RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 LMCD1Q9NZU5 365 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 CLNS1AP54105 237 aaKnown RBP12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 SNX14Q9Y5W7 946 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 ZNF608Q9ULD9 1512 aaPredicted RBP12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 ATF2P15336 505 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 BLZF1Q9H2G9 400 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 ADD3Q9UEY8 706 aaKnown RBP12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 IQCB1Q15051 598 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 EFCAB13Q8IY85 973 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 LARSQ9P2J5 1176 aaKnown RBP12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 KCNJ14Q9UNX9 436 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 ANGPTL3Q9Y5C1 460 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 ZMYM6O95789 1325 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 TTC4O95801 387 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 KRT40Q6A162 431 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 PRPF38AQ8NAV1 312 aaKnown RBP12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 MYL10Q9BUA6 226 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 CBX8Q9HC52 389 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 NLRC4Q9NPP4 1024 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 SEPT9Q9UHD8 586 aaPredicted RBP12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 SAT1P21673 171 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 ARMCX5Q6P1M9 558 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 RSRC2Q7L4I2 434 aaKnown RBP12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 NEK8Q86SG6 692 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 TRIM11Q96F44 468 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 PHACTR3Q96KR7 559 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 SLF1Q9BQI6 1058 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 WDR62O43379 1518 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 SPDYE2BA6NHP3 402 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 SGSM2O43147 1006 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 SPDYE6P0CI01 402 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 FAM47AQ5JRC9 791 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 CCDC124Q96CT7 223 aaKnown RBP12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 PNMA8AQ86V59 439 aaPredicted RBP12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 CPA1P15085 419 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 PDE6AP16499 860 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 NFKBIAP25963 317 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 C8orf34Q49A92 452 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 TTBK2Q6IQ55 1244 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 KIAA1841Q6NSI8 718 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 PPP1R2P3Q6NXS1 205 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 RYBPQ8N488 228 aaPredicted RBP12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 GBP5Q96PP8 586 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 PASKQ96RG2 1323 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 PNOCQ13519 176 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 TSC1Q92574 1164 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 CNKSR1Q969H4 720 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 OR52Z1P0C646 297 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 ICA1Q05084 483 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 KAZNQ674X7 775 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 OR8K1Q8NGG5 319 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 SNX25Q9H3E2 840 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 STK38LQ9Y2H1 464 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 DNAJC8O75937 253 aaPredicted RBP12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 CARD6Q9BX69 1037 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 BLMP54132 1417 aaPredicted RBP12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 ZAP70P43403 619 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 PTK2Q05397 1052 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 MIS18BP1Q6P0N0 1132 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 UBN1Q9NPG3 1134 aa12.19□□□□□ -0.46
CCDC144B-208ENST00000618081 DDAH1O94760 285 aa12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 NSFP46459 744 aaKnown RBP12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 BFSP1Q12934 665 aa12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 ABCB5Q2M3G0 1257 aa12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 ZNF215Q9UL58 517 aaPredicted RBP12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 LAD1O00515 517 aa12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 LONRF3Q496Y0 759 aa12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 NOSTRINQ8IVI9 506 aa12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 PPM1KQ8N3J5 372 aa12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 SPZ1Q9BXG8 430 aa12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 NUB1Q9Y5A7 615 aa12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 PCDHB4Q9Y5E5 795 aa12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 KRT24Q2M2I5 525 aa12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 ATP6V0A1Q93050 837 aa12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 MAD1L1Q9Y6D9 718 aa12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 MLH3Q9UHC1 1453 aa12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 OPHN1O60890 802 aa12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 A1BGP04217 495 aa12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 INHBAP08476 426 aa12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 KCTD2Q14681 263 aa12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 SPATS2Q86XZ4 545 aaKnown RBP12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 TCP10L2B9ZVM9 353 aa12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 SGK1O00141 431 aa12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 TSPYL2Q9H2G4 693 aaPredicted RBP12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 MYO10Q9HD67 2058 aa12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 ZSCAN20P17040 1043 aaPredicted RBP12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 POLA2Q14181 598 aa12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 ZNF274Q96GC6 653 aaPredicted RBP12.18□□□□□ -0.46
CCDC144B-208ENST00000618081 IGBP1P78318 339 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 PDCD2Q16342 344 aaPredicted RBP12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 PNMA1Q8ND90 353 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 hCG_1642624A0A1W2PR95 340 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 KLRF2D3W0D1 207 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 MED7O43513 233 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 KCNA6P17658 529 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 MYL7Q01449 175 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 ASPHQ12797 758 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 LRCH2Q5VUJ6 765 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 ANKRD42Q8N9B4 389 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms