RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 DNAJC18Q9H819 358 aa12.87□□□□□ -0.35
PCDHGA9-202ENST00000616887 ZNF287Q9HBT7 754 aa12.87□□□□□ -0.35
PCDHGA9-202ENST00000616887 CCDC194A0A1B0GVG4 234 aa12.87□□□□□ -0.35
PCDHGA9-202ENST00000616887 TBC1D8O95759 1140 aa12.87□□□□□ -0.35
PCDHGA9-202ENST00000616887 SHMT1P34896 483 aa12.87□□□□□ -0.35
PCDHGA9-202ENST00000616887 NAPAP54920 295 aa12.87□□□□□ -0.35
PCDHGA9-202ENST00000616887 MORC3Q14149 939 aa12.87□□□□□ -0.35
PCDHGA9-202ENST00000616887 E2F4Q16254 413 aa12.87□□□□□ -0.35
PCDHGA9-202ENST00000616887 KLHL10Q6JEL2 608 aa12.87□□□□□ -0.35
PCDHGA9-202ENST00000616887 C4orf32Q8N8J7 132 aa12.87□□□□□ -0.35
PCDHGA9-202ENST00000616887 PLIN2Q99541 437 aa12.87□□□□□ -0.35
PCDHGA9-202ENST00000616887 INTS13Q9NVM9 706 aa12.87□□□□□ -0.35
PCDHGA9-202ENST00000616887 MTMR4Q9NYA4 1195 aa12.87□□□□□ -0.35
PCDHGA9-202ENST00000616887 ADAM21Q9UKJ8 722 aa12.87□□□□□ -0.35
PCDHGA9-202ENST00000616887 SCN9AQ15858 1988 aa12.87□□□□□ -0.35
PCDHGA9-202ENST00000616887 IKBKBO14920 756 aa12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 TOP1P11387 765 aaKnown RBP12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 CD44P16070 742 aaKnown RBP12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 GNAQP50148 359 aa12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 RBM5P52756 815 aaKnown RBP eCLIP12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 STX17P56962 302 aa12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 KARSQ15046 597 aaKnown RBP12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 NT5DC1Q5TFE4 455 aa12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 E4F1Q66K89 784 aaPredicted RBP12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 ARMCX5Q6P1M9 558 aa12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 BANK1Q8NDB2 785 aa12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 TEKT1Q969V4 418 aa12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 FERMT2Q96AC1 680 aa12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 PPP1R13BQ96KQ4 1090 aa12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 GPCPD1Q9NPB8 672 aa12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 SERPINB13Q9UIV8 391 aa12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 SLX4Q8IY92 1834 aa12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 MPHOSPH10O00566 681 aaKnown RBP12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 ECE2O60344 883 aa12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 SERPINC1P01008 464 aa12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 CALML3P27482 149 aa12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 TTBK2Q6IQ55 1244 aa12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 MNS1Q8NEH6 495 aa12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 CNKSR1Q969H4 720 aa12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 COA7Q96BR5 231 aa12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 TMEM260Q9NX78 707 aa12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 NFE2L3Q9Y4A8 694 aa12.86□□□□□ -0.35
PCDHGA9-202ENST00000616887 DDTLA6NHG4 134 aaPredicted RBP12.85□□□□□ -0.35
PCDHGA9-202ENST00000616887 RAD21O60216 631 aa12.85□□□□□ -0.35
PCDHGA9-202ENST00000616887 ACTN2P35609 894 aa12.85□□□□□ -0.35
PCDHGA9-202ENST00000616887 SLC16A2P36021 539 aa12.85□□□□□ -0.35
PCDHGA9-202ENST00000616887 DPYDQ12882 1025 aa12.85□□□□□ -0.35
PCDHGA9-202ENST00000616887 CFAP100Q494V2 611 aa12.85□□□□□ -0.35
PCDHGA9-202ENST00000616887 SPATA20Q8TB22 786 aa12.85□□□□□ -0.35
PCDHGA9-202ENST00000616887 LRRC15Q8TF66 581 aa12.85□□□□□ -0.35
PCDHGA9-202ENST00000616887 SPZ1Q9BXG8 430 aa12.85□□□□□ -0.35
PCDHGA9-202ENST00000616887 DEF6Q9H4E7 631 aa12.85□□□□□ -0.35
PCDHGA9-202ENST00000616887 SAMSN1Q9NSI8 373 aaKnown RBP12.85□□□□□ -0.35
PCDHGA9-202ENST00000616887 SMCO2A6NFE2 343 aa12.85□□□□□ -0.35
PCDHGA9-202ENST00000616887 MAGEA9P43362 315 aa12.85□□□□□ -0.35
PCDHGA9-202ENST00000616887 CCDC178Q5BJE1 867 aa12.85□□□□□ -0.35
PCDHGA9-202ENST00000616887 JAKMIP3Q5VZ66 844 aa12.85□□□□□ -0.35
PCDHGA9-202ENST00000616887 SH3RF1Q7Z6J0 888 aa12.85□□□□□ -0.35
PCDHGA9-202ENST00000616887 SH3GLB2Q9NR46 395 aa12.85□□□□□ -0.35
PCDHGA9-202ENST00000616887 BIN2Q9UBW5 565 aaPredicted RBP12.85□□□□□ -0.35
PCDHGA9-202ENST00000616887 TRAPPC10P48553 1259 aa12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 UBASH3AP57075 661 aa12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 CUL4BQ13620 913 aa12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 LETM2Q2VYF4 491 aa12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 DACT2Q5SW24 774 aa12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 EXOC4Q96A65 974 aa12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 PPP1R1BQ9UD71 204 aaPredicted RBP12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 DNAI1Q9UI46 699 aa12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 HOOK1Q9UJC3 728 aaKnown RBP12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 IGKV6D-41A0A0C4DH26 115 aa12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 ANKRD65E5RJM6 399 aa12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 ATP8B1O43520 1251 aa12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 NOVP48745 357 aa12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 GRIPAP1Q4V328 841 aa12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 CC2D2BQ6DHV5 1058 aa12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 CC2D1AQ6P1N0 951 aaPredicted RBP12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 PDXDC2PQ6P474 469 aa12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 FOXR1Q6PIV2 292 aa12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 LEKR1Q6ZMV7 388 aa12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 KCTD1Q719H9 257 aa12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 SH3BP5LQ7L8J4 393 aa12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 CCDC148Q8NFR7 591 aa12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 ZMYND12Q9H0C1 365 aa12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 KCND1Q9NSA2 647 aa12.84□□□□□ -0.35
PCDHGA9-202ENST00000616887 BMP15O95972 392 aa12.83□□□□□ -0.35
PCDHGA9-202ENST00000616887 PODNQ7Z5L7 613 aa12.83□□□□□ -0.35
PCDHGA9-202ENST00000616887 RRP36Q96EU6 259 aaKnown RBP12.83□□□□□ -0.35
PCDHGA9-202ENST00000616887 CARD6Q9BX69 1037 aa12.83□□□□□ -0.35
PCDHGA9-202ENST00000616887 FAM198AQ9UFP1 575 aa12.83□□□□□ -0.35
PCDHGA9-202ENST00000616887 SEC63Q9UGP8 760 aaKnown RBP12.83□□□□□ -0.35
PCDHGA9-202ENST00000616887 SUGT1Q9Y2Z0 365 aa12.83□□□□□ -0.35
PCDHGA9-202ENST00000616887 FOCADQ5VW36 1801 aa12.83□□□□□ -0.35
PCDHGA9-202ENST00000616887 EIF3CLB5ME19 914 aaKnown RBP12.83□□□□□ -0.36
PCDHGA9-202ENST00000616887 C21orf2O43822 256 aa12.83□□□□□ -0.36
PCDHGA9-202ENST00000616887 PPP1R11O60927 126 aaPredicted RBP12.83□□□□□ -0.36
PCDHGA9-202ENST00000616887 CCDC172P0C7W6 258 aa12.83□□□□□ -0.36
PCDHGA9-202ENST00000616887 ELOA2Q8IYF1 753 aaPredicted RBP12.83□□□□□ -0.36
PCDHGA9-202ENST00000616887 EIF3CQ99613 913 aaKnown RBP12.83□□□□□ -0.36
PCDHGA9-202ENST00000616887 MAPK8IP1Q9UQF2 711 aa12.83□□□□□ -0.36
PCDHGA9-202ENST00000616887 CEP83Q9Y592 693 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms