RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 MPHOSPH10O00566 681 aaKnown RBP7.74□□□□□ -1.17
NEDD9-216ENST00000620854 SSR1P43307 286 aaKnown RBP7.74□□□□□ -1.17
NEDD9-216ENST00000620854 ARID5AQ03989 594 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 TUBB2AQ13885 445 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 TCERG1LQ5VWI1 586 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 C2CD5Q86YS7 1000 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 CSGALNACT2Q8N6G5 542 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 MB21D1Q8N884 522 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 GPKOWQ92917 476 aaPredicted RBP eCLIP7.74□□□□□ -1.17
NEDD9-216ENST00000620854 CCDC51Q96ER9 411 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 UIMC1Q96RL1 719 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 TUBB2BQ9BVA1 445 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 MYH15Q9Y2K3 1946 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 LTN1O94822 1766 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 TOPAZ1Q8N9V7 1692 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 OVOS2A0A0G2JMS6 1433 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 TMCO5BA8MYB1 307 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 ECM2O94769 699 aaPredicted RBP7.74□□□□□ -1.17
NEDD9-216ENST00000620854 ZNF76P36508 570 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 SEC24CP53992 1094 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 GSTO1P78417 241 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 GUCY1A3Q02108 690 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 APBA1Q02410 837 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 MMS22LQ6ZRQ5 1243 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 ZNF444Q8N0Y2 327 aaPredicted RBP7.74□□□□□ -1.17
NEDD9-216ENST00000620854 OTUD6BQ8N6M0 293 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 CRNKL1Q9BZJ0 848 aaKnown RBP7.74□□□□□ -1.17
NEDD9-216ENST00000620854 MMRN2Q9H8L6 949 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 CNNM2Q9H8M5 875 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 KDM3BQ7LBC6 1761 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 USO1O60763 962 aaKnown RBP7.73□□□□□ -1.17
NEDD9-216ENST00000620854 HNRNPH1P31943 449 aaKnown RBP7.73□□□□□ -1.17
NEDD9-216ENST00000620854 PRPF4BQ13523 1007 aaKnown RBP7.73□□□□□ -1.17
NEDD9-216ENST00000620854 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.73□□□□□ -1.17
NEDD9-216ENST00000620854 LPIN2Q92539 896 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 CAPN6Q9Y6Q1 641 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 RPS8P62241 208 aaKnown RBP7.73□□□□□ -1.17
NEDD9-216ENST00000620854 KRT83P78385 493 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 VPS72Q15906 364 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 PKN1Q16512 942 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 EP400NLQ6ZTU2 488 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 TMC4Q7Z404 712 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 IRF2BP1Q8IU81 584 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 TSEN2Q8NCE0 465 aaKnown RBP7.73□□□□□ -1.17
NEDD9-216ENST00000620854 SECISBP2LQ93073 1101 aaKnown RBP7.73□□□□□ -1.17
NEDD9-216ENST00000620854 TUBGCP2Q9BSJ2 902 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 SEC63Q9UGP8 760 aaKnown RBP7.73□□□□□ -1.17
NEDD9-216ENST00000620854 LIMA1Q9UHB6 759 aaKnown RBP7.73□□□□□ -1.17
NEDD9-216ENST00000620854 CYLC1P35663 651 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-216ENST00000620854 SPAG1Q07617 926 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 IL17AQ16552 155 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 TMEM132AQ24JP5 1023 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 ENAHQ8N8S7 591 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-216ENST00000620854 EYA3Q99504 573 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 GOPCQ9HD26 462 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 MYO1AQ9UBC5 1043 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 RWDD2AQ9UIY3 292 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 SPATA31A1Q5TZJ5 1347 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 MROH5Q6ZUA9 1318 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 MED1Q15648 1581 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-216ENST00000620854 ERVV-1B6SEH8 477 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 TUBBP07437 444 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 DYNLL1P63167 89 aaKnown RBP7.73□□□□□ -1.17
NEDD9-216ENST00000620854 CKAP4Q07065 602 aaKnown RBP7.73□□□□□ -1.17
NEDD9-216ENST00000620854 IFFO1Q0D2I5 559 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 DYDC1Q8WWB3 177 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 ESR2Q92731 530 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 MYCBPQ99417 103 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-216ENST00000620854 NOC4LQ9BVI4 516 aaKnown RBP7.73□□□□□ -1.17
NEDD9-216ENST00000620854 IFIH1Q9BYX4 1025 aaKnown RBP7.73□□□□□ -1.17
NEDD9-216ENST00000620854 PPANQ9NQ55 473 aaKnown RBP7.73□□□□□ -1.17
NEDD9-216ENST00000620854 TCP11L1Q9NUJ3 509 aa7.73□□□□□ -1.17
NEDD9-216ENST00000620854 PACSIN2Q9UNF0 486 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-216ENST00000620854 MEGF6O75095 1541 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.72□□□□□ -1.17
NEDD9-216ENST00000620854 TCRBV5S4A2TA0A5A2 114 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 F8W031 263 aaPredicted RBP7.72□□□□□ -1.17
NEDD9-216ENST00000620854 PSMD14O00487 310 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 RIMBP2O15034 1052 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 RPS6KA5O75582 802 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 UFL1O94874 794 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 MCM3P25205 808 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 USP8P40818 1118 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 TUBB4BP68371 445 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 TRADDQ15628 312 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 CCDC40Q4G0X9 1142 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 SH3RF1Q7Z6J0 888 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 FERMT2Q96AC1 680 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 FAM212AQ96EL1 285 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 NCAPGQ9BPX3 1015 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 KANSL2Q9H9L4 492 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 NFU1Q9UMS0 254 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 N4BP2Q86UW6 1770 aaPredicted RBP7.72□□□□□ -1.17
NEDD9-216ENST00000620854 WDR19Q8NEZ3 1342 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 KCNQ2O43526 872 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 HSF2BPO75031 334 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 HIBADHP31937 336 aaKnown RBP7.72□□□□□ -1.17
NEDD9-216ENST00000620854 MAP2K2P36507 400 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 IFT88Q13099 833 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 PPFIA1Q13136 1202 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms