RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 AKR1B15C9JRZ8 316 aaPredicted RBP4.89□□□□□ -1.63
SEC22B-202ENST00000618538 ZSCAN12O43309 604 aa4.89□□□□□ -1.63
SEC22B-202ENST00000618538 GTPBP6O43824 516 aaPredicted RBP4.89□□□□□ -1.63
SEC22B-202ENST00000618538 DHX8Q14562 1220 aaKnown RBP4.89□□□□□ -1.63
SEC22B-202ENST00000618538 PPP2R5BQ15173 497 aa4.89□□□□□ -1.63
SEC22B-202ENST00000618538 SLC10A5Q5PT55 438 aa4.89□□□□□ -1.63
SEC22B-202ENST00000618538 TEX35Q5T0J7 233 aa4.89□□□□□ -1.63
SEC22B-202ENST00000618538 KANK3Q6NY19 840 aa4.89□□□□□ -1.63
SEC22B-202ENST00000618538 CC2D1AQ6P1N0 951 aaPredicted RBP4.89□□□□□ -1.63
SEC22B-202ENST00000618538 UBXN4Q92575 508 aa4.89□□□□□ -1.63
SEC22B-202ENST00000618538 RBM28Q9NW13 759 aaKnown RBP4.89□□□□□ -1.63
SEC22B-202ENST00000618538 TAB2Q9NYJ8 693 aa4.89□□□□□ -1.63
SEC22B-202ENST00000618538 GMPR2Q9P2T1 348 aaKnown RBP4.89□□□□□ -1.63
SEC22B-202ENST00000618538 TRIM10Q9UDY6 481 aa4.89□□□□□ -1.63
SEC22B-202ENST00000618538 LIMA1Q9UHB6 759 aaKnown RBP4.89□□□□□ -1.63
SEC22B-202ENST00000618538 HOOK1Q9UJC3 728 aaKnown RBP4.89□□□□□ -1.63
SEC22B-202ENST00000618538 TFR2Q9UP52 801 aa4.89□□□□□ -1.63
SEC22B-202ENST00000618538 FLT1P17948 1338 aa4.89□□□□□ -1.63
SEC22B-202ENST00000618538 EP400Q96L91 3159 aa4.89□□□□□ -1.63
SEC22B-202ENST00000618538 USP17L3A6NCW0 530 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 USP17L4A6NCW7 530 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 LRRC10BA6NIK2 292 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 CCP110O43303 1012 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 KLRC4O43908 158 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 KIF20AO95235 890 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 TUBB4AP04350 444 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 CASQ1P31415 396 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 PRCPP42785 496 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 AKAP17AQ02040 695 aaKnown RBP4.88□□□□□ -1.63
SEC22B-202ENST00000618538 DIXDC1Q155Q3 683 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 SBK1Q52WX2 424 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 WWC2Q6AWC2 1192 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 CLEC4GQ6UXB4 293 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 USP17L1Q7RTZ2 530 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 IQCA1Q86XH1 822 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 ZBTB9Q96C00 473 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 PNKPQ96T60 521 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 FUT8Q9BYC5 575 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 VPS16Q9H269 839 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 ZSWIM4Q9H7M6 989 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 ANKZF1Q9H8Y5 726 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 ZCCHC17Q9NP64 241 aaKnown RBP4.88□□□□□ -1.63
SEC22B-202ENST00000618538 DACH1Q9UI36 760 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 MAD2L2Q9UI95 211 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 PDS5AQ29RF7 1337 aaKnown RBP4.88□□□□□ -1.63
SEC22B-202ENST00000618538 NAV1Q8NEY1 1877 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 ROBO3Q96MS0 1386 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 RASSF10A6NK89 507 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 H3BQF6 201 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 SEMA3EO15041 775 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 NRDCO43847 1150 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 CCDC175P0C221 793 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 HIBADHP31937 336 aaKnown RBP4.88□□□□□ -1.63
SEC22B-202ENST00000618538 COPB1P53618 953 aaKnown RBP4.88□□□□□ -1.63
SEC22B-202ENST00000618538 NLRP5P59047 1200 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 RPS8P62241 208 aaKnown RBP4.88□□□□□ -1.63
SEC22B-202ENST00000618538 CAVIN4Q5BKX8 364 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 TCP11X2Q5H9J9 407 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 C12orf60Q5U649 245 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 RRAGBQ5VZM2 374 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 ZSCAN1Q8NBB4 408 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 MNS1Q8NEH6 495 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 SH3RF3Q8TEJ3 882 aaPredicted RBP4.88□□□□□ -1.63
SEC22B-202ENST00000618538 CCDC12Q8WUD4 166 aaPredicted RBP4.88□□□□□ -1.63
SEC22B-202ENST00000618538 NELFBQ8WX92 580 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 EEF2KMTQ96G04 330 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 PLIN2Q99541 437 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 CHP1Q99653 195 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 SRRTQ9BXP5 876 aaKnown RBP4.88□□□□□ -1.63
SEC22B-202ENST00000618538 PARD6BQ9BYG5 372 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 ABHD10Q9NUJ1 306 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 GNL3LQ9NVN8 582 aaKnown RBP4.88□□□□□ -1.63
SEC22B-202ENST00000618538 MCM9Q9NXL9 1143 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 RWDD2AQ9UIY3 292 aa4.88□□□□□ -1.63
SEC22B-202ENST00000618538 THRAP3Q9Y2W1 955 aaKnown RBP4.88□□□□□ -1.63
SEC22B-202ENST00000618538 CCDC88AQ3V6T2 1871 aa4.87□□□□□ -1.63
SEC22B-202ENST00000618538 ITIH6Q6UXX5 1313 aa4.87□□□□□ -1.63
SEC22B-202ENST00000618538 CNTNAP4Q9C0A0 1308 aa4.87□□□□□ -1.63
SEC22B-202ENST00000618538 MYH1P12882 1939 aa4.87□□□□□ -1.63
SEC22B-202ENST00000618538 BTAF1O14981 1849 aa4.87□□□□□ -1.63
SEC22B-202ENST00000618538 RCCD1A6NED2 376 aa4.87□□□□□ -1.63
SEC22B-202ENST00000618538 KCNJ18B7U540 433 aa4.87□□□□□ -1.63
SEC22B-202ENST00000618538 STXBP3O00186 592 aa4.87□□□□□ -1.63
SEC22B-202ENST00000618538 EDIL3O43854 480 aa4.87□□□□□ -1.63
SEC22B-202ENST00000618538 RNF40O75150 1001 aa4.87□□□□□ -1.63
SEC22B-202ENST00000618538 ADH1BP00325 375 aa4.87□□□□□ -1.63
SEC22B-202ENST00000618538 RPN1P04843 607 aaKnown RBP4.87□□□□□ -1.63
SEC22B-202ENST00000618538 GOLGA8HP0CJ92 632 aa4.87□□□□□ -1.63
SEC22B-202ENST00000618538 CALM1P0DP23 149 aa4.87□□□□□ -1.63
SEC22B-202ENST00000618538 CALM2P0DP24 149 aa4.87□□□□□ -1.63
SEC22B-202ENST00000618538 CALM3P0DP25 149 aa4.87□□□□□ -1.63
SEC22B-202ENST00000618538 PCP11498 1178 aaKnown RBP4.87□□□□□ -1.63
SEC22B-202ENST00000618538 XBP1P17861 261 aa4.87□□□□□ -1.63
SEC22B-202ENST00000618538 KLK7P49862 253 aa4.87□□□□□ -1.63
SEC22B-202ENST00000618538 GYS2P54840 703 aa4.87□□□□□ -1.63
SEC22B-202ENST00000618538 HERVK_113P62684 666 aa4.87□□□□□ -1.63
SEC22B-202ENST00000618538 ST5P78524 1137 aa4.87□□□□□ -1.63
SEC22B-202ENST00000618538 AMPD2Q01433 879 aa4.87□□□□□ -1.63
SEC22B-202ENST00000618538 TFAP4Q01664 338 aa4.87□□□□□ -1.63
SEC22B-202ENST00000618538 PAK1Q13153 545 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms