RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 SLC10A5Q5PT55 438 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 SND1Q7KZF4 910 aaKnown RBP eCLIP6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 NBPF11Q86T75 865 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 SH3RF3Q8TEJ3 882 aaPredicted RBP6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 AMNQ9BXJ7 453 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 NDST4Q9H3R1 872 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 LGALS16A8MUM7 142 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 RNASE9P60153 205 aaKnown RBP6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 ICA1Q05084 483 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 SMCR8Q8TEV9 937 aaPredicted RBP6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 ANKRD7Q92527 254 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 KANSL2Q9H9L4 492 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 VEZTQ9HBM0 779 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 ADAMTS1Q9UHI8 967 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 DNM3Q9UQ16 869 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 PCDHB13Q9Y5F0 798 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 FRMPD2Q68DX3 1309 aaPredicted RBP6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 POTEMA6NI47 508 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 SEC31AO94979 1220 aaKnown RBP6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 DCAF17Q5H9S7 520 aaPredicted RBP6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 TOGARAM2Q6ZUX3 1019 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 C3orf67Q6ZVT6 689 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 KRT26Q7Z3Y9 468 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 ADSSL1Q8N142 457 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 TRIM58Q8NG06 486 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 DNAJC5Q9H3Z4 198 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 STK17AQ9UEE5 414 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 ANAPC4Q9UJX5 808 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 KIAA1024Q9UPX6 916 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 GOLGA4Q13439 2230 aaKnown RBP6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 DCCP43146 1447 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 ERLIN2O94905 339 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 ZNF18P17022 549 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 TNIP1Q15025 636 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 KIAA0753Q2KHM9 967 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 EARS2Q5JPH6 523 aaKnown RBP6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 CLEC10AQ8IUN9 316 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 MAP10Q9P2G4 905 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 BCL9O00512 1426 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 FAM237AA0A1B0GTK4 181 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 PABPC4Q13310 644 aaKnown RBP eCLIP6.25□□□□□ -1.415e-22■□□□□ 8.7
SYNCRIP-204ENST00000616122 PRR16Q569H4 304 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 DNAJC21Q5F1R6 531 aaKnown RBP6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 CFAP58Q5T655 872 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 GJA10Q969M2 543 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 CHP1Q99653 195 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 FAM107BQ9H098 131 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 URB1O60287 2271 aaKnown RBP6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 ATP8B1O43520 1251 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 GCFC2P16383 781 aaKnown RBP6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 CACNB3P54284 484 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 ASPRV1Q53RT3 343 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 C8orf74Q6P047 294 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 CPXCR1Q8N123 301 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 MAP3K14Q99558 947 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 NAP1L4Q99733 375 aaKnown RBP6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 BARHL2Q9NY43 387 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 RSPH14Q9UHP6 348 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 MYO6Q9UM54 1294 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 RICTORQ6R327 1708 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 SPATA31A1Q5TZJ5 1347 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 ZSCAN20P17040 1043 aaPredicted RBP6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 RASA1P20936 1047 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 ADAM9Q13443 819 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 NR1I3Q14994 352 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 PKN1Q16512 942 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 MAN2A1Q16706 1144 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 RCSD1Q6JBY9 416 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 GUF1Q8N442 669 aaKnown RBP6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 IQCDQ96DY2 449 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 NOX5Q96PH1 765 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 MRPL44Q9H9J2 332 aaKnown RBP6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 USP17L15C9J2P7 530 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 USP17L13C9JLJ4 530 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 USP17L11C9JVI0 530 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 USP17L18D6R9N7 530 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 USP17L22D6RA61 530 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 USP17L17D6RBQ6 530 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 USP17L19D6RCP7 530 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 USP17L20D6RJB6 530 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 USP17L24Q0WX57 530 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 ZYXQ15942 572 aaKnown RBP6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 TCP11X2Q5H9J9 407 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 USP17L6PQ6QN14 398 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 IFT81Q8WYA0 676 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 SPZ1Q9BXG8 430 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 LARSQ9P2J5 1176 aaKnown RBP6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 PARP3Q9Y6F1 533 aa6.25□□□□□ -1.41
SYNCRIP-204ENST00000616122 FAM196BA6NMK8 535 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 FAM13AO94988 1023 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 GPBP1Q86WP2 473 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 PVALEFA0A1B0GWK0 134 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 CHMP2AO43633 222 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 FOSP01100 380 aaPredicted RBP6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 H2AFZP0C0S5 128 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 NCAPH2Q6IBW4 605 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 CC2D1AQ6P1N0 951 aaPredicted RBP6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 AEBP2Q6ZN18 517 aaPredicted RBP6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 H2AFVQ71UI9 128 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 REXO1L1PQ8IX06 675 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms