RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 SLF1Q9BQI6 1058 aa17.59■□□□□ 0.41
SNX12-206ENST00000622259 FTOQ9C0B1 505 aaKnown RBP eCLIP17.59■□□□□ 0.41
SNX12-206ENST00000622259 RAVER2Q9HCJ3 691 aaKnown RBP17.59■□□□□ 0.41
SNX12-206ENST00000622259 SWAP70Q9UH65 585 aa17.59■□□□□ 0.41
SNX12-206ENST00000622259 PTPRZ1P23471 2315 aaPredicted RBP17.59■□□□□ 0.41
SNX12-206ENST00000622259 TANC1Q9C0D5 1861 aa17.58■□□□□ 0.41
SNX12-206ENST00000622259 CACNA1HO95180 2353 aa17.58■□□□□ 0.41
SNX12-206ENST00000622259 ANP32CO43423 234 aa17.58■□□□□ 0.4
SNX12-206ENST00000622259 API5Q9BZZ5 524 aaKnown RBP17.58■□□□□ 0.4
SNX12-206ENST00000622259 AP5M1Q9H0R1 490 aa17.58■□□□□ 0.4
SNX12-206ENST00000622259 CCDC8Q9H0W5 538 aaPredicted RBP17.58■□□□□ 0.4
SNX12-206ENST00000622259 CYP2D7A0A087X1C5 515 aa17.57■□□□□ 0.4
SNX12-206ENST00000622259 SOWAHBA6NEL2 793 aa17.57■□□□□ 0.4
SNX12-206ENST00000622259 ATP2A1O14983 1001 aa17.57■□□□□ 0.4
SNX12-206ENST00000622259 ZEB2O60315 1214 aa17.57■□□□□ 0.4
SNX12-206ENST00000622259 SUPT20HL2P0C7V6 817 aa17.57■□□□□ 0.4
SNX12-206ENST00000622259 RFC2P35250 354 aa17.57■□□□□ 0.4
SNX12-206ENST00000622259 IRS1P35568 1242 aa17.57■□□□□ 0.4
SNX12-206ENST00000622259 ERVK-21P61565 698 aa17.57■□□□□ 0.4
SNX12-206ENST00000622259 DEFB103AP81534 67 aa17.57■□□□□ 0.4
SNX12-206ENST00000622259 FAM133AQ8N9E0 248 aa17.57■□□□□ 0.4
SNX12-206ENST00000622259 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.57■□□□□ 0.4
SNX12-206ENST00000622259 CRNKL1Q9BZJ0 848 aaKnown RBP17.57■□□□□ 0.4
SNX12-206ENST00000622259 FAM86C1Q9NVL1 165 aa17.57■□□□□ 0.4
SNX12-206ENST00000622259 SIP14410 1827 aa17.56■□□□□ 0.4
SNX12-206ENST00000622259 LINC01553A4QN01 128 aa17.56■□□□□ 0.4
SNX12-206ENST00000622259 GFRA3O60609 400 aa17.56■□□□□ 0.4
SNX12-206ENST00000622259 CDK8P49336 464 aa17.56■□□□□ 0.4
SNX12-206ENST00000622259 PTPN5P54829 565 aa17.56■□□□□ 0.4
SNX12-206ENST00000622259 WDR5P61964 334 aaKnown RBP17.56■□□□□ 0.4
SNX12-206ENST00000622259 GPNMBQ14956 572 aa17.56■□□□□ 0.4
SNX12-206ENST00000622259 TAPT1Q6NXT6 567 aa17.56■□□□□ 0.4
SNX12-206ENST00000622259 LCORLQ8N3X6 602 aa17.56■□□□□ 0.4
SNX12-206ENST00000622259 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.56■□□□□ 0.4
SNX12-206ENST00000622259 GOPCQ9HD26 462 aa17.56■□□□□ 0.4
SNX12-206ENST00000622259 MUTYHQ9UIF7 546 aa17.56■□□□□ 0.4
SNX12-206ENST00000622259 BAZ2AQ9UIF9 1905 aaKnown RBP17.55■□□□□ 0.4
SNX12-206ENST00000622259 BAIAP3O94812 1187 aa17.55■□□□□ 0.4
SNX12-206ENST00000622259 TCTN1Q2MV58 587 aa17.55■□□□□ 0.4
SNX12-206ENST00000622259 PUS10Q3MIT2 529 aaKnown RBP17.55■□□□□ 0.4
SNX12-206ENST00000622259 EEPD1Q7L9B9 569 aa17.55■□□□□ 0.4
SNX12-206ENST00000622259 FBXO16Q8IX29 292 aaPredicted RBP17.55■□□□□ 0.4
SNX12-206ENST00000622259 CCDC17Q96LX7 622 aa17.55■□□□□ 0.4
SNX12-206ENST00000622259 TGS1Q96RS0 853 aaKnown RBP17.55■□□□□ 0.4
SNX12-206ENST00000622259 ALG13Q9NP73 1137 aaKnown RBP17.55■□□□□ 0.4
SNX12-206ENST00000622259 TRIP12Q14669 1992 aaPredicted RBP17.54■□□□□ 0.4
SNX12-206ENST00000622259 E9PSI1 815 aa17.54■□□□□ 0.4
SNX12-206ENST00000622259 PRKAB2O43741 272 aa17.54■□□□□ 0.4
SNX12-206ENST00000622259 KCNJ6P48051 423 aa17.54■□□□□ 0.4
SNX12-206ENST00000622259 ADHFE1Q8IWW8 467 aa17.54■□□□□ 0.4
SNX12-206ENST00000622259 EAF2Q96CJ1 260 aaPredicted RBP17.54■□□□□ 0.4
SNX12-206ENST00000622259 KANSL2Q9H9L4 492 aa17.54■□□□□ 0.4
SNX12-206ENST00000622259 SLC38A10Q9HBR0 1119 aa17.54■□□□□ 0.4
SNX12-206ENST00000622259 MYO7AQ13402 2215 aa17.53■□□□□ 0.4
SNX12-206ENST00000622259 PITPNM1O00562 1244 aa17.53■□□□□ 0.4
SNX12-206ENST00000622259 GNAI2P04899 355 aa17.53■□□□□ 0.4
SNX12-206ENST00000622259 PDE6AP16499 860 aa17.53■□□□□ 0.4
SNX12-206ENST00000622259 PURAQ00577 322 aaKnown RBP17.53■□□□□ 0.4
SNX12-206ENST00000622259 SLFN5Q08AF3 891 aa17.53■□□□□ 0.4
SNX12-206ENST00000622259 PRPF38AQ8NAV1 312 aaKnown RBP17.53■□□□□ 0.4
SNX12-206ENST00000622259 CHST13Q8NET6 341 aa17.53■□□□□ 0.4
SNX12-206ENST00000622259 KIFC2Q96AC6 838 aa17.53■□□□□ 0.4
SNX12-206ENST00000622259 C17orf80Q9BSJ5 609 aa17.53■□□□□ 0.4
SNX12-206ENST00000622259 ZBED2Q9BTP6 218 aa17.53■□□□□ 0.4
SNX12-206ENST00000622259 HOMER2Q9NSB8 354 aa17.53■□□□□ 0.4
SNX12-206ENST00000622259 PRKAG3Q9UGI9 489 aa17.53■□□□□ 0.4
SNX12-206ENST00000622259 SCN10AQ9Y5Y9 1956 aa17.53■□□□□ 0.4
SNX12-206ENST00000622259 ZBED4O75132 1171 aa17.52■□□□□ 0.4
SNX12-206ENST00000622259 GJB5O95377 273 aa17.52■□□□□ 0.4
SNX12-206ENST00000622259 NDUFB10O96000 172 aa17.52■□□□□ 0.4
SNX12-206ENST00000622259 POLA2Q14181 598 aa17.52■□□□□ 0.4
SNX12-206ENST00000622259 NBPF20Q3BBV1 942 aa17.52■□□□□ 0.4
SNX12-206ENST00000622259 HERC4Q5GLZ8 1057 aaPredicted RBP17.52■□□□□ 0.4
SNX12-206ENST00000622259 FAM9BQ8IZU0 186 aa17.52■□□□□ 0.4
SNX12-206ENST00000622259 RETREG2Q8NC44 543 aa17.52■□□□□ 0.4
SNX12-206ENST00000622259 A1CFQ9NQ94 594 aaKnown RBP17.52■□□□□ 0.4
SNX12-206ENST00000622259 FBXO40Q9UH90 709 aa17.52■□□□□ 0.4
SNX12-206ENST00000622259 Q9Y3F1 56 aa17.52■□□□□ 0.4
SNX12-206ENST00000622259 ZNF532Q9HCE3 1301 aa17.51■□□□□ 0.39
SNX12-206ENST00000622259 TCRBV5S4A2TA0A5A2 114 aa17.51■□□□□ 0.39
SNX12-206ENST00000622259 F5H6K3 240 aa17.51■□□□□ 0.39
SNX12-206ENST00000622259 KLRC3Q07444 240 aa17.51■□□□□ 0.39
SNX12-206ENST00000622259 OS9Q13438 667 aaPredicted RBP17.51■□□□□ 0.39
SNX12-206ENST00000622259 SLFNL1Q499Z3 407 aa17.51■□□□□ 0.39
SNX12-206ENST00000622259 FAM47CQ5HY64 1035 aa17.51■□□□□ 0.39
SNX12-206ENST00000622259 SLC9C2Q5TAH2 1124 aa17.51■□□□□ 0.39
SNX12-206ENST00000622259 IQSEC1Q6DN90 963 aa17.51■□□□□ 0.39
SNX12-206ENST00000622259 TMED8Q6PL24 325 aaPredicted RBP17.51■□□□□ 0.39
SNX12-206ENST00000622259 C16orf86Q6ZW13 317 aa17.51■□□□□ 0.39
SNX12-206ENST00000622259 MIER1Q8N108 512 aa17.51■□□□□ 0.39
SNX12-206ENST00000622259 RAD9AQ99638 391 aa17.51■□□□□ 0.39
SNX12-206ENST00000622259 ARMT1Q9H993 441 aa17.51■□□□□ 0.39
SNX12-206ENST00000622259 TNNQ9UQP3 1299 aa17.51■□□□□ 0.39
SNX12-206ENST00000622259 GREB1LQ9C091 1923 aaPredicted RBP17.51■□□□□ 0.39
SNX12-206ENST00000622259 RIF1Q5UIP0 2472 aaKnown RBP17.5■□□□□ 0.39
SNX12-206ENST00000622259 ASB14A6NK59 587 aa17.5■□□□□ 0.39
SNX12-206ENST00000622259 MYL3P08590 195 aa17.5■□□□□ 0.39
SNX12-206ENST00000622259 TCEAL5Q5H9L2 206 aa17.5■□□□□ 0.39
SNX12-206ENST00000622259 C12orf60Q5U649 245 aa17.5■□□□□ 0.39
SNX12-206ENST00000622259 FAM117BQ6P1L5 589 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms