RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 TLR7Q9NYK1 1049 aaKnown RBP12.51□□□□□ -0.41
CLIP1-219ENST00000620786 SERPINB13Q9UIV8 391 aa12.51□□□□□ -0.41
CLIP1-219ENST00000620786 ZBTB7AO95365 584 aa12.51□□□□□ -0.41
CLIP1-219ENST00000620786 VIMP08670 466 aaKnown RBP12.51□□□□□ -0.41
CLIP1-219ENST00000620786 MTX1Q13505 466 aa12.51□□□□□ -0.41
CLIP1-219ENST00000620786 C4orf50Q6ZRC1 276 aa12.51□□□□□ -0.41
CLIP1-219ENST00000620786 SLC7A3Q8WY07 619 aa12.51□□□□□ -0.41
CLIP1-219ENST00000620786 MIS12Q9H081 205 aa12.51□□□□□ -0.41
CLIP1-219ENST00000620786 CACYBPQ9HB71 228 aaKnown RBP12.51□□□□□ -0.41
CLIP1-219ENST00000620786 MKRN1Q9UHC7 482 aaKnown RBP12.51□□□□□ -0.41
CLIP1-219ENST00000620786 PNMA3Q9UL41 463 aa12.51□□□□□ -0.41
CLIP1-219ENST00000620786 KIF1BO60333 1816 aa12.51□□□□□ -0.41
CLIP1-219ENST00000620786 LGSNQ5TDP6 509 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 IFT20Q8IY31 132 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 IQCDQ96DY2 449 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 COA1Q9GZY4 146 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 DISC1Q9NRI5 854 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 ARMCX3Q9UH62 379 aaPredicted RBP12.5□□□□□ -0.41
CLIP1-219ENST00000620786 KIAA1024Q9UPX6 916 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.5□□□□□ -0.41
CLIP1-219ENST00000620786 INO80B-WBP1J3KQ70 363 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 HPDP32754 393 aaPredicted RBP12.5□□□□□ -0.41
CLIP1-219ENST00000620786 ARPP19P56211 112 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 PDZD4Q76G19 769 aaPredicted RBP12.5□□□□□ -0.41
CLIP1-219ENST00000620786 FAM76AQ8TAV0 307 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 PRPF31Q8WWY3 499 aaKnown RBP12.5□□□□□ -0.41
CLIP1-219ENST00000620786 SLF1Q9BQI6 1058 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 INO80BQ9C086 356 aaPredicted RBP12.5□□□□□ -0.41
CLIP1-219ENST00000620786 SLC39A2Q9NP94 309 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 PCDHA4Q9UN74 947 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 LONRF2Q1L5Z9 754 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 ODR4Q5SWX8 454 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 SUSD4Q5VX71 490 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 KIF9Q9HAQ2 790 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 NOC2LQ9Y3T9 749 aaKnown RBP12.5□□□□□ -0.41
CLIP1-219ENST00000620786 HNRNPDLO14979 420 aaKnown RBP12.5□□□□□ -0.41
CLIP1-219ENST00000620786 GADD45BO75293 160 aaPredicted RBP12.5□□□□□ -0.41
CLIP1-219ENST00000620786 MYL3P08590 195 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 KIAA1841Q6NSI8 718 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 HDXQ7Z353 690 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 PPM1KQ8N3J5 372 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 PGBD1Q96JS3 809 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 CCDC94Q9BW85 323 aaPredicted RBP12.5□□□□□ -0.41
CLIP1-219ENST00000620786 TSKSQ9UJT2 592 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 SSH2Q76I76 1423 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 SHROOM2Q13796 1616 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 CIB2O75838 187 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 TBC1D8O95759 1140 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 ZNF75DP51815 510 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 NBPF11Q86T75 865 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 NME8Q8N427 588 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 SLC17A8Q8NDX2 589 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 PPP1R16BQ96T49 567 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 IFIH1Q9BYX4 1025 aaKnown RBP12.5□□□□□ -0.41
CLIP1-219ENST00000620786 VPS37BQ9H9H4 285 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 AMFRQ9UKV5 643 aa12.5□□□□□ -0.41
CLIP1-219ENST00000620786 TYW5A2RUC4 315 aaKnown RBP12.49□□□□□ -0.41
CLIP1-219ENST00000620786 TUBBP07437 444 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 PTPREP23469 700 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 EVCP57679 992 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 EXOC8Q8IYI6 725 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 LCORLQ8N3X6 602 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 PIGSQ96S52 555 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 DBNLQ9UJU6 430 aaKnown RBP12.49□□□□□ -0.41
CLIP1-219ENST00000620786 LONP1P36776 959 aaKnown RBP12.49□□□□□ -0.41
CLIP1-219ENST00000620786 ADAM9Q13443 819 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 PLCB4Q15147 1175 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 TBC1D10BQ4KMP7 808 aaPredicted RBP12.49□□□□□ -0.41
CLIP1-219ENST00000620786 SNX25Q9H3E2 840 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 RPS6KA4O75676 772 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 ZMYM1Q5SVZ6 1142 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 ADALQ6DHV7 355 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 PI4K2BQ8TCG2 481 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 KMT5AQ9NQR1 393 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.49□□□□□ -0.41
CLIP1-219ENST00000620786 CLASP1Q7Z460 1538 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 RPN1P04843 607 aaKnown RBP12.49□□□□□ -0.41
CLIP1-219ENST00000620786 ADD2P35612 726 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 MYL7Q01449 175 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 TUBB2AQ13885 445 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 SYMPKQ92797 1274 aaKnown RBP12.49□□□□□ -0.41
CLIP1-219ENST00000620786 TUBB2BQ9BVA1 445 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 TPCN1Q9ULQ1 816 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 USP17L8P0C7I0 530 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 CAPN2P17655 700 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 SARNPP82979 210 aaKnown RBP12.49□□□□□ -0.41
CLIP1-219ENST00000620786 ZNF341Q9BYN7 854 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 IMPACTQ9P2X3 320 aa12.49□□□□□ -0.41
CLIP1-219ENST00000620786 RNF123Q5XPI4 1314 aa12.48□□□□□ -0.41
CLIP1-219ENST00000620786 TTC37Q6PGP7 1564 aa12.48□□□□□ -0.41
CLIP1-219ENST00000620786 BTBD18B2RXH4 712 aa12.48□□□□□ -0.41
CLIP1-219ENST00000620786 GSPT1P15170 499 aaKnown RBP12.48□□□□□ -0.41
CLIP1-219ENST00000620786 MECOMQ03112 1051 aa12.48□□□□□ -0.41
CLIP1-219ENST00000620786 DYNLL2Q96FJ2 89 aa12.48□□□□□ -0.41
CLIP1-219ENST00000620786 CDHR1Q96JP9 859 aa12.48□□□□□ -0.41
CLIP1-219ENST00000620786 BSDC1Q9NW68 430 aaPredicted RBP12.48□□□□□ -0.41
CLIP1-219ENST00000620786 CHD1O14646 1710 aa12.48□□□□□ -0.41
CLIP1-219ENST00000620786 CCDC160A6NGH7 325 aa12.48□□□□□ -0.41
CLIP1-219ENST00000620786 PRKAB2O43741 272 aa12.48□□□□□ -0.41
CLIP1-219ENST00000620786 PTGDRQ13258 359 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms