RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 DEFB128Q7Z7B8 93 aa20.99■□□□□ 0.95
TRAPPC3-209ENST00000616395 PRPF38AQ8NAV1 312 aaKnown RBP20.99■□□□□ 0.95
TRAPPC3-209ENST00000616395 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.99■□□□□ 0.955e-6■■■■■ 29.2
TRAPPC3-209ENST00000616395 BCL11AQ9H165 835 aa20.99■□□□□ 0.95
TRAPPC3-209ENST00000616395 ATP8A2Q9NTI2 1148 aa20.99■□□□□ 0.95
TRAPPC3-209ENST00000616395 GNEQ9Y223 722 aaKnown RBP20.99■□□□□ 0.95
TRAPPC3-209ENST00000616395 MCM3APO60318 1980 aa20.98■□□□□ 0.95
TRAPPC3-209ENST00000616395 USP17L12C9JPN9 530 aa20.98■□□□□ 0.95
TRAPPC3-209ENST00000616395 USP17L21D6R901 530 aa20.98■□□□□ 0.95
TRAPPC3-209ENST00000616395 ZBED4O75132 1171 aa20.98■□□□□ 0.95
TRAPPC3-209ENST00000616395 CNTN2Q02246 1040 aa20.98■□□□□ 0.95
TRAPPC3-209ENST00000616395 SLFNL1Q499Z3 407 aa20.98■□□□□ 0.95
TRAPPC3-209ENST00000616395 SEZ6LQ9BYH1 1024 aa20.98■□□□□ 0.95
TRAPPC3-209ENST00000616395 IL1RAPL2Q9NP60 686 aa20.98■□□□□ 0.95
TRAPPC3-209ENST00000616395 GOLIM4O00461 696 aa20.97■□□□□ 0.95
TRAPPC3-209ENST00000616395 DYNC1LI2O43237 492 aaPredicted RBP20.97■□□□□ 0.95
TRAPPC3-209ENST00000616395 MBD4O95243 580 aa20.97■□□□□ 0.95
TRAPPC3-209ENST00000616395 PFKMP08237 780 aa20.97■□□□□ 0.95
TRAPPC3-209ENST00000616395 MRE11P49959 708 aa20.97■□□□□ 0.95
TRAPPC3-209ENST00000616395 GRB10Q13322 594 aa20.97■□□□□ 0.95
TRAPPC3-209ENST00000616395 AP5M1Q9H0R1 490 aa20.97■□□□□ 0.95
TRAPPC3-209ENST00000616395 FBXO40Q9UH90 709 aa20.97■□□□□ 0.95
TRAPPC3-209ENST00000616395 CTDP1Q9Y5B0 961 aaPredicted RBP20.97■□□□□ 0.95
TRAPPC3-209ENST00000616395 PRR33A8MZF0 331 aa20.96■□□□□ 0.95
TRAPPC3-209ENST00000616395 F5H6K3 240 aa20.96■□□□□ 0.95
TRAPPC3-209ENST00000616395 NDUFB10O96000 172 aa20.96■□□□□ 0.95
TRAPPC3-209ENST00000616395 IGHDP01880 384 aa20.96■□□□□ 0.95
TRAPPC3-209ENST00000616395 CYP2C9P11712 490 aa20.96■□□□□ 0.95
TRAPPC3-209ENST00000616395 KLRC3Q07444 240 aa20.96■□□□□ 0.95
TRAPPC3-209ENST00000616395 AMOTL1Q8IY63 956 aa20.96■□□□□ 0.95
TRAPPC3-209ENST00000616395 KIFC2Q96AC6 838 aa20.96■□□□□ 0.95
TRAPPC3-209ENST00000616395 DNAJC2Q99543 621 aaKnown RBP20.96■□□□□ 0.95
TRAPPC3-209ENST00000616395 ALDH8A1Q9H2A2 487 aaPredicted RBP20.96■□□□□ 0.95
TRAPPC3-209ENST00000616395 SLC38A10Q9HBR0 1119 aa20.96■□□□□ 0.95
TRAPPC3-209ENST00000616395 ZEB2O60315 1214 aa20.95■□□□□ 0.94
TRAPPC3-209ENST00000616395 SMPD1P17405 629 aa20.95■□□□□ 0.94
TRAPPC3-209ENST00000616395 SPRED2Q7Z698 418 aa20.95■□□□□ 0.94
TRAPPC3-209ENST00000616395 CHST13Q8NET6 341 aa20.95■□□□□ 0.94
TRAPPC3-209ENST00000616395 SLC9A7Q96T83 725 aa20.95■□□□□ 0.94
TRAPPC3-209ENST00000616395 TRMT13Q9NUP7 481 aaKnown RBP20.95■□□□□ 0.94
TRAPPC3-209ENST00000616395 BAZ2AQ9UIF9 1905 aaKnown RBP20.94■□□□□ 0.94
TRAPPC3-209ENST00000616395 LPXNO60711 386 aa20.94■□□□□ 0.94
TRAPPC3-209ENST00000616395 ACTN1P12814 892 aa20.94■□□□□ 0.94
TRAPPC3-209ENST00000616395 HERC6Q8IVU3 1022 aa20.94■□□□□ 0.94
TRAPPC3-209ENST00000616395 FAM133AQ8N9E0 248 aa20.94■□□□□ 0.94
TRAPPC3-209ENST00000616395 PHOSPHO2Q8TCD6 241 aa20.94■□□□□ 0.94
TRAPPC3-209ENST00000616395 RHPN1Q8TCX5 695 aa20.94■□□□□ 0.94
TRAPPC3-209ENST00000616395 HOMER2Q9NSB8 354 aa20.94■□□□□ 0.94
TRAPPC3-209ENST00000616395 DDX49Q9Y6V7 483 aaKnown RBP20.94■□□□□ 0.94
TRAPPC3-209ENST00000616395 SOWAHBA6NEL2 793 aa20.93■□□□□ 0.94
TRAPPC3-209ENST00000616395 TMEM63BQ5T3F8 832 aa20.93■□□□□ 0.94
TRAPPC3-209ENST00000616395 ERC1Q8IUD2 1116 aa20.93■□□□□ 0.94
TRAPPC3-209ENST00000616395 SNX27Q96L92 541 aa20.93■□□□□ 0.94
TRAPPC3-209ENST00000616395 UIMC1Q96RL1 719 aa20.93■□□□□ 0.94
TRAPPC3-209ENST00000616395 PDGFCQ9NRA1 345 aa20.93■□□□□ 0.94
TRAPPC3-209ENST00000616395 CTR9Q6PD62 1173 aa20.92■□□□□ 0.94
TRAPPC3-209ENST00000616395 NYAP2Q9P242 653 aa20.92■□□□□ 0.94
TRAPPC3-209ENST00000616395 TNKSO95271 1327 aa20.92■□□□□ 0.94
TRAPPC3-209ENST00000616395 KIF28PB7ZC32 967 aa20.91■□□□□ 0.94
TRAPPC3-209ENST00000616395 SUPT20HL2P0C7V6 817 aa20.91■□□□□ 0.94
TRAPPC3-209ENST00000616395 ADD2P35612 726 aa20.91■□□□□ 0.94
TRAPPC3-209ENST00000616395 OAZ1P54368 228 aa20.91■□□□□ 0.94
TRAPPC3-209ENST00000616395 GJD3Q8N144 294 aa20.91■□□□□ 0.94
TRAPPC3-209ENST00000616395 DDRGK1Q96HY6 314 aa20.91■□□□□ 0.94
TRAPPC3-209ENST00000616395 ASB14A6NK59 587 aa20.9■□□□□ 0.94
TRAPPC3-209ENST00000616395 CHGBP05060 677 aa20.9■□□□□ 0.94
TRAPPC3-209ENST00000616395 NHLH1Q02575 133 aa20.9■□□□□ 0.94
TRAPPC3-209ENST00000616395 HSP90AB4PQ58FF6 505 aa20.9■□□□□ 0.94
TRAPPC3-209ENST00000616395 IQSEC1Q6DN90 963 aa20.9■□□□□ 0.94
TRAPPC3-209ENST00000616395 SMC5Q8IY18 1101 aa20.9■□□□□ 0.94
TRAPPC3-209ENST00000616395 A1CFQ9NQ94 594 aaKnown RBP20.9■□□□□ 0.94
TRAPPC3-209ENST00000616395 Q9Y3F1 56 aa20.9■□□□□ 0.94
TRAPPC3-209ENST00000616395 COL4A4P53420 1690 aaPredicted RBP20.9■□□□□ 0.94
TRAPPC3-209ENST00000616395 GREB1LQ9C091 1923 aaPredicted RBP20.89■□□□□ 0.94
TRAPPC3-209ENST00000616395 RASA1P20936 1047 aa20.89■□□□□ 0.93
TRAPPC3-209ENST00000616395 RFC2P35250 354 aa20.89■□□□□ 0.93
TRAPPC3-209ENST00000616395 TAPT1Q6NXT6 567 aa20.89■□□□□ 0.93
TRAPPC3-209ENST00000616395 EEPD1Q7L9B9 569 aa20.89■□□□□ 0.93
TRAPPC3-209ENST00000616395 FBXO16Q8IX29 292 aaPredicted RBP20.89■□□□□ 0.93
TRAPPC3-209ENST00000616395 FAM178BQ8IXR5 827 aa20.89■□□□□ 0.93
TRAPPC3-209ENST00000616395 GDPD5Q8WTR4 605 aa20.89■□□□□ 0.93
TRAPPC3-209ENST00000616395 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.89■□□□□ 0.93
TRAPPC3-209ENST00000616395 KIF1BPQ96EK5 621 aa20.89■□□□□ 0.93
TRAPPC3-209ENST00000616395 FTOQ9C0B1 505 aaKnown RBP eCLIP20.89■□□□□ 0.935e-6■■■□□ 14.7
TRAPPC3-209ENST00000616395 ACAD9Q9H845 621 aa20.89■□□□□ 0.93
TRAPPC3-209ENST00000616395 CLIP2Q9UDT6 1046 aa20.89■□□□□ 0.93
TRAPPC3-209ENST00000616395 FEM1BQ9UK73 627 aa20.89■□□□□ 0.93
TRAPPC3-209ENST00000616395 SLC4A4Q9Y6R1 1079 aa20.89■□□□□ 0.93
TRAPPC3-209ENST00000616395 SCN5AQ14524 2016 aa20.89■□□□□ 0.93
TRAPPC3-209ENST00000616395 SMARCA5O60264 1052 aaPredicted RBP20.88■□□□□ 0.93
TRAPPC3-209ENST00000616395 STK11IPQ8N1F8 1099 aa20.88■□□□□ 0.93
TRAPPC3-209ENST00000616395 UBE2ZQ9H832 354 aaPredicted RBP20.88■□□□□ 0.93
TRAPPC3-209ENST00000616395 LCHNA4D1U4 455 aa20.87■□□□□ 0.93
TRAPPC3-209ENST00000616395 IQCF3P0C7M6 154 aa20.87■□□□□ 0.93
TRAPPC3-209ENST00000616395 SSTR3P32745 418 aaPredicted RBP20.87■□□□□ 0.93
TRAPPC3-209ENST00000616395 RNF146Q9NTX7 359 aa20.87■□□□□ 0.93
TRAPPC3-209ENST00000616395 LMCD1Q9NZU5 365 aa20.87■□□□□ 0.93
TRAPPC3-209ENST00000616395 ALADP13716 330 aa20.86■□□□□ 0.93
TRAPPC3-209ENST00000616395 CSPP1Q1MSJ5 1256 aa20.86■□□□□ 0.93
TRAPPC3-209ENST00000616395 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms