RNA–Protein interactions for RNA: ENST00000618970.4

PDCD6-213, Transcript of programmed cell death 6, humanhuman

TSL 3 BASIC

Gene PDCD6, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-213ENST00000618970 CALM3P0DP25 149 aa15.6■□□□□ 0.09
PDCD6-213ENST00000618970 CACNB2Q08289 660 aaPredicted RBP15.6■□□□□ 0.09
PDCD6-213ENST00000618970 FUT2Q10981 343 aa15.6■□□□□ 0.09
PDCD6-213ENST00000618970 SYDE2Q5VT97 1194 aa15.6■□□□□ 0.09
PDCD6-213ENST00000618970 PLEKHH3Q7Z736 793 aa15.6■□□□□ 0.09
PDCD6-213ENST00000618970 MICU3Q86XE3 530 aa15.6■□□□□ 0.09
PDCD6-213ENST00000618970 CCDC144CPQ8IYA2 1237 aa15.6■□□□□ 0.09
PDCD6-213ENST00000618970 GTF3C2Q8WUA4 911 aaPredicted RBP15.6■□□□□ 0.09
PDCD6-213ENST00000618970 KIFC2Q96AC6 838 aa15.6■□□□□ 0.09
PDCD6-213ENST00000618970 JMJD4Q9H9V9 463 aa15.6■□□□□ 0.09
PDCD6-213ENST00000618970 SLC38A10Q9HBR0 1119 aa15.6■□□□□ 0.09
PDCD6-213ENST00000618970 ZNF536O15090 1300 aa15.6■□□□□ 0.09
PDCD6-213ENST00000618970 SOX1O00570 391 aaPredicted RBP15.59■□□□□ 0.09
PDCD6-213ENST00000618970 SMARCA1P28370 1054 aa15.59■□□□□ 0.09
PDCD6-213ENST00000618970 CCND3P30281 292 aaPredicted RBP15.59■□□□□ 0.09
PDCD6-213ENST00000618970 ADD1P35611 737 aaKnown RBP15.59■□□□□ 0.09
PDCD6-213ENST00000618970 RGS2P41220 211 aa15.59■□□□□ 0.09
PDCD6-213ENST00000618970 SNAP25P60880 206 aa15.59■□□□□ 0.09
PDCD6-213ENST00000618970 FGD1P98174 961 aa15.59■□□□□ 0.09
PDCD6-213ENST00000618970 TMEM132BQ14DG7 1078 aa15.59■□□□□ 0.09
PDCD6-213ENST00000618970 NTRK3Q16288 839 aa15.59■□□□□ 0.09
PDCD6-213ENST00000618970 ME3Q16798 604 aa15.59■□□□□ 0.09
PDCD6-213ENST00000618970 ADGRF4Q8IZF3 695 aa15.59■□□□□ 0.09
PDCD6-213ENST00000618970 CMTR1Q8N1G2 835 aaKnown RBP15.59■□□□□ 0.09
PDCD6-213ENST00000618970 SRBD1Q8N5C6 995 aaKnown RBP15.59■□□□□ 0.09
PDCD6-213ENST00000618970 APBA2Q99767 749 aa15.59■□□□□ 0.09
PDCD6-213ENST00000618970 RANBP17Q9H2T7 1088 aaKnown RBP15.59■□□□□ 0.09
PDCD6-213ENST00000618970 C11orf49Q9H6J7 331 aa15.59■□□□□ 0.09
PDCD6-213ENST00000618970 ZNF214Q9UL59 606 aaPredicted RBP15.59■□□□□ 0.09
PDCD6-213ENST00000618970 ZMYND8Q9ULU4 1186 aaPredicted RBP15.59■□□□□ 0.09
PDCD6-213ENST00000618970 RABGAP1Q9Y3P9 1069 aa15.59■□□□□ 0.09
PDCD6-213ENST00000618970 PFASO15067 1338 aa15.59■□□□□ 0.09
PDCD6-213ENST00000618970 ST3GAL1Q11201 340 aa15.58■□□□□ 0.08
PDCD6-213ENST00000618970 TMTC3Q6ZXV5 915 aa15.58■□□□□ 0.08
PDCD6-213ENST00000618970 CCAR1Q8IX12 1150 aaKnown RBP15.58■□□□□ 0.08
PDCD6-213ENST00000618970 CTCFLQ8NI51 663 aaPredicted RBP15.58■□□□□ 0.08
PDCD6-213ENST00000618970 A0A1W2PPC1 479 aa15.57■□□□□ 0.08
PDCD6-213ENST00000618970 GOLGA8AA7E2F4 631 aa15.57■□□□□ 0.08
PDCD6-213ENST00000618970 GOLGA8BA8MQT2 603 aa15.57■□□□□ 0.08
PDCD6-213ENST00000618970 ATP2A1O14983 1001 aa15.57■□□□□ 0.08
PDCD6-213ENST00000618970 PFKFB2O60825 505 aa15.57■□□□□ 0.08
PDCD6-213ENST00000618970 FDX1P10109 184 aa15.57■□□□□ 0.08
PDCD6-213ENST00000618970 SYN1P17600 705 aa15.57■□□□□ 0.08
PDCD6-213ENST00000618970 CCT2P78371 535 aaKnown RBP15.57■□□□□ 0.08
PDCD6-213ENST00000618970 SCRN1Q12765 414 aa15.57■□□□□ 0.08
PDCD6-213ENST00000618970 ANKRD1Q15327 319 aa15.57■□□□□ 0.08
PDCD6-213ENST00000618970 RTN1Q16799 776 aa15.57■□□□□ 0.08
PDCD6-213ENST00000618970 LHX8Q68G74 356 aa15.57■□□□□ 0.08
PDCD6-213ENST00000618970 SAMD1Q6SPF0 538 aaPredicted RBP15.57■□□□□ 0.08
PDCD6-213ENST00000618970 SYNE3Q6ZMZ3 975 aa15.57■□□□□ 0.08
PDCD6-213ENST00000618970 TRMT44Q8IYL2 757 aaKnown RBP15.57■□□□□ 0.08
PDCD6-213ENST00000618970 MB21D1Q8N884 522 aa15.57■□□□□ 0.08
PDCD6-213ENST00000618970 LRCH3Q96II8 777 aa15.57■□□□□ 0.08
PDCD6-213ENST00000618970 GDF15Q99988 308 aa15.57■□□□□ 0.08
PDCD6-213ENST00000618970 SPZ1Q9BXG8 430 aa15.57■□□□□ 0.08
PDCD6-213ENST00000618970 FLRT1Q9NZU1 646 aa15.57■□□□□ 0.08
PDCD6-213ENST00000618970 RIPK3Q9Y572 518 aa15.57■□□□□ 0.08
PDCD6-213ENST00000618970 LAMA2P24043 3122 aaKnown RBP15.57■□□□□ 0.08
PDCD6-213ENST00000618970 TAL1P17542 331 aaPredicted RBP15.56■□□□□ 0.08
PDCD6-213ENST00000618970 KIF5BP33176 963 aa15.56■□□□□ 0.08
PDCD6-213ENST00000618970 METAP2P50579 478 aaKnown RBP eCLIP15.56■□□□□ 0.08
PDCD6-213ENST00000618970 MAP2K5Q13163 448 aa15.56■□□□□ 0.08
PDCD6-213ENST00000618970 WDR78Q5VTH9 848 aa15.56■□□□□ 0.08
PDCD6-213ENST00000618970 NOL8Q76FK4 1167 aaKnown RBP15.56■□□□□ 0.08
PDCD6-213ENST00000618970 IL27Q8NEV9 243 aa15.56■□□□□ 0.08
PDCD6-213ENST00000618970 PIGSQ96S52 555 aa15.56■□□□□ 0.08
PDCD6-213ENST00000618970 LZTS2Q9BRK4 669 aa15.56■□□□□ 0.08
PDCD6-213ENST00000618970 MOV10L1Q9BXT6 1211 aaKnown RBP15.56■□□□□ 0.08
PDCD6-213ENST00000618970 SPATC1LQ9H0A9 340 aa15.56■□□□□ 0.08
PDCD6-213ENST00000618970 NCOA5Q9HCD5 579 aaKnown RBP15.56■□□□□ 0.08
PDCD6-213ENST00000618970 CWC22Q9HCG8 908 aaKnown RBP15.56■□□□□ 0.08
PDCD6-213ENST00000618970 RAVER2Q9HCJ3 691 aaKnown RBP15.56■□□□□ 0.08
PDCD6-213ENST00000618970 VAT1LQ9HCJ6 419 aa15.56■□□□□ 0.08
PDCD6-213ENST00000618970 RBM28Q9NW13 759 aaKnown RBP15.56■□□□□ 0.08
PDCD6-213ENST00000618970 ISY1Q9ULR0 285 aaKnown RBP15.56■□□□□ 0.08
PDCD6-213ENST00000618970 CNTNAP5Q8WYK1 1306 aa15.56■□□□□ 0.08
PDCD6-213ENST00000618970 LCTP09848 1927 aa15.56■□□□□ 0.08
PDCD6-213ENST00000618970 PPP1R11O60927 126 aaPredicted RBP15.55■□□□□ 0.08
PDCD6-213ENST00000618970 ZBED4O75132 1171 aa15.55■□□□□ 0.08
PDCD6-213ENST00000618970 CTDNEP1O95476 244 aa15.55■□□□□ 0.08
PDCD6-213ENST00000618970 COL6A1P12109 1028 aa15.55■□□□□ 0.08
PDCD6-213ENST00000618970 GNAQP50148 359 aa15.55■□□□□ 0.08
PDCD6-213ENST00000618970 OAZ1P54368 228 aa15.55■□□□□ 0.08
PDCD6-213ENST00000618970 CCNA1P78396 465 aa15.55■□□□□ 0.08
PDCD6-213ENST00000618970 IKQ13123 557 aaPredicted RBP15.55■□□□□ 0.08
PDCD6-213ENST00000618970 STK3Q13188 491 aa15.55■□□□□ 0.08
PDCD6-213ENST00000618970 PPP2R5BQ15173 497 aa15.55■□□□□ 0.08
PDCD6-213ENST00000618970 QRICH1Q2TAL8 776 aa15.55■□□□□ 0.08
PDCD6-213ENST00000618970 RIOX2Q8IUF8 465 aa15.55■□□□□ 0.08
PDCD6-213ENST00000618970 AGBL1Q96MI9 1066 aa15.55■□□□□ 0.08
PDCD6-213ENST00000618970 NAP1L2Q9ULW6 460 aaPredicted RBP15.55■□□□□ 0.08
PDCD6-213ENST00000618970 LIMCH1Q9UPQ0 1083 aa15.55■□□□□ 0.08
PDCD6-213ENST00000618970 ZNF236Q9UL36 1845 aa15.54■□□□□ 0.08
PDCD6-213ENST00000618970 SLC15A5A6NIM6 579 aa15.54■□□□□ 0.08
PDCD6-213ENST00000618970 PTPREP23469 700 aa15.54■□□□□ 0.08
PDCD6-213ENST00000618970 STAT3P40763 770 aa15.54■□□□□ 0.08
PDCD6-213ENST00000618970 CDC37Q16543 378 aaPredicted RBP15.54■□□□□ 0.08
PDCD6-213ENST00000618970 CCDC174Q6PII3 467 aa15.54■□□□□ 0.08
PDCD6-213ENST00000618970 CPXCR1Q8N123 301 aa15.54■□□□□ 0.08
PDCD6-213ENST00000618970 CCDC82Q8N4S0 544 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms