RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	FAM47A	Q5JRC9	791 aa		16	■□□□□ 0.15
SYNRG-231	ENST00000622045	AMOTL1	Q8IY63	956 aa		16	■□□□□ 0.15
SYNRG-231	ENST00000622045	CCDC43	Q96MW1	224 aa	Known RBP	16	■□□□□ 0.15
SYNRG-231	ENST00000622045	HPD	P32754	393 aa	Predicted RBP	16	■□□□□ 0.15
SYNRG-231	ENST00000622045	TBC1D8B	Q0IIM8	1120 aa		16	■□□□□ 0.15
SYNRG-231	ENST00000622045	ADGRA1	Q86SQ6	560 aa		16	■□□□□ 0.15
SYNRG-231	ENST00000622045	EHBP1	Q8NDI1	1231 aa		16	■□□□□ 0.15
SYNRG-231	ENST00000622045	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	16	■□□□□ 0.15
SYNRG-231	ENST00000622045	USP17L12	C9JPN9	530 aa		16	■□□□□ 0.15
SYNRG-231	ENST00000622045	USP17L21	D6R901	530 aa		16	■□□□□ 0.15
SYNRG-231	ENST00000622045	BACH1	O14867	736 aa		16	■□□□□ 0.15
SYNRG-231	ENST00000622045	MOCS3	O95396	460 aa		16	■□□□□ 0.15
SYNRG-231	ENST00000622045	TJP1	Q07157	1748 aa		16	■□□□□ 0.15
SYNRG-231	ENST00000622045	SF3B2	Q13435	895 aa	Known RBP	16	■□□□□ 0.15
SYNRG-231	ENST00000622045	IQCE	Q6IPM2	695 aa		16	■□□□□ 0.15
SYNRG-231	ENST00000622045	MTR	Q99707	1265 aa		16	■□□□□ 0.15
SYNRG-231	ENST00000622045	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	SCG2	P13521	617 aa		15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	NF2	P35240	595 aa		15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	GYG1	P46976	350 aa		15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	HDLBP	Q00341	1268 aa	Known RBP	15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	KIF5A	Q12840	1032 aa		15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	CCDC152	Q4G0S7	254 aa		15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	NAA35	Q5VZE5	725 aa		15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	PDXDC2P	Q6P474	469 aa		15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	MST1R	Q04912	1400 aa		15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	NMT2	O60551	498 aa		15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	PLEK	P08567	350 aa	Predicted RBP	15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	LSP1	P33241	339 aa		15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	PMS1	P54277	932 aa	Known RBP	15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	TROAP	Q12815	778 aa		15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	SF3A3	Q12874	501 aa	Known RBP eCLIP	15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	TMTC3	Q6ZXV5	915 aa		15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	SRBD1	Q8N5C6	995 aa	Known RBP	15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	SPATA4	Q8NEY3	305 aa		15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	SCLT1	Q96NL6	688 aa		15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	PPAN	Q9NQ55	473 aa	Known RBP	15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	CAPN6	Q9Y6Q1	641 aa		15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	KCP	Q6ZWJ8	1503 aa		15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	TRPM3	Q9HCF6	1732 aa	Predicted RBP	15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	CYP19A1	P11511	503 aa	Predicted RBP	15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	MTIF2	P46199	727 aa	Known RBP	15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	RNASE9	P60153	205 aa	Known RBP	15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	E2F5	Q15329	346 aa		15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	DTHD1	Q6ZMT9	781 aa		15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	CREG2	Q8IUH2	290 aa		15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	CSGALNACT2	Q8N6G5	542 aa		15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	RASGRP4	Q8TDF6	673 aa		15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	KLC4	Q9NSK0	619 aa		15.99	■□□□□ 0.15
SYNRG-231	ENST00000622045	CCDC194	A0A1B0GVG4	234 aa		15.98	■□□□□ 0.15
SYNRG-231	ENST00000622045	PPP2R5A	Q15172	486 aa		15.98	■□□□□ 0.15
SYNRG-231	ENST00000622045	SPA17	Q15506	151 aa		15.98	■□□□□ 0.15
SYNRG-231	ENST00000622045	SUSD4	Q5VX71	490 aa		15.98	■□□□□ 0.15
SYNRG-231	ENST00000622045	NID2	Q14112	1375 aa		15.98	■□□□□ 0.15
SYNRG-231	ENST00000622045	LGALS16	A8MUM7	142 aa		15.98	■□□□□ 0.15
SYNRG-231	ENST00000622045	NAP1L1	P55209	391 aa	Known RBP	15.98	■□□□□ 0.15
SYNRG-231	ENST00000622045	FUT2	Q10981	343 aa		15.98	■□□□□ 0.15
SYNRG-231	ENST00000622045	CCDC40	Q4G0X9	1142 aa		15.98	■□□□□ 0.15
SYNRG-231	ENST00000622045	CFAP58	Q5T655	872 aa		15.98	■□□□□ 0.15
SYNRG-231	ENST00000622045	IRF2BP1	Q8IU81	584 aa		15.98	■□□□□ 0.15
SYNRG-231	ENST00000622045	ZNF473	Q8WTR7	871 aa	Known RBP	15.98	■□□□□ 0.15
SYNRG-231	ENST00000622045	NFU1	Q9UMS0	254 aa		15.98	■□□□□ 0.15
SYNRG-231	ENST00000622045		E7EVH7	732 aa		15.98	■□□□□ 0.15
SYNRG-231	ENST00000622045	FAM153B	P0C7A2	387 aa		15.98	■□□□□ 0.15
SYNRG-231	ENST00000622045	CHRND	Q07001	517 aa		15.98	■□□□□ 0.15
SYNRG-231	ENST00000622045	FAM153C	Q494X1	144 aa		15.98	■□□□□ 0.15
SYNRG-231	ENST00000622045	CCDC47	Q96A33	483 aa	Known RBP	15.98	■□□□□ 0.15
SYNRG-231	ENST00000622045	CCDC114	Q96M63	670 aa		15.98	■□□□□ 0.15
SYNRG-231	ENST00000622045	FAM153A	Q9UHL3	310 aa		15.98	■□□□□ 0.15
SYNRG-231	ENST00000622045	ODF2L	Q9ULJ1	636 aa		15.98	■□□□□ 0.15
SYNRG-231	ENST00000622045	TSPY2	A6NKD2	308 aa		15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	CHUK	O15111	745 aa		15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	PDHB	P11177	359 aa		15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	VEGFA	P15692	232 aa	Predicted RBP	15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	ELF1	P32519	619 aa		15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	CDR1	P51861	262 aa		15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	NEDD9	Q14511	834 aa		15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	CEP85L	Q5SZL2	805 aa		15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	RPAIN	Q86UA6	219 aa		15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	MS4A14	Q96JA4	679 aa		15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	SLC24A3	Q9HC58	644 aa		15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	AKAP11	Q9UKA4	1901 aa		15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	PP2D1	A8MPX8	630 aa		15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	DNM2	P50570	870 aa		15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	IL17A	Q16552	155 aa		15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	CCDC42	Q96M95	316 aa		15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	SNX12	Q9UMY4	172 aa		15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	FSBP	O95073	299 aa		15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	ERCC3	P19447	782 aa		15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	TRAPPC10	P48553	1259 aa		15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	DNAJC7	Q99615	494 aa		15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	TUBGCP2	Q9BSJ2	902 aa		15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	MYH7	P12883	1935 aa		15.97	■□□□□ 0.15
SYNRG-231	ENST00000622045	EEF1G	P26641	437 aa	Known RBP	15.96	■□□□□ 0.15
SYNRG-231	ENST00000622045	LONP1	P36776	959 aa	Known RBP	15.96	■□□□□ 0.15
SYNRG-231	ENST00000622045	CARS	P49589	748 aa	Known RBP	15.96	■□□□□ 0.15
SYNRG-231	ENST00000622045	EPHB4	P54760	987 aa		15.96	■□□□□ 0.15
SYNRG-231	ENST00000622045	CCDC178	Q5BJE1	867 aa		15.96	■□□□□ 0.15

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms