RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 NUCKS1Q9H1E3 243 aaKnown RBP11.52□□□□□ -0.57
COL25A1-209ENST00000622134 MARCKSP29966 332 aaPredicted RBP11.52□□□□□ -0.57
COL25A1-209ENST00000622134 BIRC2Q13490 618 aa11.52□□□□□ -0.57
COL25A1-209ENST00000622134 CUL4AQ13619 759 aa11.52□□□□□ -0.57
COL25A1-209ENST00000622134 CALCRLQ16602 461 aa11.52□□□□□ -0.57
COL25A1-209ENST00000622134 LRRC23Q53EV4 343 aaPredicted RBP11.52□□□□□ -0.57
COL25A1-209ENST00000622134 FASTKD5Q7L8L6 764 aaKnown RBP11.52□□□□□ -0.57
COL25A1-209ENST00000622134 ZNF654Q8IZM8 581 aa11.52□□□□□ -0.57
COL25A1-209ENST00000622134 ABI1Q8IZP0 508 aa11.52□□□□□ -0.57
COL25A1-209ENST00000622134 GTF3C2Q8WUA4 911 aaPredicted RBP11.52□□□□□ -0.57
COL25A1-209ENST00000622134 SECISBP2LQ93073 1101 aaKnown RBP11.52□□□□□ -0.57
COL25A1-209ENST00000622134 PARD6BQ9BYG5 372 aa11.52□□□□□ -0.57
COL25A1-209ENST00000622134 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.52□□□□□ -0.57
COL25A1-209ENST00000622134 MTRF1LQ9UGC7 380 aaKnown RBP11.52□□□□□ -0.57
COL25A1-209ENST00000622134 ZBTB12Q9Y330 459 aaPredicted RBP11.52□□□□□ -0.57
COL25A1-209ENST00000622134 SAR1BQ9Y6B6 198 aa11.52□□□□□ -0.57
COL25A1-209ENST00000622134 RIMS1Q86UR5 1692 aaKnown RBP11.51□□□□□ -0.57
COL25A1-209ENST00000622134 PNMA6EA0A0J9YXQ4 647 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 CCNT1O60563 726 aaKnown RBP11.51□□□□□ -0.57
COL25A1-209ENST00000622134 SLFN14P0C7P3 912 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 ECE1P42892 770 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 CEP128Q6ZU80 1094 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 ATP6V0A1Q93050 837 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 TEKT3Q9BXF9 490 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 MTIF3Q9H2K0 278 aaKnown RBP11.51□□□□□ -0.57
COL25A1-209ENST00000622134 MMRN2Q9H8L6 949 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 HACL1Q9UJ83 578 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 YARSP54577 528 aaKnown RBP11.51□□□□□ -0.57
COL25A1-209ENST00000622134 UBXN1Q04323 297 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 VWA3BQ502W6 1294 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 CNPY4Q8N129 248 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 ARMC2Q8NEN0 867 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 UBLCP1Q8WVY7 318 aaPredicted RBP11.51□□□□□ -0.57
COL25A1-209ENST00000622134 ZNRF3Q9ULT6 936 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 CD2APQ9Y5K6 639 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 SPHKAPQ2M3C7 1700 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 CETN3O15182 167 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 PHKA1P46020 1223 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 PRPF4BQ13523 1007 aaKnown RBP11.51□□□□□ -0.57
COL25A1-209ENST00000622134 RETREG2Q8NC44 543 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 CCDC26Q8TAB7 109 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 HOXC10Q9NYD6 342 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 TSKSQ9UJT2 592 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 BMP3P12645 472 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 CTDSPL2Q05D32 466 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 SLC15A2Q16348 729 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 TMEM179Q6ZVK1 233 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 DIS3L2Q8IYB7 885 aaKnown RBP11.51□□□□□ -0.57
COL25A1-209ENST00000622134 SNX29Q8TEQ0 813 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 RAB3IPQ96QF0 476 aaPredicted RBP11.51□□□□□ -0.57
COL25A1-209ENST00000622134 FAM184BQ9ULE4 1060 aa11.51□□□□□ -0.57
COL25A1-209ENST00000622134 TRPM1Q7Z4N2 1603 aa11.5□□□□□ -0.57
COL25A1-209ENST00000622134 SMCO2A6NFE2 343 aa11.5□□□□□ -0.57
COL25A1-209ENST00000622134 TRIM28Q13263 835 aaKnown RBP11.5□□□□□ -0.57
COL25A1-209ENST00000622134 TMEM106CQ9BVX2 250 aa11.5□□□□□ -0.57
COL25A1-209ENST00000622134 MTFR1LQ9H019 292 aa11.5□□□□□ -0.57
COL25A1-209ENST00000622134 VCX3BQ9H321 246 aa11.5□□□□□ -0.57
COL25A1-209ENST00000622134 VCX3AQ9NNX9 186 aa11.5□□□□□ -0.57
COL25A1-209ENST00000622134 KLRF2D3W0D1 207 aa11.5□□□□□ -0.57
COL25A1-209ENST00000622134 H7C1W4 665 aa11.5□□□□□ -0.57
COL25A1-209ENST00000622134 MTX1Q13505 466 aa11.5□□□□□ -0.57
COL25A1-209ENST00000622134 LRRC24Q50LG9 513 aa11.5□□□□□ -0.57
COL25A1-209ENST00000622134 STYK1Q6J9G0 422 aa11.5□□□□□ -0.57
COL25A1-209ENST00000622134 PIK3AP1Q6ZUJ8 805 aa11.5□□□□□ -0.57
COL25A1-209ENST00000622134 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.5□□□□□ -0.57
COL25A1-209ENST00000622134 NACA2Q9H009 215 aa11.5□□□□□ -0.57
COL25A1-209ENST00000622134 LARSQ9P2J5 1176 aaKnown RBP11.5□□□□□ -0.57
COL25A1-209ENST00000622134 MYO1AQ9UBC5 1043 aa11.5□□□□□ -0.57
COL25A1-209ENST00000622134 ECE2O60344 883 aa11.5□□□□□ -0.57
COL25A1-209ENST00000622134 RPS12P25398 132 aaKnown RBP11.5□□□□□ -0.57
COL25A1-209ENST00000622134 CCHCR1Q8TD31 782 aa11.5□□□□□ -0.57
COL25A1-209ENST00000622134 LRFN2Q9ULH4 789 aa11.5□□□□□ -0.57
COL25A1-209ENST00000622134 MTMR6Q9Y217 621 aa11.5□□□□□ -0.57
COL25A1-209ENST00000622134 CD2BP2O95400 341 aaKnown RBP11.49□□□□□ -0.57
COL25A1-209ENST00000622134 RASSF2P50749 326 aa11.49□□□□□ -0.57
COL25A1-209ENST00000622134 ZBTB16Q05516 673 aa11.49□□□□□ -0.57
COL25A1-209ENST00000622134 KIAA1468Q9P260 1216 aa11.49□□□□□ -0.57
COL25A1-209ENST00000622134 CLTCL1P53675 1640 aa11.49□□□□□ -0.57
COL25A1-209ENST00000622134 TXKP42681 527 aa11.49□□□□□ -0.57
COL25A1-209ENST00000622134 KCNQ4P56696 695 aa11.49□□□□□ -0.57
COL25A1-209ENST00000622134 CC2D1AQ6P1N0 951 aaPredicted RBP11.49□□□□□ -0.57
COL25A1-209ENST00000622134 TTLL11Q8NHH1 800 aa11.49□□□□□ -0.57
COL25A1-209ENST00000622134 JAKMIP2Q96AA8 810 aa11.49□□□□□ -0.57
COL25A1-209ENST00000622134 PLEKHF1Q96S99 279 aa11.49□□□□□ -0.57
COL25A1-209ENST00000622134 TLDC2A0PJX2 215 aa11.49□□□□□ -0.57
COL25A1-209ENST00000622134 HARSP12081 509 aaKnown RBP11.49□□□□□ -0.57
COL25A1-209ENST00000622134 NBPF9Q3BBW0 867 aa11.49□□□□□ -0.57
COL25A1-209ENST00000622134 GABPB2Q8TAK5 448 aaPredicted RBP11.49□□□□□ -0.57
COL25A1-209ENST00000622134 SEC31BQ9NQW1 1179 aa11.49□□□□□ -0.57
COL25A1-209ENST00000622134 PSD3Q9NYI0 1048 aa11.49□□□□□ -0.57
COL25A1-209ENST00000622134 KCNH4Q9UQ05 1017 aa11.49□□□□□ -0.57
COL25A1-209ENST00000622134 SETBP1Q9Y6X0 1596 aa11.49□□□□□ -0.57
COL25A1-209ENST00000622134 CNTNAP4Q9C0A0 1308 aa11.49□□□□□ -0.57
COL25A1-209ENST00000622134 CUTAO60888 179 aa11.49□□□□□ -0.57
COL25A1-209ENST00000622134 GNAT1P11488 350 aa11.49□□□□□ -0.57
COL25A1-209ENST00000622134 SREK1Q8WXA9 508 aaKnown RBP11.49□□□□□ -0.57
COL25A1-209ENST00000622134 PPANQ9NQ55 473 aaKnown RBP11.49□□□□□ -0.57
COL25A1-209ENST00000622134 PLCB1Q9NQ66 1216 aa11.49□□□□□ -0.57
COL25A1-209ENST00000622134 NKIRAS1Q9NYS0 192 aa11.49□□□□□ -0.57
COL25A1-209ENST00000622134 PCDHB13Q9Y5F0 798 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms