RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 RNF225M0QZC1 329 aaPredicted RBP10.6□□□□□ -0.71
PDPN-212ENST00000621990 PSMA7O14818 248 aa10.6□□□□□ -0.71
PDPN-212ENST00000621990 CCNT1O60563 726 aaKnown RBP10.6□□□□□ -0.71
PDPN-212ENST00000621990 STIM1Q13586 685 aa10.6□□□□□ -0.71
PDPN-212ENST00000621990 RSRC2Q7L4I2 434 aaKnown RBP10.6□□□□□ -0.71
PDPN-212ENST00000621990 REXO1Q8N1G1 1221 aaKnown RBP10.6□□□□□ -0.71
PDPN-212ENST00000621990 MNS1Q8NEH6 495 aa10.6□□□□□ -0.71
PDPN-212ENST00000621990 CPLX3Q8WVH0 158 aa10.6□□□□□ -0.71
PDPN-212ENST00000621990 PIGSQ96S52 555 aa10.6□□□□□ -0.71
PDPN-212ENST00000621990 MMTAG2Q9BU76 263 aaKnown RBP10.6□□□□□ -0.71
PDPN-212ENST00000621990 CARD6Q9BX69 1037 aa10.6□□□□□ -0.71
PDPN-212ENST00000621990 TRIM9Q9C026 710 aa10.6□□□□□ -0.71
PDPN-212ENST00000621990 VPS16Q9H269 839 aa10.6□□□□□ -0.71
PDPN-212ENST00000621990 TAB2Q9NYJ8 693 aa10.6□□□□□ -0.71
PDPN-212ENST00000621990 TTF2Q9UNY4 1162 aaKnown RBP10.6□□□□□ -0.71
PDPN-212ENST00000621990 AFF2P51816 1311 aa10.6□□□□□ -0.71
PDPN-212ENST00000621990 PPP1R2P41236 205 aa10.6□□□□□ -0.71
PDPN-212ENST00000621990 ERVK-24P63145 666 aa10.6□□□□□ -0.71
PDPN-212ENST00000621990 DMTNQ08495 405 aa10.6□□□□□ -0.71
PDPN-212ENST00000621990 LETM2Q2VYF4 491 aa10.6□□□□□ -0.71
PDPN-212ENST00000621990 CYP26C1Q6V0L0 522 aa10.6□□□□□ -0.71
PDPN-212ENST00000621990 ATP6V0A2Q9Y487 856 aa10.6□□□□□ -0.71
PDPN-212ENST00000621990 TRIM49BA6NDI0 452 aa10.59□□□□□ -0.71
PDPN-212ENST00000621990 PPEF1O14829 653 aaPredicted RBP10.59□□□□□ -0.71
PDPN-212ENST00000621990 FXR2P51116 673 aaKnown RBP eCLIP10.59□□□□□ -0.71
PDPN-212ENST00000621990 CLCN6P51797 869 aa10.59□□□□□ -0.71
PDPN-212ENST00000621990 SOGA3Q5TF21 947 aa10.59□□□□□ -0.71
PDPN-212ENST00000621990 PPP1R18Q6NYC8 613 aa10.59□□□□□ -0.71
PDPN-212ENST00000621990 MB21D1Q8N884 522 aa10.59□□□□□ -0.71
PDPN-212ENST00000621990 TBCKQ8TEA7 893 aa10.59□□□□□ -0.71
PDPN-212ENST00000621990 DNAJC7Q99615 494 aa10.59□□□□□ -0.71
PDPN-212ENST00000621990 ZMYND15Q9H091 742 aa10.59□□□□□ -0.71
PDPN-212ENST00000621990 TRPC5Q9UL62 973 aaPredicted RBP10.59□□□□□ -0.71
PDPN-212ENST00000621990 MAPK8IP1Q9UQF2 711 aa10.59□□□□□ -0.71
PDPN-212ENST00000621990 MTMR7Q9Y216 660 aa10.59□□□□□ -0.71
PDPN-212ENST00000621990 EDIL3O43854 480 aa10.59□□□□□ -0.71
PDPN-212ENST00000621990 ZRANB2O95218 330 aaKnown RBP eCLIP10.59□□□□□ -0.71
PDPN-212ENST00000621990 PPP2R3AQ06190 1150 aa10.59□□□□□ -0.71
PDPN-212ENST00000621990 TUBB2AQ13885 445 aa10.59□□□□□ -0.71
PDPN-212ENST00000621990 KRT222Q8N1A0 295 aa10.59□□□□□ -0.71
PDPN-212ENST00000621990 RASSF8Q8NHQ8 419 aa10.59□□□□□ -0.71
PDPN-212ENST00000621990 DUSP9Q99956 384 aaKnown RBP10.59□□□□□ -0.71
PDPN-212ENST00000621990 TUBB2BQ9BVA1 445 aa10.59□□□□□ -0.71
PDPN-212ENST00000621990 MYO1AQ9UBC5 1043 aa10.59□□□□□ -0.71
PDPN-212ENST00000621990 SWAP70Q9UH65 585 aa10.59□□□□□ -0.71
PDPN-212ENST00000621990 KIF5CO60282 957 aa10.58□□□□□ -0.72
PDPN-212ENST00000621990 GTF2IP78347 998 aa10.58□□□□□ -0.72
PDPN-212ENST00000621990 UBXN1Q04323 297 aa10.58□□□□□ -0.72
PDPN-212ENST00000621990 CNNM4Q6P4Q7 775 aa10.58□□□□□ -0.72
PDPN-212ENST00000621990 IRX2Q9BZI1 471 aaPredicted RBP10.58□□□□□ -0.72
PDPN-212ENST00000621990 ADAMTSL1Q8N6G6 1762 aa10.58□□□□□ -0.72
PDPN-212ENST00000621990 BRWD3Q6RI45 1802 aa10.58□□□□□ -0.72
PDPN-212ENST00000621990 A0A0U1RQJ8 604 aa10.58□□□□□ -0.72
PDPN-212ENST00000621990 BICDL2A1A5D9 508 aa10.58□□□□□ -0.72
PDPN-212ENST00000621990 C6orf229H3BNL8 230 aa10.58□□□□□ -0.72
PDPN-212ENST00000621990 SRGNP10124 158 aa10.58□□□□□ -0.72
PDPN-212ENST00000621990 COL11A2P13942 1736 aaPredicted RBP10.58□□□□□ -0.72
PDPN-212ENST00000621990 CCNE1P24864 410 aa10.58□□□□□ -0.72
PDPN-212ENST00000621990 ARHGAP25P42331 645 aa10.58□□□□□ -0.72
PDPN-212ENST00000621990 POTEDQ86YR6 584 aa10.58□□□□□ -0.72
PDPN-212ENST00000621990 CERS5Q8N5B7 392 aa10.58□□□□□ -0.72
PDPN-212ENST00000621990 GPR161Q8N6U8 529 aaKnown RBP10.58□□□□□ -0.72
PDPN-212ENST00000621990 ATRIPQ8WXE1 791 aa10.58□□□□□ -0.72
PDPN-212ENST00000621990 NUP88Q99567 741 aaPredicted RBP10.58□□□□□ -0.72
PDPN-212ENST00000621990 TTYH3Q9C0H2 523 aa10.58□□□□□ -0.72
PDPN-212ENST00000621990 LZTFL1Q9NQ48 299 aa10.58□□□□□ -0.72
PDPN-212ENST00000621990 DDX4Q9NQI0 724 aaKnown RBP10.58□□□□□ -0.72
PDPN-212ENST00000621990 CAPN11Q9UMQ6 739 aa10.58□□□□□ -0.72
PDPN-212ENST00000621990 FHOD1Q9Y613 1164 aa10.58□□□□□ -0.72
PDPN-212ENST00000621990 ZNF646O15015 1829 aaPredicted RBP10.57□□□□□ -0.72
PDPN-212ENST00000621990 TTLL1O95922 423 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 AKR1B1P15121 316 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 HOXA7P31268 230 aaPredicted RBP10.57□□□□□ -0.72
PDPN-212ENST00000621990 KRT9P35527 623 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 TECP42680 631 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 CLK2P49760 499 aaKnown RBP10.57□□□□□ -0.72
PDPN-212ENST00000621990 DNM2P50570 870 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 ADCY7P51828 1080 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 AMPD3Q01432 767 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 GABPB1Q06547 395 aaPredicted RBP10.57□□□□□ -0.72
PDPN-212ENST00000621990 ZNF543Q08ER8 600 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 PDIA5Q14554 519 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 ZSCAN29Q8IWY8 852 aaPredicted RBP10.57□□□□□ -0.72
PDPN-212ENST00000621990 RABGGTAQ92696 567 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 P2RX5Q93086 422 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 UBA5Q9GZZ9 404 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 ARGLU1Q9NWB6 273 aaPredicted RBP10.57□□□□□ -0.72
PDPN-212ENST00000621990 BIN2Q9UBW5 565 aaPredicted RBP10.57□□□□□ -0.72
PDPN-212ENST00000621990 STK17AQ9UEE5 414 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 MYH4Q9Y623 1939 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 SIPA1L1O43166 1804 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 TTC26A0AVF1 554 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 HMGB2P26583 209 aaKnown RBP10.57□□□□□ -0.72
PDPN-212ENST00000621990 BMS1Q14692 1282 aaKnown RBP10.57□□□□□ -0.72
PDPN-212ENST00000621990 MEA1Q16626 185 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 PPP4R3CPQ6ZMV5 832 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 ZNF662Q6ZS27 426 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 RETREG2Q8NC44 543 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 OR8K1Q8NGG5 319 aa10.57□□□□□ -0.72
PDPN-212ENST00000621990 CCDC47Q96A33 483 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms