RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 SPTLC2O15270 562 aa16.25■□□□□ 0.19
CLTCL1-212ENST00000622493 ZBED4O75132 1171 aa16.25■□□□□ 0.19
CLTCL1-212ENST00000622493 CELF2O95319 508 aaKnown RBP16.25■□□□□ 0.19
CLTCL1-212ENST00000622493 CLK2P49760 499 aaKnown RBP16.25■□□□□ 0.19
CLTCL1-212ENST00000622493 SNAP25P60880 206 aa16.25■□□□□ 0.19
CLTCL1-212ENST00000622493 NONOQ15233 471 aaKnown RBP eCLIP16.25■□□□□ 0.19
CLTCL1-212ENST00000622493 USH1GQ495M9 461 aa16.25■□□□□ 0.19
CLTCL1-212ENST00000622493 CNKSR2Q8WXI2 1034 aa16.25■□□□□ 0.19
CLTCL1-212ENST00000622493 ADAMTS5Q9UNA0 930 aa16.25■□□□□ 0.19
CLTCL1-212ENST00000622493 MRPL11Q9Y3B7 192 aaKnown RBP16.25■□□□□ 0.19
CLTCL1-212ENST00000622493 ABCB11O95342 1321 aa16.25■□□□□ 0.19
CLTCL1-212ENST00000622493 PARP14Q460N5 1801 aa16.25■□□□□ 0.19
CLTCL1-212ENST00000622493 ADAMTS3O15072 1205 aa16.25■□□□□ 0.19
CLTCL1-212ENST00000622493 HOXA7P31268 230 aaPredicted RBP16.25■□□□□ 0.19
CLTCL1-212ENST00000622493 DSG3P32926 999 aa16.25■□□□□ 0.19
CLTCL1-212ENST00000622493 FMR1Q06787 632 aaKnown RBP eCLIP16.25■□□□□ 0.19
CLTCL1-212ENST00000622493 PTPAQ15257 358 aa16.25■□□□□ 0.19
CLTCL1-212ENST00000622493 CCDC174Q6PII3 467 aa16.25■□□□□ 0.19
CLTCL1-212ENST00000622493 FASTKD5Q7L8L6 764 aaKnown RBP16.25■□□□□ 0.19
CLTCL1-212ENST00000622493 RASGRP4Q8TDF6 673 aa16.25■□□□□ 0.19
CLTCL1-212ENST00000622493 BIN2Q9UBW5 565 aaPredicted RBP16.25■□□□□ 0.19
CLTCL1-212ENST00000622493 CTDP1Q9Y5B0 961 aaPredicted RBP16.25■□□□□ 0.19
CLTCL1-212ENST00000622493 LOC285556D6RIA3 1793 aa16.24■□□□□ 0.19
CLTCL1-212ENST00000622493 FAM205CA6NFA0 338 aa16.24■□□□□ 0.19
CLTCL1-212ENST00000622493 PIK3CDO00329 1044 aa16.24■□□□□ 0.19
CLTCL1-212ENST00000622493 VWA5AO00534 786 aa16.24■□□□□ 0.19
CLTCL1-212ENST00000622493 GADD45BO75293 160 aaPredicted RBP16.24■□□□□ 0.19
CLTCL1-212ENST00000622493 ME1P48163 572 aa16.24■□□□□ 0.19
CLTCL1-212ENST00000622493 OAZ1P54368 228 aa16.24■□□□□ 0.19
CLTCL1-212ENST00000622493 AP3B2Q13367 1082 aa16.24■□□□□ 0.19
CLTCL1-212ENST00000622493 TTC38Q5R3I4 469 aa16.24■□□□□ 0.19
CLTCL1-212ENST00000622493 ADALQ6DHV7 355 aa16.24■□□□□ 0.19
CLTCL1-212ENST00000622493 PCDHB6Q9Y5E3 794 aa16.24■□□□□ 0.19
CLTCL1-212ENST00000622493 ZNF536O15090 1300 aa16.24■□□□□ 0.19
CLTCL1-212ENST00000622493 FOSP01100 380 aaPredicted RBP16.23■□□□□ 0.19
CLTCL1-212ENST00000622493 ORC2Q13416 577 aaPredicted RBP16.23■□□□□ 0.19
CLTCL1-212ENST00000622493 NOM1Q5C9Z4 860 aaKnown RBP16.23■□□□□ 0.19
CLTCL1-212ENST00000622493 SAMD1Q6SPF0 538 aaPredicted RBP16.23■□□□□ 0.19
CLTCL1-212ENST00000622493 SAMD3Q8N6K7 520 aa16.23■□□□□ 0.19
CLTCL1-212ENST00000622493 GPBP1L1Q9HC44 474 aaPredicted RBP16.23■□□□□ 0.19
CLTCL1-212ENST00000622493 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.23■□□□□ 0.19
CLTCL1-212ENST00000622493 CCPG1Q9ULG6 757 aa16.23■□□□□ 0.19
CLTCL1-212ENST00000622493 RLFQ13129 1914 aa16.23■□□□□ 0.19
CLTCL1-212ENST00000622493 MEIS2O14770 477 aa16.22■□□□□ 0.19
CLTCL1-212ENST00000622493 ATP2A1O14983 1001 aa16.22■□□□□ 0.19
CLTCL1-212ENST00000622493 ATP2B1P20020 1258 aa16.22■□□□□ 0.19
CLTCL1-212ENST00000622493 SNAPC2Q13487 334 aa16.22■□□□□ 0.19
CLTCL1-212ENST00000622493 INF2Q27J81 1249 aa16.22■□□□□ 0.19
CLTCL1-212ENST00000622493 JAKMIP3Q5VZ66 844 aa16.22■□□□□ 0.19
CLTCL1-212ENST00000622493 NEK8Q86SG6 692 aa16.22■□□□□ 0.19
CLTCL1-212ENST00000622493 GPT2Q8TD30 523 aa16.22■□□□□ 0.19
CLTCL1-212ENST00000622493 PGBD1Q96JS3 809 aa16.22■□□□□ 0.19
CLTCL1-212ENST00000622493 PCDHA7Q9UN72 937 aa16.22■□□□□ 0.19
CLTCL1-212ENST00000622493 TRPM7Q96QT4 1865 aa16.22■□□□□ 0.19
CLTCL1-212ENST00000622493 A0A1W2PQ27 194 aa16.22■□□□□ 0.19
CLTCL1-212ENST00000622493 A0A1W2PQ64 194 aa16.22■□□□□ 0.19
CLTCL1-212ENST00000622493 A0A1W2PQD8 194 aa16.22■□□□□ 0.19
CLTCL1-212ENST00000622493 PABPC4Q13310 644 aaKnown RBP eCLIP16.22■□□□□ 0.19
CLTCL1-212ENST00000622493 GADL1Q6ZQY3 521 aa16.22■□□□□ 0.19
CLTCL1-212ENST00000622493 TBCKQ8TEA7 893 aa16.22■□□□□ 0.19
CLTCL1-212ENST00000622493 ATG4CQ96DT6 458 aa16.22■□□□□ 0.19
CLTCL1-212ENST00000622493 MAP3K20Q9NYL2 800 aaKnown RBP16.22■□□□□ 0.19
CLTCL1-212ENST00000622493 AGTPBP1Q9UPW5 1226 aa16.22■□□□□ 0.19
CLTCL1-212ENST00000622493 OPLAHO14841 1288 aa16.21■□□□□ 0.19
CLTCL1-212ENST00000622493 UBE2SQ16763 222 aa16.21■□□□□ 0.19
CLTCL1-212ENST00000622493 TREML2Q5T2D2 321 aa16.21■□□□□ 0.19
CLTCL1-212ENST00000622493 CST9Q5W186 159 aa16.21■□□□□ 0.19
CLTCL1-212ENST00000622493 USP17L6PQ6QN14 398 aa16.21■□□□□ 0.19
CLTCL1-212ENST00000622493 MCF2L2Q86YR7 1114 aa16.21■□□□□ 0.19
CLTCL1-212ENST00000622493 REPS2Q8NFH8 660 aa16.21■□□□□ 0.19
CLTCL1-212ENST00000622493 AGBL1Q96MI9 1066 aa16.21■□□□□ 0.19
CLTCL1-212ENST00000622493 NAP1L4Q99733 375 aaKnown RBP16.21■□□□□ 0.19
CLTCL1-212ENST00000622493 TMEM260Q9NX78 707 aa16.21■□□□□ 0.19
CLTCL1-212ENST00000622493 SPDYE16A6NNV3 312 aaPredicted RBP16.2■□□□□ 0.18
CLTCL1-212ENST00000622493 ZBTB48P10074 688 aaPredicted RBP16.2■□□□□ 0.18
CLTCL1-212ENST00000622493 ZNF174Q15697 407 aa16.2■□□□□ 0.18
CLTCL1-212ENST00000622493 LBX2Q6XYB7 198 aa16.2■□□□□ 0.18
CLTCL1-212ENST00000622493 CPXCR1Q8N123 301 aa16.2■□□□□ 0.18
CLTCL1-212ENST00000622493 MB21D1Q8N884 522 aa16.2■□□□□ 0.18
CLTCL1-212ENST00000622493 KRI1Q8N9T8 703 aaKnown RBP16.2■□□□□ 0.18
CLTCL1-212ENST00000622493 WNK4Q96J92 1243 aa16.2■□□□□ 0.18
CLTCL1-212ENST00000622493 MAF1Q9H063 256 aa16.2■□□□□ 0.18
CLTCL1-212ENST00000622493 RAVER2Q9HCJ3 691 aaKnown RBP16.2■□□□□ 0.18
CLTCL1-212ENST00000622493 SPDYE3A6NKU9 549 aa16.19■□□□□ 0.18
CLTCL1-212ENST00000622493 GCOM1H8Y6P7 765 aaPredicted RBP16.19■□□□□ 0.18
CLTCL1-212ENST00000622493 LAD1O00515 517 aa16.19■□□□□ 0.18
CLTCL1-212ENST00000622493 POLR2MP0CAP2 368 aa16.19■□□□□ 0.18
CLTCL1-212ENST00000622493 PTPREP23469 700 aa16.19■□□□□ 0.18
CLTCL1-212ENST00000622493 MARCKSP29966 332 aaPredicted RBP16.19■□□□□ 0.18
CLTCL1-212ENST00000622493 GJA5P36382 358 aa16.19■□□□□ 0.18
CLTCL1-212ENST00000622493 GTF2A2P52657 109 aa16.19■□□□□ 0.18
CLTCL1-212ENST00000622493 ATP2C1P98194 919 aaPredicted RBP16.19■□□□□ 0.18
CLTCL1-212ENST00000622493 GHRHRQ02643 423 aa16.19■□□□□ 0.18
CLTCL1-212ENST00000622493 ARL6IP4Q66PJ3 421 aaKnown RBP16.19■□□□□ 0.18
CLTCL1-212ENST00000622493 SYAP1Q96A49 352 aaPredicted RBP16.19■□□□□ 0.18
CLTCL1-212ENST00000622493 ANO3Q9BYT9 981 aa16.19■□□□□ 0.18
CLTCL1-212ENST00000622493 SRPRBQ9Y5M8 271 aaKnown RBP16.19■□□□□ 0.18
CLTCL1-212ENST00000622493 WNT7AO00755 349 aa16.19■□□□□ 0.18
CLTCL1-212ENST00000622493 CUTAO60888 179 aa16.19■□□□□ 0.18
CLTCL1-212ENST00000622493 CETPP11597 493 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms