RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 CCSAPQ6IQ19 270 aaPredicted RBP28.22■■■□□ 2.11
ATXN3-253ENST00000621269 NOL8Q76FK4 1167 aaKnown RBP28.22■■■□□ 2.11
ATXN3-253ENST00000621269 DEFB123Q8N688 67 aa28.22■■■□□ 2.11
ATXN3-253ENST00000621269 TRIM43Q96BQ3 446 aaPredicted RBP28.22■■■□□ 2.11
ATXN3-253ENST00000621269 ZKSCAN3Q9BRR0 538 aa28.22■■■□□ 2.11
ATXN3-253ENST00000621269 KATNBL1Q9H079 304 aa28.22■■■□□ 2.11
ATXN3-253ENST00000621269 MYADML2A6NDP7 307 aa28.21■■■□□ 2.11
ATXN3-253ENST00000621269 TNFAIP2Q03169 654 aa28.21■■■□□ 2.11
ATXN3-253ENST00000621269 CCDC178Q5BJE1 867 aa28.21■■■□□ 2.11
ATXN3-253ENST00000621269 VTI1AQ96AJ9 217 aa28.21■■■□□ 2.11
ATXN3-253ENST00000621269 GLT1D1Q96MS3 346 aa28.21■■■□□ 2.11
ATXN3-253ENST00000621269 UPF3AQ9H1J1 476 aaKnown RBP28.21■■■□□ 2.11
ATXN3-253ENST00000621269 PNMA2Q9UL42 364 aa28.21■■■□□ 2.11
ATXN3-253ENST00000621269 LAMA3Q16787 3333 aa28.2■■■□□ 2.11
ATXN3-253ENST00000621269 DCDC2CA8MYV0 355 aa28.2■■■□□ 2.1
ATXN3-253ENST00000621269 ZNF543Q08ER8 600 aa28.2■■■□□ 2.1
ATXN3-253ENST00000621269 IMMTQ16891 758 aaKnown RBP28.2■■■□□ 2.1
ATXN3-253ENST00000621269 GNASQ5JWF2 1037 aa28.2■■■□□ 2.1
ATXN3-253ENST00000621269 IQCA1Q86XH1 822 aa28.2■■■□□ 2.1
ATXN3-253ENST00000621269 DGKHQ86XP1 1220 aa28.2■■■□□ 2.1
ATXN3-253ENST00000621269 DSCC1Q9BVC3 393 aa28.2■■■□□ 2.1
ATXN3-253ENST00000621269 CTNNA3Q9UI47 895 aa28.2■■■□□ 2.1
ATXN3-253ENST00000621269 ASGR1P07306 291 aa28.19■■■□□ 2.1
ATXN3-253ENST00000621269 ANKRD33Q7Z3H0 272 aa28.19■■■□□ 2.1
ATXN3-253ENST00000621269 TOX2Q96NM4 488 aa28.19■■■□□ 2.1
ATXN3-253ENST00000621269 TMEM39AQ9NV64 488 aa28.19■■■□□ 2.1
ATXN3-253ENST00000621269 LTBP2Q14767 1821 aa28.19■■■□□ 2.1
ATXN3-253ENST00000621269 ELP1O95163 1332 aa28.18■■■□□ 2.1
ATXN3-253ENST00000621269 KDM4AO75164 1064 aa28.18■■■□□ 2.1
ATXN3-253ENST00000621269 SNHG28P0DPA3 235 aa28.18■■■□□ 2.1
ATXN3-253ENST00000621269 IRX5P78411 483 aaPredicted RBP28.18■■■□□ 2.1
ATXN3-253ENST00000621269 ADD3Q9UEY8 706 aaKnown RBP28.18■■■□□ 2.1
ATXN3-253ENST00000621269 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.17■■■□□ 2.1
ATXN3-253ENST00000621269 PTPDC1A2A3K4 754 aa28.17■■■□□ 2.1
ATXN3-253ENST00000621269 KIAA0355O15063 1070 aa28.17■■■□□ 2.1
ATXN3-253ENST00000621269 RAG1P15918 1043 aa28.17■■■□□ 2.1
ATXN3-253ENST00000621269 BAATQ14032 418 aaPredicted RBP28.17■■■□□ 2.1
ATXN3-253ENST00000621269 GPATCH4Q5T3I0 446 aaKnown RBP28.17■■■□□ 2.1
ATXN3-253ENST00000621269 Q7L0L9 218 aa28.17■■■□□ 2.1
ATXN3-253ENST00000621269 KAT14Q9H8E8 782 aa28.17■■■□□ 2.1
ATXN3-253ENST00000621269 ASTN1O14525 1302 aa28.17■■■□□ 2.1
ATXN3-253ENST00000621269 MROH7Q68CQ1 1323 aa28.17■■■□□ 2.1
ATXN3-253ENST00000621269 NFIBO00712 420 aa28.16■■■□□ 2.1
ATXN3-253ENST00000621269 FAAP100Q0VG06 881 aa28.16■■■□□ 2.1
ATXN3-253ENST00000621269 SHHQ15465 462 aa28.16■■■□□ 2.1
ATXN3-253ENST00000621269 EEPD1Q7L9B9 569 aa28.16■■■□□ 2.1
ATXN3-253ENST00000621269 PURBQ96QR8 312 aaKnown RBP28.16■■■□□ 2.1
ATXN3-253ENST00000621269 AP5M1Q9H0R1 490 aa28.16■■■□□ 2.1
ATXN3-253ENST00000621269 B4E1Z4 1266 aa28.15■■■□□ 2.1
ATXN3-253ENST00000621269 GOLGA8HP0CJ92 632 aa28.15■■■□□ 2.1
ATXN3-253ENST00000621269 TTC22Q5TAA0 569 aa28.15■■■□□ 2.1
ATXN3-253ENST00000621269 IQSEC1Q6DN90 963 aa28.15■■■□□ 2.1
ATXN3-253ENST00000621269 PNMA1Q8ND90 353 aa28.15■■■□□ 2.1
ATXN3-253ENST00000621269 ZSCAN10Q96SZ4 725 aaPredicted RBP28.15■■■□□ 2.1
ATXN3-253ENST00000621269 KRT23Q9C075 422 aa28.15■■■□□ 2.1
ATXN3-253ENST00000621269 DDX49Q9Y6V7 483 aaKnown RBP28.15■■■□□ 2.1
ATXN3-253ENST00000621269 A0A0U1RQG5 324 aaPredicted RBP28.14■■■□□ 2.1
ATXN3-253ENST00000621269 ITGB8P26012 769 aa28.14■■■□□ 2.1
ATXN3-253ENST00000621269 PDE4AP27815 886 aa28.14■■■□□ 2.1
ATXN3-253ENST00000621269 NKX3-2P78367 333 aa28.14■■■□□ 2.1
ATXN3-253ENST00000621269 C9orf50Q5SZB4 431 aa28.14■■■□□ 2.1
ATXN3-253ENST00000621269 TLK2Q86UE8 772 aa28.14■■■□□ 2.1
ATXN3-253ENST00000621269 FBXO16Q8IX29 292 aaPredicted RBP28.14■■■□□ 2.1
ATXN3-253ENST00000621269 CNNM2Q9H8M5 875 aa28.14■■■□□ 2.1
ATXN3-253ENST00000621269 VTA1Q9NP79 307 aa28.14■■■□□ 2.1
ATXN3-253ENST00000621269 PDGFCQ9NRA1 345 aa28.14■■■□□ 2.1
ATXN3-253ENST00000621269 GNEQ9Y223 722 aaKnown RBP28.14■■■□□ 2.1
ATXN3-253ENST00000621269 MCM3APO60318 1980 aa28.13■■■□□ 2.09
ATXN3-253ENST00000621269 CTAGE5O15320 804 aa28.13■■■□□ 2.09
ATXN3-253ENST00000621269 SMPD1P17405 629 aa28.13■■■□□ 2.09
ATXN3-253ENST00000621269 CALML3P27482 149 aa28.13■■■□□ 2.09
ATXN3-253ENST00000621269 IRX6P78412 446 aaPredicted RBP28.13■■■□□ 2.09
ATXN3-253ENST00000621269 BEX3Q00994 111 aa28.13■■■□□ 2.09
ATXN3-253ENST00000621269 TAPT1Q6NXT6 567 aa28.13■■■□□ 2.09
ATXN3-253ENST00000621269 RNF207Q6ZRF8 634 aa28.13■■■□□ 2.09
ATXN3-253ENST00000621269 MORC4Q8TE76 937 aa28.13■■■□□ 2.09
ATXN3-253ENST00000621269 CLEC4DQ8WXI8 215 aa28.13■■■□□ 2.09
ATXN3-253ENST00000621269 ZSWIM5Q9P217 1185 aa28.13■■■□□ 2.09
ATXN3-253ENST00000621269 WDR19Q8NEZ3 1342 aa28.13■■■□□ 2.09
ATXN3-253ENST00000621269 LOC102724159A0A0B4J2E5 919 aa28.12■■■□□ 2.09
ATXN3-253ENST00000621269 ARVCFO00192 962 aa28.12■■■□□ 2.09
ATXN3-253ENST00000621269 DYNC1LI2O43237 492 aaPredicted RBP28.12■■■□□ 2.09
ATXN3-253ENST00000621269 ZEB2O60315 1214 aa28.12■■■□□ 2.09
ATXN3-253ENST00000621269 CDK7P50613 346 aa28.12■■■□□ 2.09
ATXN3-253ENST00000621269 ALDH5A1P51649 535 aaPredicted RBP28.12■■■□□ 2.09
ATXN3-253ENST00000621269 PWP2Q15269 919 aaKnown RBP28.12■■■□□ 2.09
ATXN3-253ENST00000621269 FSCN1Q16658 493 aaKnown RBP28.12■■■□□ 2.09
ATXN3-253ENST00000621269 KIAA1211Q6ZU35 1233 aa28.12■■■□□ 2.09
ATXN3-253ENST00000621269 ANKS1AQ92625 1134 aa28.12■■■□□ 2.09
ATXN3-253ENST00000621269 MPHOSPH6Q99547 160 aaKnown RBP28.12■■■□□ 2.09
ATXN3-253ENST00000621269 UBA5Q9GZZ9 404 aa28.12■■■□□ 2.09
ATXN3-253ENST00000621269 MTMR10Q9NXD2 777 aa28.12■■■□□ 2.09
ATXN3-253ENST00000621269 LAMA4Q16363 1823 aa28.12■■■□□ 2.09
ATXN3-253ENST00000621269 GSPT1P15170 499 aaKnown RBP28.11■■■□□ 2.09
ATXN3-253ENST00000621269 FPGSQ05932 587 aa28.11■■■□□ 2.09
ATXN3-253ENST00000621269 SLC30A10Q6XR72 485 aa28.11■■■□□ 2.09
ATXN3-253ENST00000621269 UBAC1Q9BSL1 405 aa28.11■■■□□ 2.09
ATXN3-253ENST00000621269 Q9Y3F1 56 aa28.11■■■□□ 2.09
ATXN3-253ENST00000621269 TLR3O15455 904 aaKnown RBP28.1■■■□□ 2.09
ATXN3-253ENST00000621269 CABYRO75952 493 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms