB2P35606 906 aa22.83■■□□□ 1.25
PDLIM2-221ENST00000622702 RGS22Q8NE09 1264 aa22.83■■□□□ 1.25
PDLIM2-221ENST00000622702 CCDC148Q8NFR7 591 aa22.83■■□□□ 1.25
PDLIM2-221ENST00000622702 SHISA4Q96DD7 197 aa22.83■■□□□ 1.25
PDLIM2-221ENST00000622702 VPS54Q9P1Q0 977 aa22.83■■□□□ 1.25
PDLIM2-221ENST00000622702 MRPL11Q9Y3B7 192 aaKnown RBP22.83■■□□□ 1.25
PDLIM2-221ENST00000622702 RIPK3Q9Y572 518 aa22.83■■□□□ 1.25
PDLIM2-221ENST00000622702 ESYT2A0FGR8 921 aa22.82■■□□□ 1.24
PDLIM2-221ENST00000622702 SLC25A27O95847 323 aa22.82■■□□□ 1.24
PDLIM2-221ENST00000622702 ALAS1P13196 640 aa22.82■■□□□ 1.24
PDLIM2-221ENST00000622702 TAL1P17542 331 aaPredicted RBP22.82■■□□□ 1.24
PDLIM2-221ENST00000622702 ERCC3P19447 782 aa22.82■■□□□ 1.24
PDLIM2-221ENST00000622702 PDCP20941 246 aa22.82■■□□□ 1.24
PDLIM2-221ENST00000622702 NAPAP54920 295 aa22.82■■□□□ 1.24
PDLIM2-221ENST00000622702 NCAPG2Q86XI2 1143 aa22.82■■□□□ 1.24
PDLIM2-221ENST00000622702 SHCBP1Q8NEM2 672 aa22.82■■□□□ 1.24
PDLIM2-221ENST00000622702 C8orf76Q96K31 380 aa22.82■■□□□ 1.24
PDLIM2-221ENST00000622702 GJD2Q9UKL4 321 aa22.82■■□□□ 1.24
PDLIM2-221ENST00000622702 PLXNB2O15031 1838 aa22.82■■□□□ 1.24
PDLIM2-221ENST00000622702 CHST13Q8NET6 341 aa22.81■■□□□ 1.24
PDLIM2-221ENST00000622702 CLEC4DQ8WXI8 215 aa22.81■■□□□ 1.24
PDLIM2-221ENST00000622702 TRERF1Q96PN7 1200 aa22.81■■□□□ 1.24
PDLIM2-221ENST00000622702 MROH8Q9H579 483 aa22.81■■□□□ 1.24
PDLIM2-221ENST00000622702 RNF146Q9NTX7 359 aa22.81■■□□□ 1.24
PDLIM2-221ENST00000622702 TRIM29Q14134 588 aa22.8■■□□□ 1.24
PDLIM2-221ENST00000622702 SLC9C1Q4G0N8 1177 aa22.8■■□□□ 1.24
PDLIM2-221ENST00000622702 LARP1BQ659C4 914 aaKnown RBP22.8■■□□□ 1.24
PDLIM2-221ENST00000622702 TEX2Q8IWB9 1127 aa22.8■■□□□ 1.24
PDLIM2-221ENST00000622702 FBXO18Q8NFZ0 1043 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms