RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 ERICH2A1L162 156 aa9.63□□□□□ -0.87
NEK3-209ENST00000618856 KLRF2D3W0D1 207 aa9.63□□□□□ -0.87
NEK3-209ENST00000618856 IKQ13123 557 aaPredicted RBP9.63□□□□□ -0.87
NEK3-209ENST00000618856 PWP2Q15269 919 aaKnown RBP9.63□□□□□ -0.87
NEK3-209ENST00000618856 MUM1L1Q5H9M0 696 aa9.63□□□□□ -0.87
NEK3-209ENST00000618856 MFSD14CQ5VZR4 134 aa9.63□□□□□ -0.87
NEK3-209ENST00000618856 CCDC174Q6PII3 467 aa9.63□□□□□ -0.87
NEK3-209ENST00000618856 CATIPQ7Z7H3 387 aa9.63□□□□□ -0.87
NEK3-209ENST00000618856 ZNF654Q8IZM8 581 aa9.63□□□□□ -0.87
NEK3-209ENST00000618856 MORC4Q8TE76 937 aa9.63□□□□□ -0.87
NEK3-209ENST00000618856 U2AF1L4Q8WU68 220 aaKnown RBP9.63□□□□□ -0.87
NEK3-209ENST00000618856 TINF2Q9BSI4 451 aa9.63□□□□□ -0.87
NEK3-209ENST00000618856 KATNBL1Q9H079 304 aa9.63□□□□□ -0.87
NEK3-209ENST00000618856 CWC22Q9HCG8 908 aaKnown RBP9.63□□□□□ -0.87
NEK3-209ENST00000618856 CCPG1Q9ULG6 757 aa9.63□□□□□ -0.87
NEK3-209ENST00000618856 MTMR7Q9Y216 660 aa9.63□□□□□ -0.87
NEK3-209ENST00000618856 SMCHD1A6NHR9 2005 aa9.63□□□□□ -0.87
NEK3-209ENST00000618856 PFASO15067 1338 aa9.62□□□□□ -0.87
NEK3-209ENST00000618856 SOWAHBA6NEL2 793 aa9.62□□□□□ -0.87
NEK3-209ENST00000618856 PPP1R11O60927 126 aaPredicted RBP9.62□□□□□ -0.87
NEK3-209ENST00000618856 SNAI1O95863 264 aaPredicted RBP9.62□□□□□ -0.87
NEK3-209ENST00000618856 ZNF865P0CJ78 1059 aaPredicted RBP9.62□□□□□ -0.87
NEK3-209ENST00000618856 ALAS1P13196 640 aa9.62□□□□□ -0.87
NEK3-209ENST00000618856 CCND3P30281 292 aaPredicted RBP9.62□□□□□ -0.87
NEK3-209ENST00000618856 CYP2C19P33261 490 aa9.62□□□□□ -0.87
NEK3-209ENST00000618856 RCAN1P53805 252 aa9.62□□□□□ -0.87
NEK3-209ENST00000618856 EVCP57679 992 aa9.62□□□□□ -0.87
NEK3-209ENST00000618856 CDC37Q16543 378 aaPredicted RBP9.62□□□□□ -0.87
NEK3-209ENST00000618856 QRICH1Q2TAL8 776 aa9.62□□□□□ -0.87
NEK3-209ENST00000618856 ANKRD35Q8N283 1001 aa9.62□□□□□ -0.87
NEK3-209ENST00000618856 ANKLE1Q8NAG6 615 aa9.62□□□□□ -0.87
NEK3-209ENST00000618856 DEFB118Q96PH6 123 aa9.62□□□□□ -0.87
NEK3-209ENST00000618856 SPZ1Q9BXG8 430 aa9.62□□□□□ -0.87
NEK3-209ENST00000618856 TM6SF1Q9BZW5 370 aa9.62□□□□□ -0.87
NEK3-209ENST00000618856 BIN2Q9UBW5 565 aaPredicted RBP9.62□□□□□ -0.87
NEK3-209ENST00000618856 CTDP1Q9Y5B0 961 aaPredicted RBP9.62□□□□□ -0.87
NEK3-209ENST00000618856 NID2Q14112 1375 aa9.62□□□□□ -0.87
NEK3-209ENST00000618856 ABCB11O95342 1321 aa9.61□□□□□ -0.87
NEK3-209ENST00000618856 NFIBO00712 420 aa9.61□□□□□ -0.87
NEK3-209ENST00000618856 OPLAHO14841 1288 aa9.61□□□□□ -0.87
NEK3-209ENST00000618856 ZBTB5O15062 677 aa9.61□□□□□ -0.87
NEK3-209ENST00000618856 SEPT4O43236 478 aa9.61□□□□□ -0.87
NEK3-209ENST00000618856 CALM1P0DP23 149 aa9.61□□□□□ -0.87
NEK3-209ENST00000618856 CALM2P0DP24 149 aa9.61□□□□□ -0.87
NEK3-209ENST00000618856 CALM3P0DP25 149 aa9.61□□□□□ -0.87
NEK3-209ENST00000618856 TAL1P17542 331 aaPredicted RBP9.61□□□□□ -0.87
NEK3-209ENST00000618856 CNTN2Q02246 1040 aa9.61□□□□□ -0.87
NEK3-209ENST00000618856 MLLT1Q03111 559 aaPredicted RBP9.61□□□□□ -0.87
NEK3-209ENST00000618856 DDX11Q96FC9 970 aa9.61□□□□□ -0.87
NEK3-209ENST00000618856 LZTS2Q9BRK4 669 aa9.61□□□□□ -0.87
NEK3-209ENST00000618856 ZSWIM6Q9HCJ5 1215 aa9.61□□□□□ -0.87
NEK3-209ENST00000618856 BRPF3Q9ULD4 1205 aa9.61□□□□□ -0.87
NEK3-209ENST00000618856 ISY1Q9ULR0 285 aaKnown RBP9.61□□□□□ -0.87
NEK3-209ENST00000618856 FRMPD3Q5JV73 1810 aa9.61□□□□□ -0.87
NEK3-209ENST00000618856 LRRC37A2A6NM11 1700 aa9.6□□□□□ -0.87
NEK3-209ENST00000618856 POTEB2H3BUK9 544 aa9.6□□□□□ -0.87
NEK3-209ENST00000618856 MSCO60682 206 aa9.6□□□□□ -0.87
NEK3-209ENST00000618856 MYCP01106 439 aaPredicted RBP9.6□□□□□ -0.87
NEK3-209ENST00000618856 COL6A1P12109 1028 aa9.6□□□□□ -0.87
NEK3-209ENST00000618856 RPS6KB1P23443 525 aa9.6□□□□□ -0.87
NEK3-209ENST00000618856 EDNRBP24530 442 aa9.6□□□□□ -0.87
NEK3-209ENST00000618856 KIF5BP33176 963 aa9.6□□□□□ -0.87
NEK3-209ENST00000618856 NKX3-2P78367 333 aa9.6□□□□□ -0.87
NEK3-209ENST00000618856 FUT2Q10981 343 aa9.6□□□□□ -0.87
NEK3-209ENST00000618856 BAATQ14032 418 aaPredicted RBP9.6□□□□□ -0.87
NEK3-209ENST00000618856 APOA5Q6Q788 366 aa9.6□□□□□ -0.87
NEK3-209ENST00000618856 SRBD1Q8N5C6 995 aaKnown RBP9.6□□□□□ -0.87
NEK3-209ENST00000618856 SAMD3Q8N6K7 520 aa9.6□□□□□ -0.87
NEK3-209ENST00000618856 FANCBQ8NB91 859 aa9.6□□□□□ -0.87
NEK3-209ENST00000618856 AMNQ9BXJ7 453 aa9.6□□□□□ -0.87
NEK3-209ENST00000618856 LRRC2Q9BYS8 371 aa9.6□□□□□ -0.87
NEK3-209ENST00000618856 HOMER2Q9NSB8 354 aa9.6□□□□□ -0.87
NEK3-209ENST00000618856 FAM217BQ9NTX9 383 aaPredicted RBP9.6□□□□□ -0.87
NEK3-209ENST00000618856 MAP3K20Q9NYL2 800 aaKnown RBP9.6□□□□□ -0.87
NEK3-209ENST00000618856 DDX20Q9UHI6 824 aaKnown RBP9.6□□□□□ -0.87
NEK3-209ENST00000618856 SLC12A7Q9Y666 1083 aa9.6□□□□□ -0.87
NEK3-209ENST00000618856 DNAH12Q6ZR08 3092 aa9.59□□□□□ -0.87
NEK3-209ENST00000618856 PNMA6FA0A0J9YX94 578 aa9.59□□□□□ -0.87
NEK3-209ENST00000618856 CCDC69A6NI79 296 aa9.59□□□□□ -0.87
NEK3-209ENST00000618856 EIF5BO60841 1220 aaKnown RBP9.59□□□□□ -0.87
NEK3-209ENST00000618856 CPA1P15085 419 aa9.59□□□□□ -0.87
NEK3-209ENST00000618856 GNAQP50148 359 aa9.59□□□□□ -0.87
NEK3-209ENST00000618856 HSD17B4P51659 736 aa9.59□□□□□ -0.87
NEK3-209ENST00000618856 ANAPC15P60006 121 aa9.59□□□□□ -0.87
NEK3-209ENST00000618856 RPS6P62753 249 aaKnown RBP9.59□□□□□ -0.87
NEK3-209ENST00000618856 PRAMEF19Q5SWL8 479 aa9.59□□□□□ -0.87
NEK3-209ENST00000618856 BLOC1S2Q6QNY1 142 aa9.59□□□□□ -0.87
NEK3-209ENST00000618856 SLC30A10Q6XR72 485 aa9.59□□□□□ -0.87
NEK3-209ENST00000618856 RNF207Q6ZRF8 634 aa9.59□□□□□ -0.87
NEK3-209ENST00000618856 TMTC3Q6ZXV5 915 aa9.59□□□□□ -0.87
NEK3-209ENST00000618856 RUFY3Q7L099 469 aa9.59□□□□□ -0.87
NEK3-209ENST00000618856 FBXO11Q86XK2 927 aa9.59□□□□□ -0.87
NEK3-209ENST00000618856 CCDC144CPQ8IYA2 1237 aa9.59□□□□□ -0.87
NEK3-209ENST00000618856 CTCFLQ8NI51 663 aaPredicted RBP9.59□□□□□ -0.87
NEK3-209ENST00000618856 JAKMIP1Q96N16 626 aaKnown RBP9.59□□□□□ -0.87
NEK3-209ENST00000618856 PIGSQ96S52 555 aa9.59□□□□□ -0.87
NEK3-209ENST00000618856 MYL10Q9BUA6 226 aa9.59□□□□□ -0.87
NEK3-209ENST00000618856 ALDH8A1Q9H2A2 487 aaPredicted RBP9.59□□□□□ -0.87
NEK3-209ENST00000618856 ABHD16BQ9H3Z7 469 aa9.59□□□□□ -0.87
NEK3-209ENST00000618856 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms