RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 ZKSCAN2Q63HK3 967 aa6.52□□□□□ -1.37
CBWD3-215ENST00000619322 ARRDC4Q8NCT1 418 aa6.52□□□□□ -1.37
CBWD3-215ENST00000619322 VTA1Q9NP79 307 aa6.52□□□□□ -1.37
CBWD3-215ENST00000619322 PLXND1Q9Y4D7 1925 aa6.52□□□□□ -1.37
CBWD3-215ENST00000619322 USP17L10C9JJH3 530 aa6.52□□□□□ -1.37
CBWD3-215ENST00000619322 ANXA1P04083 346 aa6.52□□□□□ -1.37
CBWD3-215ENST00000619322 HLA-DOAP06340 250 aa6.52□□□□□ -1.37
CBWD3-215ENST00000619322 SMPD1P17405 629 aa6.52□□□□□ -1.37
CBWD3-215ENST00000619322 HERVK_113P62684 666 aa6.52□□□□□ -1.37
CBWD3-215ENST00000619322 TRAF1Q13077 416 aa6.52□□□□□ -1.37
CBWD3-215ENST00000619322 TMEM39BQ9GZU3 492 aa6.52□□□□□ -1.37
CBWD3-215ENST00000619322 TDRD3Q9H7E2 651 aaKnown RBP6.52□□□□□ -1.37
CBWD3-215ENST00000619322 ELP3Q9H9T3 547 aa6.52□□□□□ -1.37
CBWD3-215ENST00000619322 TMPRSS4Q9NRS4 437 aa6.52□□□□□ -1.37
CBWD3-215ENST00000619322 TOR4AQ9NXH8 423 aa6.52□□□□□ -1.37
CBWD3-215ENST00000619322 STK39Q9UEW8 545 aa6.52□□□□□ -1.37
CBWD3-215ENST00000619322 FEM1BQ9UK73 627 aa6.52□□□□□ -1.37
CBWD3-215ENST00000619322 ADCY3O60266 1144 aa6.51□□□□□ -1.37
CBWD3-215ENST00000619322 GFRA3O60609 400 aa6.51□□□□□ -1.37
CBWD3-215ENST00000619322 PDIA4P13667 645 aaKnown RBP6.51□□□□□ -1.37
CBWD3-215ENST00000619322 C12orf60Q5U649 245 aa6.51□□□□□ -1.37
CBWD3-215ENST00000619322 CCDC146Q8IYE0 955 aa6.51□□□□□ -1.37
CBWD3-215ENST00000619322 DNERQ8NFT8 737 aa6.51□□□□□ -1.37
CBWD3-215ENST00000619322 FRAT1Q92837 279 aaPredicted RBP6.51□□□□□ -1.37
CBWD3-215ENST00000619322 TSR2Q969E8 191 aaKnown RBP6.51□□□□□ -1.37
CBWD3-215ENST00000619322 KIF1BPQ96EK5 621 aa6.51□□□□□ -1.37
CBWD3-215ENST00000619322 TTC14Q96N46 770 aa6.51□□□□□ -1.37
CBWD3-215ENST00000619322 VCPKMTQ9H867 229 aa6.51□□□□□ -1.37
CBWD3-215ENST00000619322 ZNF287Q9HBT7 754 aa6.51□□□□□ -1.37
CBWD3-215ENST00000619322 USP40Q9NVE5 1235 aa6.51□□□□□ -1.37
CBWD3-215ENST00000619322 PPME1Q9Y570 386 aa6.51□□□□□ -1.37
CBWD3-215ENST00000619322 NUP210Q8TEM1 1887 aaPredicted RBP6.51□□□□□ -1.37
CBWD3-215ENST00000619322 CTAGE5O15320 804 aa6.51□□□□□ -1.37
CBWD3-215ENST00000619322 ZNF865P0CJ78 1059 aaPredicted RBP6.51□□□□□ -1.37
CBWD3-215ENST00000619322 GRIK5Q16478 980 aa6.51□□□□□ -1.37
CBWD3-215ENST00000619322 MFSD14CQ5VZR4 134 aa6.51□□□□□ -1.37
CBWD3-215ENST00000619322 UCN2Q96RP3 112 aa6.51□□□□□ -1.37
CBWD3-215ENST00000619322 PUS3Q9BZE2 481 aaKnown RBP6.51□□□□□ -1.37
CBWD3-215ENST00000619322 RANBP17Q9H2T7 1088 aaKnown RBP6.51□□□□□ -1.37
CBWD3-215ENST00000619322 ZFAND3Q9H8U3 227 aa6.51□□□□□ -1.37
CBWD3-215ENST00000619322 DDX19BQ9UMR2 479 aa6.51□□□□□ -1.37
CBWD3-215ENST00000619322 V9GY48 417 aaPredicted RBP6.51□□□□□ -1.37
CBWD3-215ENST00000619322 C5orf67F2Z3F1 127 aa6.51□□□□□ -1.37
CBWD3-215ENST00000619322 DUSP11O75319 330 aaKnown RBP6.51□□□□□ -1.37
CBWD3-215ENST00000619322 TRIM27P14373 513 aa6.51□□□□□ -1.37
CBWD3-215ENST00000619322 GPR142Q7Z601 462 aa6.51□□□□□ -1.37
CBWD3-215ENST00000619322 KIAA0825Q8IV33 1275 aa6.51□□□□□ -1.37
CBWD3-215ENST00000619322 FGD4Q96M96 766 aa6.51□□□□□ -1.37
CBWD3-215ENST00000619322 ARHGAP9Q9BRR9 750 aa6.51□□□□□ -1.37
CBWD3-215ENST00000619322 CXXC1Q9P0U4 656 aaPredicted RBP6.51□□□□□ -1.37
CBWD3-215ENST00000619322 MYH15Q9Y2K3 1946 aa6.5□□□□□ -1.37
CBWD3-215ENST00000619322 PSMC4P43686 418 aa6.5□□□□□ -1.37
CBWD3-215ENST00000619322 GYG1P46976 350 aa6.5□□□□□ -1.37
CBWD3-215ENST00000619322 C20orf194Q5TEA3 1177 aa6.5□□□□□ -1.37
CBWD3-215ENST00000619322 PSRC1Q6PGN9 363 aaPredicted RBP6.5□□□□□ -1.37
CBWD3-215ENST00000619322 FAM174AQ8TBP5 190 aa6.5□□□□□ -1.37
CBWD3-215ENST00000619322 ITPKCQ96DU7 683 aa6.5□□□□□ -1.37
CBWD3-215ENST00000619322 MTMR10Q9NXD2 777 aa6.5□□□□□ -1.37
CBWD3-215ENST00000619322 DDTLA6NHG4 134 aaPredicted RBP6.5□□□□□ -1.37
CBWD3-215ENST00000619322 RAB30Q15771 203 aa6.5□□□□□ -1.37
CBWD3-215ENST00000619322 PRKAG3Q9UGI9 489 aa6.5□□□□□ -1.37
CBWD3-215ENST00000619322 PPP1R9AQ9ULJ8 1098 aa6.5□□□□□ -1.37
CBWD3-215ENST00000619322 NDUFB9Q9Y6M9 179 aa6.5□□□□□ -1.37
CBWD3-215ENST00000619322 NCK2O43639 380 aa6.5□□□□□ -1.37
CBWD3-215ENST00000619322 CD2BP2O95400 341 aaKnown RBP6.5□□□□□ -1.37
CBWD3-215ENST00000619322 CYP2E1P05181 493 aaPredicted RBP6.5□□□□□ -1.37
CBWD3-215ENST00000619322 ZKSCAN1P17029 563 aaPredicted RBP6.5□□□□□ -1.37
CBWD3-215ENST00000619322 PHKA1P46020 1223 aa6.5□□□□□ -1.37
CBWD3-215ENST00000619322 MCTP2Q6DN12 878 aa6.5□□□□□ -1.37
CBWD3-215ENST00000619322 NFRKBQ6P4R8 1299 aa6.5□□□□□ -1.37
CBWD3-215ENST00000619322 KCNV1Q6PIU1 500 aa6.5□□□□□ -1.37
CBWD3-215ENST00000619322 BANK1Q8NDB2 785 aa6.5□□□□□ -1.37
CBWD3-215ENST00000619322 SIL1Q9H173 461 aa6.5□□□□□ -1.37
CBWD3-215ENST00000619322 TMOD4Q9NZQ9 345 aa6.5□□□□□ -1.37
CBWD3-215ENST00000619322 GNEQ9Y223 722 aaKnown RBP6.5□□□□□ -1.37
CBWD3-215ENST00000619322 PCDHA11Q9Y5I1 949 aa6.5□□□□□ -1.37
CBWD3-215ENST00000619322 VGLL3A8MV65 326 aa6.49□□□□□ -1.37
CBWD3-215ENST00000619322 WNT7AO00755 349 aa6.49□□□□□ -1.37
CBWD3-215ENST00000619322 PRKCZQ05513 592 aa6.49□□□□□ -1.37
CBWD3-215ENST00000619322 BMP8AQ7Z5Y6 402 aa6.49□□□□□ -1.37
CBWD3-215ENST00000619322 SIAH1Q8IUQ4 282 aa6.49□□□□□ -1.37
CBWD3-215ENST00000619322 DEPDC4Q8N2C3 294 aa6.49□□□□□ -1.37
CBWD3-215ENST00000619322 TRIB2Q92519 343 aa6.49□□□□□ -1.37
CBWD3-215ENST00000619322 DCTPP1Q9H773 170 aa6.49□□□□□ -1.37
CBWD3-215ENST00000619322 KANSL2Q9H9L4 492 aa6.49□□□□□ -1.37
CBWD3-215ENST00000619322 FAM187AA6NFU0 413 aa6.49□□□□□ -1.37
CBWD3-215ENST00000619322 HAS3O00219 553 aa6.49□□□□□ -1.37
CBWD3-215ENST00000619322 TCERG1O14776 1098 aaKnown RBP6.49□□□□□ -1.37
CBWD3-215ENST00000619322 HMMRO75330 724 aa6.49□□□□□ -1.37
CBWD3-215ENST00000619322 ICAM3P32942 547 aa6.49□□□□□ -1.37
CBWD3-215ENST00000619322 CCDC158Q5M9N0 1113 aa6.49□□□□□ -1.37
CBWD3-215ENST00000619322 SLC39A5Q6ZMH5 540 aa6.49□□□□□ -1.37
CBWD3-215ENST00000619322 FAM133AQ8N9E0 248 aa6.49□□□□□ -1.37
CBWD3-215ENST00000619322 NEDD1Q8NHV4 660 aa6.49□□□□□ -1.37
CBWD3-215ENST00000619322 PRRX2Q99811 253 aa6.49□□□□□ -1.37
CBWD3-215ENST00000619322 CCDC8Q9H0W5 538 aaPredicted RBP6.49□□□□□ -1.37
CBWD3-215ENST00000619322 SLC38A10Q9HBR0 1119 aa6.49□□□□□ -1.37
CBWD3-215ENST00000619322 HELLSQ9NRZ9 838 aa6.49□□□□□ -1.37
CBWD3-215ENST00000619322 hCG_1984214I3L0E3 225 aa6.48□□□□□ -1.37
CBWD3-215ENST00000619322 CBLBQ13191 982 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms