RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 TC2NQ8N9U0 490 aa19.76■□□□□ 0.75
FAM3A-222ENST00000621967 EPSTI1Q96J88 318 aa19.76■□□□□ 0.75
FAM3A-222ENST00000621967 TEPSINQ96N21 525 aa19.76■□□□□ 0.75
FAM3A-222ENST00000621967 MYH8P13535 1937 aa19.75■□□□□ 0.75
FAM3A-222ENST00000621967 hCG_1642624A0A1W2PR95 340 aa19.75■□□□□ 0.75
FAM3A-222ENST00000621967 ZSCAN12O43309 604 aa19.75■□□□□ 0.75
FAM3A-222ENST00000621967 GOLGA8FQ08AF8 430 aa19.75■□□□□ 0.75
FAM3A-222ENST00000621967 GOLGA8DPQ0D2H9 430 aa19.75■□□□□ 0.75
FAM3A-222ENST00000621967 ELF2Q15723 593 aa19.75■□□□□ 0.75
FAM3A-222ENST00000621967 KMT5BQ4FZB7 885 aa19.75■□□□□ 0.75
FAM3A-222ENST00000621967 MAP1SQ66K74 1059 aaPredicted RBP19.75■□□□□ 0.75
FAM3A-222ENST00000621967 C16orf86Q6ZW13 317 aa19.75■□□□□ 0.75
FAM3A-222ENST00000621967 SYMPKQ92797 1274 aaKnown RBP19.75■□□□□ 0.75
FAM3A-222ENST00000621967 DHX58Q96C10 678 aa19.75■□□□□ 0.75
FAM3A-222ENST00000621967 HOOK2Q96ED9 719 aa19.75■□□□□ 0.75
FAM3A-222ENST00000621967 MKNK2Q9HBH9 465 aa19.75■□□□□ 0.75
FAM3A-222ENST00000621967 SWAP70Q9UH65 585 aa19.75■□□□□ 0.75
FAM3A-222ENST00000621967 SIPA1L1O43166 1804 aa19.74■□□□□ 0.75
FAM3A-222ENST00000621967 A0A1B0GTH6 734 aa19.74■□□□□ 0.75
FAM3A-222ENST00000621967 STX10O60499 249 aa19.74■□□□□ 0.75
FAM3A-222ENST00000621967 ATP2C1P98194 919 aaPredicted RBP19.74■□□□□ 0.75
FAM3A-222ENST00000621967 NR1I3Q14994 352 aa19.74■□□□□ 0.75
FAM3A-222ENST00000621967 PTPN21Q16825 1174 aa19.74■□□□□ 0.75
FAM3A-222ENST00000621967 PRAMEF18Q5VWM3 479 aa19.74■□□□□ 0.75
FAM3A-222ENST00000621967 HOMER1Q86YM7 354 aa19.74■□□□□ 0.75
FAM3A-222ENST00000621967 SRBD1Q8N5C6 995 aaKnown RBP19.74■□□□□ 0.75
FAM3A-222ENST00000621967 SLC44A5Q8NCS7 719 aa19.74■□□□□ 0.75
FAM3A-222ENST00000621967 PAGE5Q96GU1 130 aa19.74■□□□□ 0.75
FAM3A-222ENST00000621967 GLIS2Q9BZE0 524 aaPredicted RBP19.74■□□□□ 0.75
FAM3A-222ENST00000621967 SAMSN1Q9NSI8 373 aaKnown RBP19.74■□□□□ 0.75
FAM3A-222ENST00000621967 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.74■□□□□ 0.75
FAM3A-222ENST00000621967 HERC5Q9UII4 1024 aaKnown RBP19.74■□□□□ 0.75
FAM3A-222ENST00000621967 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.74■□□□□ 0.75
FAM3A-222ENST00000621967 V9GYY5 206 aaPredicted RBP19.74■□□□□ 0.75
FAM3A-222ENST00000621967 CDK11BP21127 795 aaKnown RBP19.74■□□□□ 0.75
FAM3A-222ENST00000621967 DPYDQ12882 1025 aa19.74■□□□□ 0.75
FAM3A-222ENST00000621967 CUL4BQ13620 913 aa19.74■□□□□ 0.75
FAM3A-222ENST00000621967 TTC38Q5R3I4 469 aa19.74■□□□□ 0.75
FAM3A-222ENST00000621967 NBPF12Q5TAG4 269 aaPredicted RBP19.74■□□□□ 0.75
FAM3A-222ENST00000621967 APTXQ7Z2E3 356 aaKnown RBP19.74■□□□□ 0.75
FAM3A-222ENST00000621967 GSDMAQ96QA5 445 aa19.74■□□□□ 0.75
FAM3A-222ENST00000621967 FAM196BA6NMK8 535 aa19.73■□□□□ 0.75
FAM3A-222ENST00000621967 CDK8P49336 464 aa19.73■□□□□ 0.75
FAM3A-222ENST00000621967 GABPAQ06546 454 aa19.73■□□□□ 0.75
FAM3A-222ENST00000621967 SUPT20HL1Q3ZLR7 823 aa19.73■□□□□ 0.75
FAM3A-222ENST00000621967 HSP90AA4PQ58FG1 418 aa19.73■□□□□ 0.75
FAM3A-222ENST00000621967 NOM1Q5C9Z4 860 aaKnown RBP19.73■□□□□ 0.75
FAM3A-222ENST00000621967 CTCFLQ8NI51 663 aaPredicted RBP19.73■□□□□ 0.75
FAM3A-222ENST00000621967 BAG1Q99933 345 aaPredicted RBP19.73■□□□□ 0.75
FAM3A-222ENST00000621967 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.73■□□□□ 0.75
FAM3A-222ENST00000621967 PPP2R2CQ9Y2T4 447 aa19.73■□□□□ 0.75
FAM3A-222ENST00000621967 FANCGO15287 622 aa19.72■□□□□ 0.75
FAM3A-222ENST00000621967 TRAPPC10P48553 1259 aa19.72■□□□□ 0.75
FAM3A-222ENST00000621967 UTP14CQ5TAP6 766 aaKnown RBP19.72■□□□□ 0.75
FAM3A-222ENST00000621967 SPATA1Q5VX52 437 aa19.72■□□□□ 0.75
FAM3A-222ENST00000621967 FBXO38Q6PIJ6 1188 aa19.72■□□□□ 0.75
FAM3A-222ENST00000621967 MIGA2Q7L4E1 593 aa19.72■□□□□ 0.75
FAM3A-222ENST00000621967 VWA3AA6NCI4 1184 aa19.72■□□□□ 0.75
FAM3A-222ENST00000621967 GOLGA6L9A6NEM1 432 aa19.72■□□□□ 0.75
FAM3A-222ENST00000621967 SLURP2P0DP57 97 aa19.72■□□□□ 0.75
FAM3A-222ENST00000621967 SCG2P13521 617 aa19.72■□□□□ 0.75
FAM3A-222ENST00000621967 NT5C2P49902 561 aa19.72■□□□□ 0.75
FAM3A-222ENST00000621967 DMTNQ08495 405 aa19.72■□□□□ 0.75
FAM3A-222ENST00000621967 DCAF15Q66K64 600 aa19.72■□□□□ 0.75
FAM3A-222ENST00000621967 DNAJC18Q9H819 358 aa19.72■□□□□ 0.75
FAM3A-222ENST00000621967 PRDM10Q9NQV6 1147 aa19.72■□□□□ 0.75
FAM3A-222ENST00000621967 DNAI1Q9UI46 699 aa19.72■□□□□ 0.75
FAM3A-222ENST00000621967 SYNRGQ9UMZ2 1314 aa19.71■□□□□ 0.75
FAM3A-222ENST00000621967 NMT2O60551 498 aa19.71■□□□□ 0.75
FAM3A-222ENST00000621967 CD44P16070 742 aaKnown RBP19.71■□□□□ 0.75
FAM3A-222ENST00000621967 NF2P35240 595 aa19.71■□□□□ 0.75
FAM3A-222ENST00000621967 ZNF174Q15697 407 aa19.71■□□□□ 0.75
FAM3A-222ENST00000621967 PFKFB3Q16875 520 aaPredicted RBP19.71■□□□□ 0.75
FAM3A-222ENST00000621967 CDKAL1Q5VV42 579 aa19.71■□□□□ 0.75
FAM3A-222ENST00000621967 DLK2Q6UY11 383 aa19.71■□□□□ 0.75
FAM3A-222ENST00000621967 ZNF444Q8N0Y2 327 aaPredicted RBP19.71■□□□□ 0.75
FAM3A-222ENST00000621967 CDCA5Q96FF9 252 aa19.71■□□□□ 0.75
FAM3A-222ENST00000621967 TBC1D12O60347 775 aa19.7■□□□□ 0.74
FAM3A-222ENST00000621967 SHMT1P34896 483 aa19.7■□□□□ 0.74
FAM3A-222ENST00000621967 AFMP43652 599 aa19.7■□□□□ 0.74
FAM3A-222ENST00000621967 PTGDRQ13258 359 aa19.7■□□□□ 0.74
FAM3A-222ENST00000621967 E2F4Q16254 413 aa19.7■□□□□ 0.74
FAM3A-222ENST00000621967 RCSD1Q6JBY9 416 aa19.7■□□□□ 0.74
FAM3A-222ENST00000621967 CHADLQ6NUI6 762 aa19.7■□□□□ 0.74
FAM3A-222ENST00000621967 LRRN4CLQ8ND94 238 aa19.7■□□□□ 0.74
FAM3A-222ENST00000621967 SRRTQ9BXP5 876 aaKnown RBP19.7■□□□□ 0.74
FAM3A-222ENST00000621967 H2AFXP16104 143 aaPredicted RBP19.7■□□□□ 0.74
FAM3A-222ENST00000621967 PBX1P40424 430 aa19.7■□□□□ 0.74
FAM3A-222ENST00000621967 FAM53CQ9NYF3 392 aa19.7■□□□□ 0.74
FAM3A-222ENST00000621967 PRDM4Q9UKN5 801 aa19.7■□□□□ 0.74
FAM3A-222ENST00000621967 TSPY2A6NKD2 308 aa19.69■□□□□ 0.74
FAM3A-222ENST00000621967 PPP1R3GB7ZBB8 358 aa19.69■□□□□ 0.74
FAM3A-222ENST00000621967 FAM47AQ5JRC9 791 aa19.69■□□□□ 0.74
FAM3A-222ENST00000621967 PYM1Q9BRP8 204 aaKnown RBP19.69■□□□□ 0.74
FAM3A-222ENST00000621967 GTPBP4Q9BZE4 634 aaKnown RBP19.69■□□□□ 0.74
FAM3A-222ENST00000621967 TSPY3P0CV98 308 aa19.68■□□□□ 0.74
FAM3A-222ENST00000621967 TSPY8P0CW00 308 aa19.68■□□□□ 0.74
FAM3A-222ENST00000621967 RASA1P20936 1047 aa19.68■□□□□ 0.74
FAM3A-222ENST00000621967 ADKP55263 362 aaKnown RBP19.68■□□□□ 0.74
FAM3A-222ENST00000621967 ERCC6LQ2NKX8 1250 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms