RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 PABPN1LA6NDY0 278 aaKnown RBP10.23□□□□□ -0.77
GGA3-223ENST00000621870 CMA1P23946 247 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 CKAP4Q07065 602 aaKnown RBP10.23□□□□□ -0.77
GGA3-223ENST00000621870 VWA3BQ502W6 1294 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 PDXDC2PQ6P474 469 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 TBC1D10CQ8IV04 446 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 GOLGA1Q92805 767 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 MMS19Q96T76 1030 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 MXD3Q9BW11 206 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 PANK4Q9NVE7 773 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 TRPM1Q7Z4N2 1603 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 UTYO14607 1347 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 MYZAPP0CAP1 466 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 KLHL30Q0D2K2 578 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 DMP1Q13316 513 aaPredicted RBP10.23□□□□□ -0.77
GGA3-223ENST00000621870 SLC9C1Q4G0N8 1177 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 SLC16A10Q8TF71 515 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 POMGNT1Q8WZA1 660 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 CDHR1Q96JP9 859 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 WDR11Q9BZH6 1224 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 RAVER2Q9HCJ3 691 aaKnown RBP10.23□□□□□ -0.77
GGA3-223ENST00000621870 NUB1Q9Y5A7 615 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 PCDHA5Q9Y5H7 936 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 ABCA6Q8N139 1617 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 CPS1P31327 1500 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 POLR3GO15318 223 aaPredicted RBP10.22□□□□□ -0.77
GGA3-223ENST00000621870 LPXNO60711 386 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 LARGE1O95461 756 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 ABL1P00519 1130 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 MAGEA1P43355 309 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 NDUFA8P51970 172 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 ATG9AQ7Z3C6 839 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 CCDC91Q7Z6B0 441 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 LRRC45Q96CN5 670 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 FAM193BQ96PV7 902 aaPredicted RBP10.22□□□□□ -0.77
GGA3-223ENST00000621870 PPP1R16BQ96T49 567 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 CSRNP2Q9H175 543 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 FOXP1Q9H334 677 aaPredicted RBP10.22□□□□□ -0.77
GGA3-223ENST00000621870 TMEM191BP0C7N4 346 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 ASIC2Q16515 512 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 LONRF3Q496Y0 759 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 MTERF2Q49AM1 385 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 RNF207Q6ZRF8 634 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 APOBEC3FQ8IUX4 373 aaKnown RBP10.22□□□□□ -0.77
GGA3-223ENST00000621870 ABI1Q8IZP0 508 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 RMDN3Q96TC7 470 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 CTTNBP2NLQ9P2B4 639 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 IQSEC2Q5JU85 1478 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 CROCC2H7BZ55 1655 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 PDE4DIPQ5VU43 2346 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 USP42Q9H9J4 1324 aaKnown RBP10.22□□□□□ -0.77
GGA3-223ENST00000621870 CD163L1Q9NR16 1453 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 USP17L15C9J2P7 530 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 USP17L13C9JLJ4 530 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 USP17L11C9JVI0 530 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 USP17L18D6R9N7 530 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 USP17L22D6RA61 530 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 USP17L17D6RBQ6 530 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 USP17L19D6RCP7 530 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 USP17L20D6RJB6 530 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 NTSR2O95665 410 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 BCRP11274 1271 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 GCFC2P16383 781 aaKnown RBP10.22□□□□□ -0.77
GGA3-223ENST00000621870 MARK3P27448 753 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 MAP2K1Q02750 393 aaPredicted RBP10.22□□□□□ -0.77
GGA3-223ENST00000621870 USP17L24Q0WX57 530 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 NFX1Q12986 1120 aaKnown RBP10.22□□□□□ -0.77
GGA3-223ENST00000621870 SLC39A14Q15043 492 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 RABL6Q3YEC7 729 aaPredicted RBP10.22□□□□□ -0.77
GGA3-223ENST00000621870 SNRNP48Q6IEG0 339 aaKnown RBP10.22□□□□□ -0.77
GGA3-223ENST00000621870 USP17L6PQ6QN14 398 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 RRAGAQ7L523 313 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 CCDC25Q86WR0 208 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 USTQ9Y2C2 406 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 SSX2IPQ9Y2D8 614 aa10.22□□□□□ -0.77
GGA3-223ENST00000621870 PNMA6FA0A0J9YX94 578 aa10.21□□□□□ -0.77
GGA3-223ENST00000621870 GSG1L2A8MUP6 293 aa10.21□□□□□ -0.77
GGA3-223ENST00000621870 DAPK3O43293 454 aa10.21□□□□□ -0.77
GGA3-223ENST00000621870 RFX1P22670 979 aa10.21□□□□□ -0.77
GGA3-223ENST00000621870 LONP1P36776 959 aaKnown RBP10.21□□□□□ -0.77
GGA3-223ENST00000621870 SYT10Q6XYQ8 523 aa10.21□□□□□ -0.77
GGA3-223ENST00000621870 KRBA2Q6ZNG9 492 aa10.21□□□□□ -0.77
GGA3-223ENST00000621870 PPM1KQ8N3J5 372 aa10.21□□□□□ -0.77
GGA3-223ENST00000621870 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.21□□□□□ -0.77
GGA3-223ENST00000621870 MAK16Q9BXY0 300 aaKnown RBP10.21□□□□□ -0.77
GGA3-223ENST00000621870 HOXC10Q9NYD6 342 aa10.21□□□□□ -0.77
GGA3-223ENST00000621870 AGTPBP1Q9UPW5 1226 aa10.21□□□□□ -0.77
GGA3-223ENST00000621870 RGS12O14924 1447 aa10.21□□□□□ -0.77
GGA3-223ENST00000621870 TRAPPC10P48553 1259 aa10.21□□□□□ -0.78
GGA3-223ENST00000621870 KIF23Q02241 960 aaPredicted RBP10.21□□□□□ -0.78
GGA3-223ENST00000621870 STRIP1Q5VSL9 837 aa10.21□□□□□ -0.78
GGA3-223ENST00000621870 COL23A1Q86Y22 540 aaPredicted RBP10.21□□□□□ -0.78
GGA3-223ENST00000621870 LARP4BQ92615 738 aaKnown RBP10.21□□□□□ -0.78
GGA3-223ENST00000621870 RPS6KC1Q96S38 1066 aa10.21□□□□□ -0.78
GGA3-223ENST00000621870 FAM49AQ9H0Q0 323 aaPredicted RBP10.21□□□□□ -0.78
GGA3-223ENST00000621870 ZKSCAN5Q9Y2L8 839 aa10.21□□□□□ -0.78
GGA3-223ENST00000621870 BCORL1Q5H9F3 1711 aa10.21□□□□□ -0.78
GGA3-223ENST00000621870 PLEKHG2Q9H7P9 1386 aa10.21□□□□□ -0.78
GGA3-223ENST00000621870 LRRC7Q96NW7 1537 aa10.21□□□□□ -0.78
GGA3-223ENST00000621870 PALM3A6NDB9 673 aaPredicted RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 462.3 ms