RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 PANK4Q9NVE7 773 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 PCDHA7Q9UN72 937 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 MYZAPP0CAP1 466 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 AP3B2Q13367 1082 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 ASIC2Q16515 512 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 RCSD1Q6JBY9 416 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 RASGRP4Q8TDF6 673 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 GOLGA1Q92805 767 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 GSG1L2A8MUP6 293 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 LPXNO60711 386 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 PRPF6O94906 941 aaKnown RBP10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 FDX1P10109 184 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 BCRP11274 1271 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 GJC1P36383 396 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 KIF23Q02241 960 aaPredicted RBP10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 CYP4A11Q02928 519 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 PNOCQ13519 176 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 RSBN1LQ6PCB5 846 aaPredicted RBP10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 KRBA2Q6ZNG9 492 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 SYMPKQ92797 1274 aaKnown RBP10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 POLR3EQ9NVU0 708 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 KIAA1468Q9P260 1216 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 RASAL2Q9UJF2 1139 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 ZHX1Q9UKY1 873 aaPredicted RBP10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 DAGLAQ9Y4D2 1042 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 PALM3A6NDB9 673 aaPredicted RBP10.46□□□□□ -0.73
CLTCL1-208ENST00000615606 TMEM110-MUSTN1A8MSY1 372 aa10.46□□□□□ -0.73
CLTCL1-208ENST00000615606 KRT19P08727 400 aa10.46□□□□□ -0.73
CLTCL1-208ENST00000615606 TNNI1P19237 187 aa10.46□□□□□ -0.73
CLTCL1-208ENST00000615606 SCARF1Q14162 830 aa10.46□□□□□ -0.73
CLTCL1-208ENST00000615606 LIN9Q5TKA1 542 aa10.46□□□□□ -0.73
CLTCL1-208ENST00000615606 HHIPL2Q6UWX4 724 aa10.46□□□□□ -0.73
CLTCL1-208ENST00000615606 KIF20BQ96Q89 1820 aa10.46□□□□□ -0.73
CLTCL1-208ENST00000615606 ORC4O43929 436 aa10.46□□□□□ -0.73
CLTCL1-208ENST00000615606 RPS12P25398 132 aaKnown RBP10.46□□□□□ -0.73
CLTCL1-208ENST00000615606 FAM83BQ5T0W9 1011 aa10.46□□□□□ -0.73
CLTCL1-208ENST00000615606 RETREG2Q8NC44 543 aa10.46□□□□□ -0.73
CLTCL1-208ENST00000615606 SLC7A3Q8WY07 619 aa10.46□□□□□ -0.73
CLTCL1-208ENST00000615606 KIAA1024Q9UPX6 916 aa10.46□□□□□ -0.73
CLTCL1-208ENST00000615606 CLIC4Q9Y696 253 aa10.46□□□□□ -0.73
CLTCL1-208ENST00000615606 NEDD4P46934 1319 aa10.46□□□□□ -0.73
CLTCL1-208ENST00000615606 ZBTB5O15062 677 aa10.46□□□□□ -0.74
CLTCL1-208ENST00000615606 ENTPD3O75355 529 aa10.46□□□□□ -0.74
CLTCL1-208ENST00000615606 FAM26FQ5R3K3 315 aa10.46□□□□□ -0.74
CLTCL1-208ENST00000615606 RNF207Q6ZRF8 634 aa10.46□□□□□ -0.74
CLTCL1-208ENST00000615606 FBXO41Q8TF61 875 aa10.46□□□□□ -0.74
CLTCL1-208ENST00000615606 BAG1Q99933 345 aaPredicted RBP10.46□□□□□ -0.74
CLTCL1-208ENST00000615606 SEPT9Q9UHD8 586 aaPredicted RBP10.46□□□□□ -0.74
CLTCL1-208ENST00000615606 HACL1Q9UJ83 578 aa10.46□□□□□ -0.74
CLTCL1-208ENST00000615606 CTAGE9A4FU28 777 aa10.46□□□□□ -0.74
CLTCL1-208ENST00000615606 RGL2O15211 777 aa10.46□□□□□ -0.74
CLTCL1-208ENST00000615606 NR1I2O75469 434 aa10.46□□□□□ -0.74
CLTCL1-208ENST00000615606 SLC10A5Q5PT55 438 aa10.46□□□□□ -0.74
CLTCL1-208ENST00000615606 TTC16Q8NEE8 873 aa10.46□□□□□ -0.74
CLTCL1-208ENST00000615606 TAB2Q9NYJ8 693 aa10.46□□□□□ -0.74
CLTCL1-208ENST00000615606 DNAI1Q9UI46 699 aa10.46□□□□□ -0.74
CLTCL1-208ENST00000615606 LRRIQ4A6NIV6 560 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 N4BP1O75113 896 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 YARSP54577 528 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 SLFNL1Q499Z3 407 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 FBXO33Q7Z6M2 555 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 NEDD1Q8NHV4 660 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 CEP95Q96GE4 821 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 NACC1Q96RE7 527 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 SRRTQ9BXP5 876 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 ANO3Q9BYT9 981 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 CBX8Q9HC52 389 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 CTAGE15A4D2H0 777 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 CTAGE8P0CG41 777 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 COPB2P35606 906 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 IGBP1P78318 339 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 SPP2Q13103 211 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 SPOUT1Q5T280 376 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 PPP1R18Q6NYC8 613 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 CTAGE6Q86UF2 777 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 CCDC50Q8IVM0 306 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 CTAGE4Q8IX94 777 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 SLC44A5Q8NCS7 719 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 NUCKS1Q9H1E3 243 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 FAM196BA6NMK8 535 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 XRCC5P13010 732 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 SLC9C1Q4G0N8 1177 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 LARP4BQ92615 738 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 CLIC6Q96NY7 704 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 CCDC113Q9H0I3 377 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 ZNF215Q9UL58 517 aaPredicted RBP10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 GUCA1BQ9UMX6 200 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 C3P01024 1663 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 PLEKHA8P1O95397 391 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 XRCC6P12956 609 aaKnown RBP eCLIP10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 GAP43P17677 238 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 ABCD1P33897 745 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 CYP2J2P51589 502 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 TGFB2P61812 414 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 PGBD1Q96JS3 809 aa10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 OSBPL5Q9H0X9 879 aaPredicted RBP10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.45□□□□□ -0.74
CLTCL1-208ENST00000615606 KDM6AO15550 1401 aaPredicted RBP10.44□□□□□ -0.74
CLTCL1-208ENST00000615606 ABCB11O95342 1321 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms