RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 PTPRFP10586 1907 aa18.64■□□□□ 0.57
SNAP47-213ENST00000617596 UNCXA6NJT0 531 aa18.63■□□□□ 0.57
SNAP47-213ENST00000617596 hCG_1984214I3L0E3 225 aa18.63■□□□□ 0.57
SNAP47-213ENST00000617596 DSG3P32926 999 aa18.63■□□□□ 0.57
SNAP47-213ENST00000617596 ZNF713Q8N859 430 aaPredicted RBP18.63■□□□□ 0.57
SNAP47-213ENST00000617596 PROCA1Q8NCQ7 364 aaPredicted RBP18.63■□□□□ 0.57
SNAP47-213ENST00000617596 PGBD1Q96JS3 809 aa18.63■□□□□ 0.57
SNAP47-213ENST00000617596 GZF1Q9H116 711 aaPredicted RBP18.63■□□□□ 0.57
SNAP47-213ENST00000617596 SLC38A10Q9HBR0 1119 aa18.63■□□□□ 0.57
SNAP47-213ENST00000617596 SPDYE16A6NNV3 312 aaPredicted RBP18.62■□□□□ 0.57
SNAP47-213ENST00000617596 M0R2N6 131 aa18.62■□□□□ 0.57
SNAP47-213ENST00000617596 TOMM70O94826 608 aa18.62■□□□□ 0.57
SNAP47-213ENST00000617596 ADCY7P51828 1080 aa18.62■□□□□ 0.57
SNAP47-213ENST00000617596 JAKMIP3Q5VZ66 844 aa18.62■□□□□ 0.57
SNAP47-213ENST00000617596 GPAT2Q6NUI2 795 aa18.62■□□□□ 0.57
SNAP47-213ENST00000617596 USP17L6PQ6QN14 398 aa18.62■□□□□ 0.57
SNAP47-213ENST00000617596 POTEEQ6S8J3 1075 aa18.62■□□□□ 0.57
SNAP47-213ENST00000617596 MS4A4AQ96JQ5 239 aa18.62■□□□□ 0.57
SNAP47-213ENST00000617596 PSTPIP2Q9H939 334 aa18.62■□□□□ 0.57
SNAP47-213ENST00000617596 SMCHD1A6NHR9 2005 aa18.62■□□□□ 0.57
SNAP47-213ENST00000617596 OPLAHO14841 1288 aa18.62■□□□□ 0.57
SNAP47-213ENST00000617596 GNA11P29992 359 aa18.62■□□□□ 0.57
SNAP47-213ENST00000617596 TOB1P50616 345 aaPredicted RBP18.62■□□□□ 0.57
SNAP47-213ENST00000617596 ZNF157P51786 506 aaPredicted RBP18.62■□□□□ 0.57
SNAP47-213ENST00000617596 SPRYD7Q5W111 196 aa18.62■□□□□ 0.57
SNAP47-213ENST00000617596 HOMER2Q9NSB8 354 aa18.62■□□□□ 0.57
SNAP47-213ENST00000617596 CCPG1Q9ULG6 757 aa18.62■□□□□ 0.57
SNAP47-213ENST00000617596 CLIC4Q9Y696 253 aa18.62■□□□□ 0.57
SNAP47-213ENST00000617596 WNT7AO00755 349 aa18.61■□□□□ 0.57
SNAP47-213ENST00000617596 ICAM1P05362 532 aa18.61■□□□□ 0.57
SNAP47-213ENST00000617596 KRT85P78386 507 aa18.61■□□□□ 0.57
SNAP47-213ENST00000617596 DAGLBQ8NCG7 672 aa18.61■□□□□ 0.57
SNAP47-213ENST00000617596 TBC1D5Q92609 795 aa18.61■□□□□ 0.57
SNAP47-213ENST00000617596 P2RX7Q99572 595 aaKnown RBP18.61■□□□□ 0.57
SNAP47-213ENST00000617596 AGTPBP1Q9UPW5 1226 aa18.61■□□□□ 0.57
SNAP47-213ENST00000617596 CTDP1Q9Y5B0 961 aaPredicted RBP18.61■□□□□ 0.57
SNAP47-213ENST00000617596 CCL15-CCL14A0A0B4J2E2 113 aa18.61■□□□□ 0.57
SNAP47-213ENST00000617596 ESYT2A0FGR8 921 aa18.61■□□□□ 0.57
SNAP47-213ENST00000617596 ZBED4O75132 1171 aa18.61■□□□□ 0.57
SNAP47-213ENST00000617596 PRPF40AO75400 957 aaKnown RBP18.61■□□□□ 0.57
SNAP47-213ENST00000617596 CCL15Q16663 113 aa18.61■□□□□ 0.57
SNAP47-213ENST00000617596 PPP1R18Q6NYC8 613 aa18.61■□□□□ 0.57
SNAP47-213ENST00000617596 FASTKD5Q7L8L6 764 aaKnown RBP18.61■□□□□ 0.57
SNAP47-213ENST00000617596 REXO1Q8N1G1 1221 aaKnown RBP18.61■□□□□ 0.57
SNAP47-213ENST00000617596 BRI3BPQ8WY22 251 aa18.61■□□□□ 0.57
SNAP47-213ENST00000617596 CUL5Q93034 780 aa18.61■□□□□ 0.57
SNAP47-213ENST00000617596 ASCC2Q9H1I8 757 aaPredicted RBP18.61■□□□□ 0.57
SNAP47-213ENST00000617596 RIC8AQ9NPQ8 531 aa18.61■□□□□ 0.57
SNAP47-213ENST00000617596 RIPK3Q9Y572 518 aa18.61■□□□□ 0.57
SNAP47-213ENST00000617596 TRPM7Q96QT4 1865 aa18.6■□□□□ 0.57
SNAP47-213ENST00000617596 ALAS1P13196 640 aa18.6■□□□□ 0.57
SNAP47-213ENST00000617596 HOXA7P31268 230 aaPredicted RBP18.6■□□□□ 0.57
SNAP47-213ENST00000617596 HOXA13P31271 388 aaPredicted RBP18.6■□□□□ 0.57
SNAP47-213ENST00000617596 IRX3P78415 501 aaPredicted RBP18.6■□□□□ 0.57
SNAP47-213ENST00000617596 TMEM132BQ14DG7 1078 aa18.6■□□□□ 0.57
SNAP47-213ENST00000617596 GALNT17Q6IS24 598 aa18.6■□□□□ 0.57
SNAP47-213ENST00000617596 REPS2Q8NFH8 660 aa18.6■□□□□ 0.57
SNAP47-213ENST00000617596 HOXC10Q9NYD6 342 aa18.6■□□□□ 0.57
SNAP47-213ENST00000617596 ABT1Q9ULW3 272 aaKnown RBP18.6■□□□□ 0.57
SNAP47-213ENST00000617596 ADAMTS5Q9UNA0 930 aa18.6■□□□□ 0.57
SNAP47-213ENST00000617596 RLFQ13129 1914 aa18.6■□□□□ 0.57
SNAP47-213ENST00000617596 GTF2A2P52657 109 aa18.59■□□□□ 0.57
SNAP47-213ENST00000617596 PLS1Q14651 629 aa18.59■□□□□ 0.57
SNAP47-213ENST00000617596 RASAL3Q86YV0 1011 aa18.59■□□□□ 0.57
SNAP47-213ENST00000617596 ANP32BQ92688 251 aaKnown RBP18.59■□□□□ 0.57
SNAP47-213ENST00000617596 TCHHQ07283 1943 aa18.59■□□□□ 0.57
SNAP47-213ENST00000617596 CCDC194A0A1B0GVG4 234 aa18.59■□□□□ 0.57
SNAP47-213ENST00000617596 MEIS2O14770 477 aa18.59■□□□□ 0.57
SNAP47-213ENST00000617596 CYP2C8P10632 490 aa18.59■□□□□ 0.57
SNAP47-213ENST00000617596 INF2Q27J81 1249 aa18.59■□□□□ 0.57
SNAP47-213ENST00000617596 ZNF396Q96N95 335 aaPredicted RBP18.59■□□□□ 0.57
SNAP47-213ENST00000617596 PCDHB6Q9Y5E3 794 aa18.59■□□□□ 0.57
SNAP47-213ENST00000617596 LOC285556D6RIA3 1793 aa18.58■□□□□ 0.57
SNAP47-213ENST00000617596 BTBD19C9JJ37 291 aa18.58■□□□□ 0.56
SNAP47-213ENST00000617596 NFIBO00712 420 aa18.58■□□□□ 0.56
SNAP47-213ENST00000617596 CFBP00751 764 aa18.58■□□□□ 0.56
SNAP47-213ENST00000617596 CETPP11597 493 aa18.58■□□□□ 0.56
SNAP47-213ENST00000617596 MRPL12P52815 198 aaKnown RBP18.58■□□□□ 0.56
SNAP47-213ENST00000617596 GRM1Q13255 1194 aa18.58■□□□□ 0.56
SNAP47-213ENST00000617596 SF3A1Q15459 793 aaKnown RBP18.58■□□□□ 0.56
SNAP47-213ENST00000617596 PARP14Q460N5 1801 aa18.58■□□□□ 0.56
SNAP47-213ENST00000617596 MUM1L1Q5H9M0 696 aa18.58■□□□□ 0.56
SNAP47-213ENST00000617596 SNRNP48Q6IEG0 339 aaKnown RBP18.58■□□□□ 0.56
SNAP47-213ENST00000617596 RGMBQ6NW40 437 aa18.58■□□□□ 0.56
SNAP47-213ENST00000617596 LEO1Q8WVC0 666 aaPredicted RBP18.58■□□□□ 0.56
SNAP47-213ENST00000617596 SPATA32Q96LK8 384 aa18.58■□□□□ 0.56
SNAP47-213ENST00000617596 ZNF214Q9UL59 606 aaPredicted RBP18.58■□□□□ 0.56
SNAP47-213ENST00000617596 TLL2Q9Y6L7 1015 aa18.58■□□□□ 0.56
SNAP47-213ENST00000617596 GADD45BO75293 160 aaPredicted RBP18.57■□□□□ 0.56
SNAP47-213ENST00000617596 ZBTB48P10074 688 aaPredicted RBP18.57■□□□□ 0.56
SNAP47-213ENST00000617596 HERVK_113P62684 666 aa18.57■□□□□ 0.56
SNAP47-213ENST00000617596 FAM177A1Q8N128 213 aaPredicted RBP18.57■□□□□ 0.56
SNAP47-213ENST00000617596 BICD2Q8TD16 824 aa18.57■□□□□ 0.56
SNAP47-213ENST00000617596 PTPN18Q99952 460 aa18.57■□□□□ 0.56
SNAP47-213ENST00000617596 PAGR1Q9BTK6 254 aa18.57■□□□□ 0.56
SNAP47-213ENST00000617596 LMBRD1Q9NUN5 540 aa18.57■□□□□ 0.56
SNAP47-213ENST00000617596 BTBD7Q9P203 1132 aa18.57■□□□□ 0.56
SNAP47-213ENST00000617596 CFAP45Q9UL16 551 aa18.57■□□□□ 0.56
SNAP47-213ENST00000617596 TMEM88BA6NKF7 163 aa18.57■□□□□ 0.56
SNAP47-213ENST00000617596 PDHXO00330 501 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms