RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 LETM2Q2VYF4 491 aa23.44■■□□□ 1.34
CNTNAP3B-212ENST00000617422 CNNM3Q8NE01 707 aa23.44■■□□□ 1.34
CNTNAP3B-212ENST00000617422 PCDHA1Q9Y5I3 950 aa23.44■■□□□ 1.34
CNTNAP3B-212ENST00000617422 BIN1O00499 593 aa23.44■■□□□ 1.34
CNTNAP3B-212ENST00000617422 ZNF165P49910 485 aa23.44■■□□□ 1.34
CNTNAP3B-212ENST00000617422 GRAMD1CQ8IYS0 662 aa23.44■■□□□ 1.34
CNTNAP3B-212ENST00000617422 PRR12Q9ULL5 1215 aa23.44■■□□□ 1.34
CNTNAP3B-212ENST00000617422 FZD1Q9UP38 647 aa23.44■■□□□ 1.34
CNTNAP3B-212ENST00000617422 ASNSP08243 561 aa23.43■■□□□ 1.34
CNTNAP3B-212ENST00000617422 IKQ13123 557 aaPredicted RBP23.43■■□□□ 1.34
CNTNAP3B-212ENST00000617422 ARL6IP4Q66PJ3 421 aaKnown RBP23.43■■□□□ 1.34
CNTNAP3B-212ENST00000617422 NEK8Q86SG6 692 aa23.43■■□□□ 1.34
CNTNAP3B-212ENST00000617422 VCPKMTQ9H867 229 aa23.43■■□□□ 1.34
CNTNAP3B-212ENST00000617422 CDC25AP30304 524 aa23.42■■□□□ 1.34
CNTNAP3B-212ENST00000617422 DPCR1Q3MIW9 517 aa23.42■■□□□ 1.34
CNTNAP3B-212ENST00000617422 TUBE1Q9UJT0 475 aa23.42■■□□□ 1.34
CNTNAP3B-212ENST00000617422 MYH7BA7E2Y1 1941 aa23.42■■□□□ 1.34
CNTNAP3B-212ENST00000617422 CCNT1O60563 726 aaKnown RBP23.42■■□□□ 1.34
CNTNAP3B-212ENST00000617422 DDNO94850 711 aaPredicted RBP23.42■■□□□ 1.34
CNTNAP3B-212ENST00000617422 PRR29P0C7W0 189 aa23.42■■□□□ 1.34
CNTNAP3B-212ENST00000617422 IQCB1Q15051 598 aa23.42■■□□□ 1.34
CNTNAP3B-212ENST00000617422 P2RX7Q99572 595 aaKnown RBP23.42■■□□□ 1.34
CNTNAP3B-212ENST00000617422 PSTPIP2Q9H939 334 aa23.42■■□□□ 1.34
CNTNAP3B-212ENST00000617422 GOPCQ9HD26 462 aa23.42■■□□□ 1.34
CNTNAP3B-212ENST00000617422 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.42■■□□□ 1.34
CNTNAP3B-212ENST00000617422 POLR2AP24928 1970 aaKnown RBP23.42■■□□□ 1.34
CNTNAP3B-212ENST00000617422 UQCRHLA0A096LP55 91 aa23.41■■□□□ 1.34
CNTNAP3B-212ENST00000617422 USP17L15C9J2P7 530 aa23.41■■□□□ 1.34
CNTNAP3B-212ENST00000617422 USP17L13C9JLJ4 530 aa23.41■■□□□ 1.34
CNTNAP3B-212ENST00000617422 USP17L11C9JVI0 530 aa23.41■■□□□ 1.34
CNTNAP3B-212ENST00000617422 USP17L18D6R9N7 530 aa23.41■■□□□ 1.34
CNTNAP3B-212ENST00000617422 USP17L22D6RA61 530 aa23.41■■□□□ 1.34
CNTNAP3B-212ENST00000617422 USP17L17D6RBQ6 530 aa23.41■■□□□ 1.34
CNTNAP3B-212ENST00000617422 USP17L19D6RCP7 530 aa23.41■■□□□ 1.34
CNTNAP3B-212ENST00000617422 USP17L20D6RJB6 530 aa23.41■■□□□ 1.34
CNTNAP3B-212ENST00000617422 UQCRHP07919 91 aa23.41■■□□□ 1.34
CNTNAP3B-212ENST00000617422 INPP5BP32019 993 aa23.41■■□□□ 1.34
CNTNAP3B-212ENST00000617422 USP17L24Q0WX57 530 aa23.41■■□□□ 1.34
CNTNAP3B-212ENST00000617422 ISM2Q6H9L7 571 aa23.41■■□□□ 1.34
CNTNAP3B-212ENST00000617422 USP17L6PQ6QN14 398 aa23.41■■□□□ 1.34
CNTNAP3B-212ENST00000617422 CUL5Q93034 780 aa23.41■■□□□ 1.34
CNTNAP3B-212ENST00000617422 DYNC1I1O14576 645 aa23.41■■□□□ 1.34
CNTNAP3B-212ENST00000617422 DGKZQ13574 1117 aa23.41■■□□□ 1.34
CNTNAP3B-212ENST00000617422 DHX58Q96C10 678 aa23.41■■□□□ 1.34
CNTNAP3B-212ENST00000617422 ZNF341Q9BYN7 854 aa23.41■■□□□ 1.34
CNTNAP3B-212ENST00000617422 STAT2P52630 851 aa23.4■■□□□ 1.34
CNTNAP3B-212ENST00000617422 USH1GQ495M9 461 aa23.4■■□□□ 1.34
CNTNAP3B-212ENST00000617422 ANO10Q9NW15 660 aa23.4■■□□□ 1.34
CNTNAP3B-212ENST00000617422 GGA3Q9NZ52 723 aa23.4■■□□□ 1.34
CNTNAP3B-212ENST00000617422 PP2D1A8MPX8 630 aa23.4■■□□□ 1.34
CNTNAP3B-212ENST00000617422 OPLAHO14841 1288 aa23.4■■□□□ 1.34
CNTNAP3B-212ENST00000617422 AMNQ9BXJ7 453 aa23.4■■□□□ 1.34
CNTNAP3B-212ENST00000617422 FBXO28Q9NVF7 368 aa23.4■■□□□ 1.34
CNTNAP3B-212ENST00000617422 PCDHA5Q9Y5H7 936 aa23.4■■□□□ 1.34
CNTNAP3B-212ENST00000617422 TDP2O95551 362 aa23.39■■□□□ 1.33
CNTNAP3B-212ENST00000617422 MRPL12P52815 198 aaKnown RBP23.39■■□□□ 1.33
CNTNAP3B-212ENST00000617422 POTEDQ86YR6 584 aa23.39■■□□□ 1.33
CNTNAP3B-212ENST00000617422 RNF181Q9P0P0 153 aa23.39■■□□□ 1.33
CNTNAP3B-212ENST00000617422 MEIS2O14770 477 aa23.38■■□□□ 1.33
CNTNAP3B-212ENST00000617422 SLC37A4O43826 429 aa23.38■■□□□ 1.33
CNTNAP3B-212ENST00000617422 E2F4Q16254 413 aa23.38■■□□□ 1.33
CNTNAP3B-212ENST00000617422 MTERF4Q7Z6M4 381 aaKnown RBP23.38■■□□□ 1.33
CNTNAP3B-212ENST00000617422 FBXO11Q86XK2 927 aa23.38■■□□□ 1.33
CNTNAP3B-212ENST00000617422 ELOA2Q8IYF1 753 aaPredicted RBP23.38■■□□□ 1.33
CNTNAP3B-212ENST00000617422 NEMFO60524 1076 aa23.38■■□□□ 1.33
CNTNAP3B-212ENST00000617422 POSTNQ15063 836 aa23.38■■□□□ 1.33
CNTNAP3B-212ENST00000617422 DLK2Q6UY11 383 aa23.38■■□□□ 1.33
CNTNAP3B-212ENST00000617422 ILDR2Q71H61 639 aa23.38■■□□□ 1.33
CNTNAP3B-212ENST00000617422 DHX40Q8IX18 779 aaKnown RBP23.38■■□□□ 1.33
CNTNAP3B-212ENST00000617422 SSC5DA1L4H1 1573 aa23.38■■□□□ 1.33
CNTNAP3B-212ENST00000617422 CTNND1O60716 968 aaKnown RBP23.37■■□□□ 1.33
CNTNAP3B-212ENST00000617422 BMP6P22004 513 aa23.37■■□□□ 1.33
CNTNAP3B-212ENST00000617422 LONP1P36776 959 aaKnown RBP23.37■■□□□ 1.33
CNTNAP3B-212ENST00000617422 NLRP12P59046 1061 aa23.37■■□□□ 1.33
CNTNAP3B-212ENST00000617422 DTHD1Q6ZMT9 781 aa23.37■■□□□ 1.33
CNTNAP3B-212ENST00000617422 ADCY5O95622 1261 aa23.37■■□□□ 1.33
CNTNAP3B-212ENST00000617422 CASP1P29466 404 aa23.37■■□□□ 1.33
CNTNAP3B-212ENST00000617422 APOBEC3FQ8IUX4 373 aaKnown RBP23.37■■□□□ 1.33
CNTNAP3B-212ENST00000617422 DOCK1Q14185 1865 aa23.36■■□□□ 1.33
CNTNAP3B-212ENST00000617422 LAD1O00515 517 aa23.36■■□□□ 1.33
CNTNAP3B-212ENST00000617422 OR52Z1P0C646 297 aa23.36■■□□□ 1.33
CNTNAP3B-212ENST00000617422 SLFN14P0C7P3 912 aa23.36■■□□□ 1.33
CNTNAP3B-212ENST00000617422 PRPHP41219 470 aa23.36■■□□□ 1.33
CNTNAP3B-212ENST00000617422 SH3RF1Q7Z6J0 888 aa23.36■■□□□ 1.33
CNTNAP3B-212ENST00000617422 ZKSCAN4Q969J2 545 aaPredicted RBP23.36■■□□□ 1.33
CNTNAP3B-212ENST00000617422 KIFC2Q96AC6 838 aa23.36■■□□□ 1.33
CNTNAP3B-212ENST00000617422 CAVIN2O95810 425 aa23.35■■□□□ 1.33
CNTNAP3B-212ENST00000617422 MTMR9Q96QG7 549 aa23.35■■□□□ 1.33
CNTNAP3B-212ENST00000617422 SH2D4AQ9H788 454 aa23.35■■□□□ 1.33
CNTNAP3B-212ENST00000617422 SARSP49591 514 aaKnown RBP23.35■■□□□ 1.33
CNTNAP3B-212ENST00000617422 PLCB2Q00722 1185 aa23.35■■□□□ 1.33
CNTNAP3B-212ENST00000617422 LRRC15Q8TF66 581 aa23.35■■□□□ 1.33
CNTNAP3B-212ENST00000617422 PAGE5Q96GU1 130 aa23.35■■□□□ 1.33
CNTNAP3B-212ENST00000617422 FEZ1Q99689 392 aa23.35■■□□□ 1.33
CNTNAP3B-212ENST00000617422 MTRQ99707 1265 aa23.35■■□□□ 1.33
CNTNAP3B-212ENST00000617422 ZNF112Q9UJU3 913 aa23.35■■□□□ 1.33
CNTNAP3B-212ENST00000617422 AFMP43652 599 aa23.34■■□□□ 1.33
CNTNAP3B-212ENST00000617422 KARSQ15046 597 aaKnown RBP23.34■■□□□ 1.33
CNTNAP3B-212ENST00000617422 PDXDC2PQ6P474 469 aa23.34■■□□□ 1.33
CNTNAP3B-212ENST00000617422 CEP57L1Q8IYX8 460 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms