RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 PARD6BQ9BYG5 372 aa12.58□□□□□ -0.4
TP53-223ENST00000618944 MAGEC2Q9UBF1 373 aaPredicted RBP12.58□□□□□ -0.4
TP53-223ENST00000618944 TFR2Q9UP52 801 aa12.58□□□□□ -0.4
TP53-223ENST00000618944 LAD1O00515 517 aa12.57□□□□□ -0.4
TP53-223ENST00000618944 SLURP2P0DP57 97 aa12.57□□□□□ -0.4
TP53-223ENST00000618944 KLK7P49862 253 aa12.57□□□□□ -0.4
TP53-223ENST00000618944 ANKRD40Q6AI12 368 aa12.57□□□□□ -0.4
TP53-223ENST00000618944 ZBTB9Q96C00 473 aa12.57□□□□□ -0.4
TP53-223ENST00000618944 TRIM10Q9UDY6 481 aa12.57□□□□□ -0.4
TP53-223ENST00000618944 EP400Q96L91 3159 aa12.57□□□□□ -0.4
TP53-223ENST00000618944 BBOX1O75936 387 aa12.57□□□□□ -0.4
TP53-223ENST00000618944 ZRANB2O95218 330 aaKnown RBP eCLIP12.57□□□□□ -0.4
TP53-223ENST00000618944 PLCG2P16885 1265 aa12.57□□□□□ -0.4
TP53-223ENST00000618944 PRPHP41219 470 aa12.57□□□□□ -0.4
TP53-223ENST00000618944 PLA2G4AP47712 749 aa12.57□□□□□ -0.4
TP53-223ENST00000618944 NT5C2P49902 561 aa12.57□□□□□ -0.4
TP53-223ENST00000618944 TTI2Q6NXR4 508 aa12.57□□□□□ -0.4
TP53-223ENST00000618944 DPP8Q6V1X1 898 aaPredicted RBP12.57□□□□□ -0.4
TP53-223ENST00000618944 GPR161Q8N6U8 529 aaKnown RBP12.57□□□□□ -0.4
TP53-223ENST00000618944 GOLGA1Q92805 767 aa12.57□□□□□ -0.4
TP53-223ENST00000618944 GJD4Q96KN9 370 aaPredicted RBP12.57□□□□□ -0.4
TP53-223ENST00000618944 UIMC1Q96RL1 719 aa12.57□□□□□ -0.4
TP53-223ENST00000618944 DUSP9Q99956 384 aaKnown RBP12.57□□□□□ -0.4
TP53-223ENST00000618944 TRIM9Q9C026 710 aa12.57□□□□□ -0.4
TP53-223ENST00000618944 EXOC1Q9NV70 894 aa12.57□□□□□ -0.4
TP53-223ENST00000618944 TTF2Q9UNY4 1162 aaKnown RBP12.57□□□□□ -0.4
TP53-223ENST00000618944 SNED1Q8TER0 1413 aa12.57□□□□□ -0.4
TP53-223ENST00000618944 LAMB1P07942 1786 aa12.57□□□□□ -0.4
TP53-223ENST00000618944 BTAF1O14981 1849 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 CTAGE9A4FU28 777 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 LGALS16A8MUM7 142 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 ZBTB22O15209 634 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 NKRFO15226 690 aaKnown RBP eCLIP12.56□□□□□ -0.4
TP53-223ENST00000618944 PDHBP11177 359 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 AKR1B1P15121 316 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 ATP2B2Q01814 1243 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 REXO1Q8N1G1 1221 aaKnown RBP12.56□□□□□ -0.4
TP53-223ENST00000618944 CERKQ8TCT0 537 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 PCMTD1Q96MG8 357 aaPredicted RBP12.56□□□□□ -0.4
TP53-223ENST00000618944 TUBGCP2Q9BSJ2 902 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 MMTAG2Q9BU76 263 aaKnown RBP12.56□□□□□ -0.4
TP53-223ENST00000618944 GUCA1BQ9UMX6 200 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 LUC7L2Q9Y383 392 aaKnown RBP12.56□□□□□ -0.4
TP53-223ENST00000618944 DAGLAQ9Y4D2 1042 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 CCDC88AQ3V6T2 1871 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 ZNF831Q5JPB2 1677 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 FECHP22830 423 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 ARHGAP25P42331 645 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 CHMP4BP1P59074 171 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 MEX3CQ5U5Q3 659 aaKnown RBP12.56□□□□□ -0.4
TP53-223ENST00000618944 SLF2Q8IX21 1173 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 OR8K1Q8NGG5 319 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 ZNF507Q8TCN5 953 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 FAM163AQ96GL9 167 aaPredicted RBP12.56□□□□□ -0.4
TP53-223ENST00000618944 AK8Q96MA6 479 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 THAP9Q9H5L6 903 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 SLC39A2Q9NP94 309 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 MTMR4Q9NYA4 1195 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 PODXL2Q9NZ53 605 aa12.56□□□□□ -0.4
TP53-223ENST00000618944 EPN1Q9Y6I3 576 aaPredicted RBP12.56□□□□□ -0.4
TP53-223ENST00000618944 COL24A1Q17RW2 1714 aa12.55□□□□□ -0.4
TP53-223ENST00000618944 TDP2O95551 362 aa12.55□□□□□ -0.4
TP53-223ENST00000618944 EEF1GP26641 437 aaKnown RBP12.55□□□□□ -0.4
TP53-223ENST00000618944 SCNN1DP51172 638 aa12.55□□□□□ -0.4
TP53-223ENST00000618944 GABPB1Q06547 395 aaPredicted RBP12.55□□□□□ -0.4
TP53-223ENST00000618944 DDR1Q08345 913 aa12.55□□□□□ -0.4
TP53-223ENST00000618944 TRIM14Q14142 442 aa12.55□□□□□ -0.4
TP53-223ENST00000618944 TERF2Q15554 542 aa12.55□□□□□ -0.4
TP53-223ENST00000618944 DYMQ7RTS9 669 aa12.55□□□□□ -0.4
TP53-223ENST00000618944 SEPT12Q8IYM1 358 aa12.55□□□□□ -0.4
TP53-223ENST00000618944 P2RX5Q93086 422 aa12.55□□□□□ -0.4
TP53-223ENST00000618944 GJA10Q969M2 543 aa12.55□□□□□ -0.4
TP53-223ENST00000618944 DDX4Q9NQI0 724 aaKnown RBP12.55□□□□□ -0.4
TP53-223ENST00000618944 AGPAT5Q9NUQ2 364 aa12.55□□□□□ -0.4
TP53-223ENST00000618944 CDC23Q9UJX2 597 aa12.55□□□□□ -0.4
TP53-223ENST00000618944 REXO2Q9Y3B8 237 aaKnown RBP12.55□□□□□ -0.4
TP53-223ENST00000618944 POLR3GO15318 223 aaPredicted RBP12.54□□□□□ -0.4
TP53-223ENST00000618944 SLC37A4O43826 429 aa12.54□□□□□ -0.4
TP53-223ENST00000618944 SASH3O75995 380 aa12.54□□□□□ -0.4
TP53-223ENST00000618944 NDUFA10O95299 355 aa12.54□□□□□ -0.4
TP53-223ENST00000618944 MYL1P05976 194 aa12.54□□□□□ -0.4
TP53-223ENST00000618944 SLC16A2P36021 539 aa12.54□□□□□ -0.4
TP53-223ENST00000618944 MTIF2P46199 727 aaKnown RBP12.54□□□□□ -0.4
TP53-223ENST00000618944 TBC1D8BQ0IIM8 1120 aa12.54□□□□□ -0.4
TP53-223ENST00000618944 MCM6Q14566 821 aa12.54□□□□□ -0.4
TP53-223ENST00000618944 CALCRLQ16602 461 aa12.54□□□□□ -0.4
TP53-223ENST00000618944 DOK7Q18PE1 504 aa12.54□□□□□ -0.4
TP53-223ENST00000618944 TSR1Q2NL82 804 aaKnown RBP12.54□□□□□ -0.4
TP53-223ENST00000618944 TTBK2Q6IQ55 1244 aa12.54□□□□□ -0.4
TP53-223ENST00000618944 CC2D1AQ6P1N0 951 aaPredicted RBP12.54□□□□□ -0.4
TP53-223ENST00000618944 SRGAP1Q7Z6B7 1085 aa12.54□□□□□ -0.4
TP53-223ENST00000618944 CERS3Q8IU89 383 aa12.54□□□□□ -0.4
TP53-223ENST00000618944 TBC1D22AQ8WUA7 517 aa12.54□□□□□ -0.4
TP53-223ENST00000618944 RABGGTAQ92696 567 aa12.54□□□□□ -0.4
TP53-223ENST00000618944 CALML4Q96GE6 196 aa12.54□□□□□ -0.4
TP53-223ENST00000618944 DHTKD1Q96HY7 919 aaPredicted RBP12.54□□□□□ -0.4
TP53-223ENST00000618944 C7orf25Q9BPX7 421 aa12.54□□□□□ -0.4
TP53-223ENST00000618944 LRWD1Q9UFC0 647 aa12.54□□□□□ -0.4
TP53-223ENST00000618944 GOLGB1Q14789 3259 aaKnown RBP12.54□□□□□ -0.4
TP53-223ENST00000618944 RAD21O60216 631 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms