RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 FAM205CA6NFA0 338 aa17.39■□□□□ 0.38
CBWD1-225ENST00000616944 APLP1P51693 650 aa17.39■□□□□ 0.38
CBWD1-225ENST00000616944 ATL3Q6DD88 541 aa17.39■□□□□ 0.38
CBWD1-225ENST00000616944 RGMBQ6NW40 437 aa17.39■□□□□ 0.38
CBWD1-225ENST00000616944 TEX2Q8IWB9 1127 aa17.39■□□□□ 0.38
CBWD1-225ENST00000616944 REXO1Q8N1G1 1221 aaKnown RBP17.39■□□□□ 0.38
CBWD1-225ENST00000616944 BICD2Q8TD16 824 aa17.39■□□□□ 0.38
CBWD1-225ENST00000616944 RASGRP4Q8TDF6 673 aa17.39■□□□□ 0.38
CBWD1-225ENST00000616944 BRI3BPQ8WY22 251 aa17.39■□□□□ 0.38
CBWD1-225ENST00000616944 CUL5Q93034 780 aa17.39■□□□□ 0.38
CBWD1-225ENST00000616944 HHIPL1Q96JK4 782 aa17.39■□□□□ 0.38
CBWD1-225ENST00000616944 TESPA1A2RU30 521 aaPredicted RBP17.39■□□□□ 0.37
CBWD1-225ENST00000616944 TMEM88BA6NKF7 163 aa17.39■□□□□ 0.37
CBWD1-225ENST00000616944 MEIS2O14770 477 aa17.39■□□□□ 0.37
CBWD1-225ENST00000616944 ZBED4O75132 1171 aa17.39■□□□□ 0.37
CBWD1-225ENST00000616944 SLC10A3P09131 477 aa17.39■□□□□ 0.37
CBWD1-225ENST00000616944 TOB1P50616 345 aaPredicted RBP17.39■□□□□ 0.37
CBWD1-225ENST00000616944 ZNF157P51786 506 aaPredicted RBP17.39■□□□□ 0.37
CBWD1-225ENST00000616944 HTRA3P83110 453 aa17.39■□□□□ 0.37
CBWD1-225ENST00000616944 MKRN3Q13064 507 aaKnown RBP17.39■□□□□ 0.37
CBWD1-225ENST00000616944 GLT8D2Q9H1C3 349 aa17.39■□□□□ 0.37
CBWD1-225ENST00000616944 PSTPIP2Q9H939 334 aa17.39■□□□□ 0.37
CBWD1-225ENST00000616944 RAVER2Q9HCJ3 691 aaKnown RBP17.39■□□□□ 0.37
CBWD1-225ENST00000616944 PNMA2Q9UL42 364 aa17.39■□□□□ 0.37
CBWD1-225ENST00000616944 CCPG1Q9ULG6 757 aa17.39■□□□□ 0.37
CBWD1-225ENST00000616944 CNPY2Q9Y2B0 182 aa17.39■□□□□ 0.37
CBWD1-225ENST00000616944 SLC45A1Q9Y2W3 748 aa17.39■□□□□ 0.37
CBWD1-225ENST00000616944 CCL15-CCL14A0A0B4J2E2 113 aa17.38■□□□□ 0.37
CBWD1-225ENST00000616944 KRT85P78386 507 aa17.38■□□□□ 0.37
CBWD1-225ENST00000616944 IRX3P78415 501 aaPredicted RBP17.38■□□□□ 0.37
CBWD1-225ENST00000616944 PABPC4Q13310 644 aaKnown RBP eCLIP17.38■□□□□ 0.37
CBWD1-225ENST00000616944 TMEM132BQ14DG7 1078 aa17.38■□□□□ 0.37
CBWD1-225ENST00000616944 CCL15Q16663 113 aa17.38■□□□□ 0.37
CBWD1-225ENST00000616944 USP28Q96RU2 1077 aa17.38■□□□□ 0.37
CBWD1-225ENST00000616944 P2RX7Q99572 595 aaKnown RBP17.38■□□□□ 0.37
CBWD1-225ENST00000616944 FTOQ9C0B1 505 aaKnown RBP eCLIP17.38■□□□□ 0.37
CBWD1-225ENST00000616944 FAM155AB1AL88 458 aaPredicted RBP17.37■□□□□ 0.37
CBWD1-225ENST00000616944 PIK3CDO00329 1044 aa17.37■□□□□ 0.37
CBWD1-225ENST00000616944 MCM4P33991 863 aa17.37■□□□□ 0.37
CBWD1-225ENST00000616944 MRPL12P52815 198 aaKnown RBP17.37■□□□□ 0.37
CBWD1-225ENST00000616944 HERVK_113P62684 666 aa17.37■□□□□ 0.37
CBWD1-225ENST00000616944 GHRHRQ02643 423 aa17.37■□□□□ 0.37
CBWD1-225ENST00000616944 NFKBIBQ15653 356 aa17.37■□□□□ 0.37
CBWD1-225ENST00000616944 RILPL1Q5EBL4 403 aa17.37■□□□□ 0.37
CBWD1-225ENST00000616944 PIK3AP1Q6ZUJ8 805 aa17.37■□□□□ 0.37
CBWD1-225ENST00000616944 ANKRD23Q86SG2 305 aa17.37■□□□□ 0.37
CBWD1-225ENST00000616944 CPXCR1Q8N123 301 aa17.37■□□□□ 0.37
CBWD1-225ENST00000616944 MB21D1Q8N884 522 aa17.37■□□□□ 0.37
CBWD1-225ENST00000616944 TMEM87AQ8NBN3 555 aa17.37■□□□□ 0.37
CBWD1-225ENST00000616944 CLEC4DQ8WXI8 215 aa17.37■□□□□ 0.37
CBWD1-225ENST00000616944 PTPN18Q99952 460 aa17.37■□□□□ 0.37
CBWD1-225ENST00000616944 POLR3EQ9NVU0 708 aa17.37■□□□□ 0.37
CBWD1-225ENST00000616944 MRPL11Q9Y3B7 192 aaKnown RBP17.37■□□□□ 0.37
CBWD1-225ENST00000616944 BTBD19C9JJ37 291 aa17.36■□□□□ 0.37
CBWD1-225ENST00000616944 UBE2SQ16763 222 aa17.36■□□□□ 0.37
CBWD1-225ENST00000616944 USP17L6PQ6QN14 398 aa17.36■□□□□ 0.37
CBWD1-225ENST00000616944 KRT25Q7Z3Z0 450 aa17.36■□□□□ 0.37
CBWD1-225ENST00000616944 ZNF396Q96N95 335 aaPredicted RBP17.36■□□□□ 0.37
CBWD1-225ENST00000616944 TMEM260Q9NX78 707 aa17.36■□□□□ 0.37
CBWD1-225ENST00000616944 TFIP11Q9UBB9 837 aaKnown RBP17.36■□□□□ 0.37
CBWD1-225ENST00000616944 BIN2Q9UBW5 565 aaPredicted RBP17.36■□□□□ 0.37
CBWD1-225ENST00000616944 WNT7AO00755 349 aa17.36■□□□□ 0.37
CBWD1-225ENST00000616944 TRAPPC10P48553 1259 aa17.36■□□□□ 0.37
CBWD1-225ENST00000616944 NASPP49321 788 aaPredicted RBP17.36■□□□□ 0.37
CBWD1-225ENST00000616944 FAM43AQ8N2R8 423 aa17.36■□□□□ 0.37
CBWD1-225ENST00000616944 TEX13BQ9BXU2 312 aa17.36■□□□□ 0.37
CBWD1-225ENST00000616944 GDPD2Q9HCC8 539 aa17.36■□□□□ 0.37
CBWD1-225ENST00000616944 CREBZFQ9NS37 354 aa17.36■□□□□ 0.37
CBWD1-225ENST00000616944 RTEL1Q9NZ71 1219 aa17.36■□□□□ 0.37
CBWD1-225ENST00000616944 BTBD7Q9P203 1132 aa17.36■□□□□ 0.37
CBWD1-225ENST00000616944 CFAP45Q9UL16 551 aa17.36■□□□□ 0.37
CBWD1-225ENST00000616944 RIPK3Q9Y572 518 aa17.36■□□□□ 0.37
CBWD1-225ENST00000616944 ZNFX1Q9P2E3 1918 aaKnown RBP17.35■□□□□ 0.37
CBWD1-225ENST00000616944 ELP1O95163 1332 aa17.35■□□□□ 0.37
CBWD1-225ENST00000616944 CCDC194A0A1B0GVG4 234 aa17.35■□□□□ 0.37
CBWD1-225ENST00000616944 NFIBO00712 420 aa17.35■□□□□ 0.37
CBWD1-225ENST00000616944 CNMDO75829 334 aa17.35■□□□□ 0.37
CBWD1-225ENST00000616944 ALAS1P13196 640 aa17.35■□□□□ 0.37
CBWD1-225ENST00000616944 OSBPP22059 807 aa17.35■□□□□ 0.37
CBWD1-225ENST00000616944 MUM1L1Q5H9M0 696 aa17.35■□□□□ 0.37
CBWD1-225ENST00000616944 JAKMIP3Q5VZ66 844 aa17.35■□□□□ 0.37
CBWD1-225ENST00000616944 SNRNP48Q6IEG0 339 aaKnown RBP17.35■□□□□ 0.37
CBWD1-225ENST00000616944 SCAND2PQ9GZW5 306 aaPredicted RBP17.35■□□□□ 0.37
CBWD1-225ENST00000616944 PNMA3Q9UL41 463 aa17.35■□□□□ 0.37
CBWD1-225ENST00000616944 CTDP1Q9Y5B0 961 aaPredicted RBP17.35■□□□□ 0.37
CBWD1-225ENST00000616944 CLIC4Q9Y696 253 aa17.35■□□□□ 0.37
CBWD1-225ENST00000616944 PDHXO00330 501 aa17.34■□□□□ 0.37
CBWD1-225ENST00000616944 FIBPO43427 364 aa17.34■□□□□ 0.37
CBWD1-225ENST00000616944 NCLP19338 710 aaKnown RBP17.34■□□□□ 0.37
CBWD1-225ENST00000616944 HSD17B4P51659 736 aa17.34■□□□□ 0.37
CBWD1-225ENST00000616944 AP3B2Q13367 1082 aa17.34■□□□□ 0.37
CBWD1-225ENST00000616944 NBR1Q14596 966 aa17.34■□□□□ 0.37
CBWD1-225ENST00000616944 ANO1Q5XXA6 986 aa17.34■□□□□ 0.37
CBWD1-225ENST00000616944 LEO1Q8WVC0 666 aaPredicted RBP17.34■□□□□ 0.37
CBWD1-225ENST00000616944 TBC1D5Q92609 795 aa17.34■□□□□ 0.37
CBWD1-225ENST00000616944 RCOR1Q9UKL0 485 aa17.34■□□□□ 0.37
CBWD1-225ENST00000616944 ABT1Q9ULW3 272 aaKnown RBP17.34■□□□□ 0.37
CBWD1-225ENST00000616944 MANSC4A6NHS7 340 aaPredicted RBP17.33■□□□□ 0.37
CBWD1-225ENST00000616944 EDIL3O43854 480 aa17.33■□□□□ 0.37
CBWD1-225ENST00000616944 YEATS4O95619 227 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms