RNA–Protein interactions for RNA: ENST00000617564.1

COL4A2-210, Transcript of collagen type IV alpha 2 chain, humanhuman

Gene COL4A2, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-210ENST00000617564 FAM126BQ8IXS8 530 aa14.31□□□□□ -0.12
COL4A2-210ENST00000617564 ZNF444Q8N0Y2 327 aaPredicted RBP14.31□□□□□ -0.12
COL4A2-210ENST00000617564 OSBP2Q969R2 916 aa14.31□□□□□ -0.12
COL4A2-210ENST00000617564 CEP95Q96GE4 821 aa14.31□□□□□ -0.12
COL4A2-210ENST00000617564 KATNBL1Q9H079 304 aa14.31□□□□□ -0.12
COL4A2-210ENST00000617564 KCNH6Q9H252 994 aa14.31□□□□□ -0.12
COL4A2-210ENST00000617564 NKX2-4Q9H2Z4 354 aa14.31□□□□□ -0.12
COL4A2-210ENST00000617564 EPB41L4AQ9HCS5 686 aaPredicted RBP14.31□□□□□ -0.12
COL4A2-210ENST00000617564 MTMR4Q9NYA4 1195 aa14.31□□□□□ -0.12
COL4A2-210ENST00000617564 MYH4Q9Y623 1939 aa14.31□□□□□ -0.12
COL4A2-210ENST00000617564 CHD7Q9P2D1 2997 aa14.3□□□□□ -0.12
COL4A2-210ENST00000617564 RNF113AO15541 343 aaKnown RBP14.3□□□□□ -0.12
COL4A2-210ENST00000617564 GPAA1O43292 621 aa14.3□□□□□ -0.12
COL4A2-210ENST00000617564 SLC4A3P48751 1232 aa14.3□□□□□ -0.12
COL4A2-210ENST00000617564 TDO2P48775 406 aa14.3□□□□□ -0.12
COL4A2-210ENST00000617564 LRRFIP1Q32MZ4 808 aaKnown RBP14.3□□□□□ -0.12
COL4A2-210ENST00000617564 STK11IPQ8N1F8 1099 aa14.3□□□□□ -0.12
COL4A2-210ENST00000617564 VTI1AQ96AJ9 217 aa14.3□□□□□ -0.12
COL4A2-210ENST00000617564 SEZ6LQ9BYH1 1024 aa14.3□□□□□ -0.12
COL4A2-210ENST00000617564 MTIF3Q9H2K0 278 aaKnown RBP14.3□□□□□ -0.12
COL4A2-210ENST00000617564 ACAD9Q9H845 621 aa14.3□□□□□ -0.12
COL4A2-210ENST00000617564 COG5Q9UP83 839 aa14.3□□□□□ -0.12
COL4A2-210ENST00000617564 SMARCA5O60264 1052 aaPredicted RBP14.29□□□□□ -0.12
COL4A2-210ENST00000617564 CABYRO75952 493 aa14.29□□□□□ -0.12
COL4A2-210ENST00000617564 BMP3P12645 472 aa14.29□□□□□ -0.12
COL4A2-210ENST00000617564 CSF2RAP15509 400 aa14.29□□□□□ -0.12
COL4A2-210ENST00000617564 STAT2P52630 851 aa14.29□□□□□ -0.12
COL4A2-210ENST00000617564 TKFCQ3LXA3 575 aa14.29□□□□□ -0.12
COL4A2-210ENST00000617564 PPP4R3BQ5MIZ7 849 aa14.29□□□□□ -0.12
COL4A2-210ENST00000617564 SLFN13Q68D06 897 aa14.29□□□□□ -0.12
COL4A2-210ENST00000617564 C16orf59Q7L2K0 433 aa14.29□□□□□ -0.12
COL4A2-210ENST00000617564 FAM160B2Q86V87 743 aa14.29□□□□□ -0.12
COL4A2-210ENST00000617564 CCDC144CPQ8IYA2 1237 aa14.29□□□□□ -0.12
COL4A2-210ENST00000617564 LRRC47Q8N1G4 583 aaKnown RBP14.29□□□□□ -0.12
COL4A2-210ENST00000617564 FAM133AQ8N9E0 248 aa14.29□□□□□ -0.12
COL4A2-210ENST00000617564 NEDD1Q8NHV4 660 aa14.29□□□□□ -0.12
COL4A2-210ENST00000617564 GMCL1Q96IK5 515 aa14.29□□□□□ -0.12
COL4A2-210ENST00000617564 USP34Q70CQ2 3546 aa14.29□□□□□ -0.12
COL4A2-210ENST00000617564 ASB14A6NK59 587 aa14.28□□□□□ -0.12
COL4A2-210ENST00000617564 CTAGE5O15320 804 aa14.28□□□□□ -0.12
COL4A2-210ENST00000617564 ST18O60284 1047 aa14.28□□□□□ -0.12
COL4A2-210ENST00000617564 MCM3APO60318 1980 aa14.28□□□□□ -0.12
COL4A2-210ENST00000617564 PRDM1O75626 825 aa14.28□□□□□ -0.12
COL4A2-210ENST00000617564 CD4P01730 458 aa14.28□□□□□ -0.12
COL4A2-210ENST00000617564 TSPY3P0CV98 308 aa14.28□□□□□ -0.12
COL4A2-210ENST00000617564 TSPY8P0CW00 308 aa14.28□□□□□ -0.12
COL4A2-210ENST00000617564 IRX5P78411 483 aaPredicted RBP14.28□□□□□ -0.12
COL4A2-210ENST00000617564 PDE4BQ07343 736 aa14.28□□□□□ -0.12
COL4A2-210ENST00000617564 CSPP1Q1MSJ5 1256 aa14.28□□□□□ -0.12
COL4A2-210ENST00000617564 SLC43A3Q8NBI5 491 aa14.28□□□□□ -0.12
COL4A2-210ENST00000617564 CHURC1Q8WUH1 139 aa14.28□□□□□ -0.12
COL4A2-210ENST00000617564 NACAP1Q9BZK3 213 aa14.28□□□□□ -0.12
COL4A2-210ENST00000617564 PPP1R12CQ9BZL4 782 aa14.28□□□□□ -0.12
COL4A2-210ENST00000617564 IL23AQ9NPF7 189 aa14.28□□□□□ -0.12
COL4A2-210ENST00000617564 A1CFQ9NQ94 594 aaKnown RBP14.28□□□□□ -0.12
COL4A2-210ENST00000617564 PATL2C9JE40 543 aaKnown RBP14.27□□□□□ -0.13
COL4A2-210ENST00000617564 TMEM232C9JQI7 657 aa14.27□□□□□ -0.13
COL4A2-210ENST00000617564 ZEB2O60315 1214 aa14.27□□□□□ -0.13
COL4A2-210ENST00000617564 PLA2G6O60733 806 aa14.27□□□□□ -0.13
COL4A2-210ENST00000617564 APPP05067 770 aa14.27□□□□□ -0.13
COL4A2-210ENST00000617564 SLC3A2P08195 630 aaKnown RBP14.27□□□□□ -0.13
COL4A2-210ENST00000617564 CNTN2Q02246 1040 aa14.27□□□□□ -0.13
COL4A2-210ENST00000617564 TNFAIP2Q03169 654 aa14.27□□□□□ -0.13
COL4A2-210ENST00000617564 ZNF365Q70YC5 407 aa14.27□□□□□ -0.13
COL4A2-210ENST00000617564 TLK2Q86UE8 772 aa14.27□□□□□ -0.13
COL4A2-210ENST00000617564 IFNL3Q8IZI9 196 aa14.27□□□□□ -0.13
COL4A2-210ENST00000617564 HOMER2Q9NSB8 354 aa14.27□□□□□ -0.13
COL4A2-210ENST00000617564 RNF146Q9NTX7 359 aa14.27□□□□□ -0.13
COL4A2-210ENST00000617564 GNEQ9Y223 722 aaKnown RBP14.27□□□□□ -0.13
COL4A2-210ENST00000617564 ASTN1O14525 1302 aa14.26□□□□□ -0.13
COL4A2-210ENST00000617564 M0R2C6 588 aa14.26□□□□□ -0.13
COL4A2-210ENST00000617564 STAG1Q8WVM7 1258 aa14.26□□□□□ -0.13
COL4A2-210ENST00000617564 HIPK3Q9H422 1215 aa14.26□□□□□ -0.13
COL4A2-210ENST00000617564 CD320Q9NPF0 282 aa14.26□□□□□ -0.13
COL4A2-210ENST00000617564 YBX2Q9Y2T7 364 aaKnown RBP14.26□□□□□ -0.13
COL4A2-210ENST00000617564 Q9Y3F1 56 aa14.26□□□□□ -0.13
COL4A2-210ENST00000617564 ZNF536O15090 1300 aa14.25□□□□□ -0.13
COL4A2-210ENST00000617564 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.25□□□□□ -0.13
COL4A2-210ENST00000617564 SOWAHBA6NEL2 793 aa14.25□□□□□ -0.13
COL4A2-210ENST00000617564 GTPBP6O43824 516 aaPredicted RBP14.25□□□□□ -0.13
COL4A2-210ENST00000617564 ACRP10323 421 aa14.25□□□□□ -0.13
COL4A2-210ENST00000617564 SLC1A4P43007 532 aa14.25□□□□□ -0.13
COL4A2-210ENST00000617564 BEX3Q00994 111 aa14.25□□□□□ -0.13
COL4A2-210ENST00000617564 IKQ13123 557 aaPredicted RBP14.25□□□□□ -0.13
COL4A2-210ENST00000617564 FSCN1Q16658 493 aaKnown RBP14.25□□□□□ -0.13
COL4A2-210ENST00000617564 CXCL17Q6UXB2 119 aa14.25□□□□□ -0.13
COL4A2-210ENST00000617564 NOL8Q76FK4 1167 aaKnown RBP14.25□□□□□ -0.13
COL4A2-210ENST00000617564 AP5M1Q9H0R1 490 aa14.25□□□□□ -0.13
COL4A2-210ENST00000617564 NAPBQ9H115 298 aa14.25□□□□□ -0.13
COL4A2-210ENST00000617564 DCTPP1Q9H773 170 aa14.25□□□□□ -0.13
COL4A2-210ENST00000617564 ISY1Q9ULR0 285 aaKnown RBP14.25□□□□□ -0.13
COL4A2-210ENST00000617564 TTC41PQ6P2S7 1318 aa14.24□□□□□ -0.13
COL4A2-210ENST00000617564 FGBP02675 491 aa14.24□□□□□ -0.13
COL4A2-210ENST00000617564 CYP2C18P33260 490 aa14.24□□□□□ -0.13
COL4A2-210ENST00000617564 TFAP4Q01664 338 aa14.24□□□□□ -0.13
COL4A2-210ENST00000617564 PPARAQ07869 468 aa14.24□□□□□ -0.13
COL4A2-210ENST00000617564 ITGA7Q13683 1181 aa14.24□□□□□ -0.13
COL4A2-210ENST00000617564 PPP2R2DQ66LE6 453 aa14.24□□□□□ -0.13
COL4A2-210ENST00000617564 IQSEC1Q6DN90 963 aa14.24□□□□□ -0.13
COL4A2-210ENST00000617564 HLA-CQ95604 372 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms