RNA–Protein interactions for RNA: ENST00000615505.4

SURF1-205, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 1 (best) BASIC

Gene SURF1, Length 991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-205ENST00000615505 CYP39A1Q9NYL5 469 aa29.49■■■□□ 2.31
SURF1-205ENST00000615505 SNX14Q9Y5W7 946 aa29.49■■■□□ 2.31
SURF1-205ENST00000615505 SLC12A7Q9Y666 1083 aa29.49■■■□□ 2.31
SURF1-205ENST00000615505 SYNGAP1Q96PV0 1343 aa29.48■■■□□ 2.31
SURF1-205ENST00000615505 CALM1P0DP23 149 aa29.48■■■□□ 2.31
SURF1-205ENST00000615505 CALM2P0DP24 149 aa29.48■■■□□ 2.31
SURF1-205ENST00000615505 CALM3P0DP25 149 aa29.48■■■□□ 2.31
SURF1-205ENST00000615505 QRICH1Q2TAL8 776 aa29.48■■■□□ 2.31
SURF1-205ENST00000615505 PRAMEF19Q5SWL8 479 aa29.48■■■□□ 2.31
SURF1-205ENST00000615505 FBXO11Q86XK2 927 aa29.48■■■□□ 2.31
SURF1-205ENST00000615505 FAM133AQ8N9E0 248 aa29.48■■■□□ 2.31
SURF1-205ENST00000615505 MYL10Q9BUA6 226 aa29.48■■■□□ 2.31
SURF1-205ENST00000615505 DDX20Q9UHI6 824 aaKnown RBP29.48■■■□□ 2.31
SURF1-205ENST00000615505 CNPY2Q9Y2B0 182 aa29.48■■■□□ 2.31
SURF1-205ENST00000615505 NFIBO00712 420 aa29.47■■■□□ 2.31
SURF1-205ENST00000615505 FARP2O94887 1054 aaPredicted RBP29.47■■■□□ 2.31
SURF1-205ENST00000615505 CNTN2Q02246 1040 aa29.47■■■□□ 2.31
SURF1-205ENST00000615505 SYNE3Q6ZMZ3 975 aa29.47■■■□□ 2.31
SURF1-205ENST00000615505 SGMS1Q86VZ5 419 aa29.47■■■□□ 2.31
SURF1-205ENST00000615505 ANKLE1Q8NAG6 615 aa29.47■■■□□ 2.31
SURF1-205ENST00000615505 CLEC4DQ8WXI8 215 aa29.47■■■□□ 2.31
SURF1-205ENST00000615505 USP26Q9BXU7 913 aa29.47■■■□□ 2.31
SURF1-205ENST00000615505 RIOX1Q9H6W3 641 aa29.47■■■□□ 2.31
SURF1-205ENST00000615505 OGDHLQ9ULD0 1010 aa29.47■■■□□ 2.31
SURF1-205ENST00000615505 ABCB11O95342 1321 aa29.46■■■□□ 2.31
SURF1-205ENST00000615505 PTPDC1A2A3K4 754 aa29.46■■■□□ 2.31
SURF1-205ENST00000615505 SEPT4O43236 478 aa29.46■■■□□ 2.31
SURF1-205ENST00000615505 LHX8Q68G74 356 aa29.46■■■□□ 2.31
SURF1-205ENST00000615505 JAKMIP1Q96N16 626 aaKnown RBP29.46■■■□□ 2.31
SURF1-205ENST00000615505 ZBTB5O15062 677 aa29.45■■■□□ 2.31
SURF1-205ENST00000615505 PSMA5P28066 241 aa29.45■■■□□ 2.31
SURF1-205ENST00000615505 GNAQP50148 359 aa29.45■■■□□ 2.31
SURF1-205ENST00000615505 BAATQ14032 418 aaPredicted RBP29.45■■■□□ 2.31
SURF1-205ENST00000615505 RNF207Q6ZRF8 634 aa29.45■■■□□ 2.31
SURF1-205ENST00000615505 MTMR8Q96EF0 704 aa29.45■■■□□ 2.31
SURF1-205ENST00000615505 TCEANC2Q96MN5 208 aa29.45■■■□□ 2.31
SURF1-205ENST00000615505 LZTS2Q9BRK4 669 aa29.45■■■□□ 2.31
SURF1-205ENST00000615505 AMNQ9BXJ7 453 aa29.45■■■□□ 2.31
SURF1-205ENST00000615505 BRCA2P51587 3418 aa29.45■■■□□ 2.3
SURF1-205ENST00000615505 SMCHD1A6NHR9 2005 aa29.44■■■□□ 2.3
SURF1-205ENST00000615505 ASB14A6NK59 587 aa29.44■■■□□ 2.3
SURF1-205ENST00000615505 EIF5BO60841 1220 aaKnown RBP29.44■■■□□ 2.3
SURF1-205ENST00000615505 FGD1P98174 961 aa29.44■■■□□ 2.3
SURF1-205ENST00000615505 TRAF1Q13077 416 aa29.44■■■□□ 2.3
SURF1-205ENST00000615505 BLOC1S2Q6QNY1 142 aa29.44■■■□□ 2.3
SURF1-205ENST00000615505 RGS22Q8NE09 1264 aa29.44■■■□□ 2.3
SURF1-205ENST00000615505 FGD4Q96M96 766 aa29.44■■■□□ 2.3
SURF1-205ENST00000615505 MAF1Q9H063 256 aa29.44■■■□□ 2.3
SURF1-205ENST00000615505 ADD3Q9UEY8 706 aaKnown RBP29.44■■■□□ 2.3
SURF1-205ENST00000615505 MRPL11Q9Y3B7 192 aaKnown RBP29.44■■■□□ 2.3
SURF1-205ENST00000615505 SOWAHBA6NEL2 793 aa29.43■■■□□ 2.3
SURF1-205ENST00000615505 SNAI1O95863 264 aaPredicted RBP29.43■■■□□ 2.3
SURF1-205ENST00000615505 ARMCX2Q7L311 632 aa29.43■■■□□ 2.3
SURF1-205ENST00000615505 UBE2Q1Q7Z7E8 422 aa29.43■■■□□ 2.3
SURF1-205ENST00000615505 HOMER1Q86YM7 354 aa29.43■■■□□ 2.3
SURF1-205ENST00000615505 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.43■■■□□ 2.3
SURF1-205ENST00000615505 SMARCA1P28370 1054 aa29.42■■■□□ 2.3
SURF1-205ENST00000615505 MCF2L2Q86YR7 1114 aa29.42■■■□□ 2.3
SURF1-205ENST00000615505 CCDC144CPQ8IYA2 1237 aa29.42■■■□□ 2.3
SURF1-205ENST00000615505 PIGSQ96S52 555 aa29.42■■■□□ 2.3
SURF1-205ENST00000615505 ABHD16BQ9H3Z7 469 aa29.42■■■□□ 2.3
SURF1-205ENST00000615505 CYTH3O43739 400 aa29.41■■■□□ 2.3
SURF1-205ENST00000615505 ZNF865P0CJ78 1059 aaPredicted RBP29.41■■■□□ 2.3
SURF1-205ENST00000615505 CALML3P27482 149 aa29.41■■■□□ 2.3
SURF1-205ENST00000615505 RPS6P62753 249 aaKnown RBP29.41■■■□□ 2.3
SURF1-205ENST00000615505 SLC35G1Q2M3R5 365 aa29.41■■■□□ 2.3
SURF1-205ENST00000615505 PNMA6FA0A0J9YX94 578 aa29.4■■■□□ 2.3
SURF1-205ENST00000615505 RXRAP19793 462 aa29.4■■■□□ 2.3
SURF1-205ENST00000615505 NECAB2Q7Z6G3 386 aa29.4■■■□□ 2.3
SURF1-205ENST00000615505 MICU3Q86XE3 530 aa29.4■■■□□ 2.3
SURF1-205ENST00000615505 FANCBQ8NB91 859 aa29.4■■■□□ 2.3
SURF1-205ENST00000615505 PAWRQ96IZ0 340 aaKnown RBP29.4■■■□□ 2.3
SURF1-205ENST00000615505 SPZ1Q9BXG8 430 aa29.4■■■□□ 2.3
SURF1-205ENST00000615505 ZHX1Q9UKY1 873 aaPredicted RBP29.4■■■□□ 2.3
SURF1-205ENST00000615505 PCDHA1Q9Y5I3 950 aa29.4■■■□□ 2.3
SURF1-205ENST00000615505 AKR1A1P14550 325 aa29.39■■■□□ 2.3
SURF1-205ENST00000615505 CPA1P15085 419 aa29.39■■■□□ 2.3
SURF1-205ENST00000615505 CASTP20810 708 aaKnown RBP29.39■■■□□ 2.3
SURF1-205ENST00000615505 ACVR2BQ13705 512 aa29.39■■■□□ 2.3
SURF1-205ENST00000615505 APOA5Q6Q788 366 aa29.39■■■□□ 2.3
SURF1-205ENST00000615505 SLC30A10Q6XR72 485 aa29.39■■■□□ 2.3
SURF1-205ENST00000615505 RAB11FIP4Q86YS3 637 aa29.39■■■□□ 2.3
SURF1-205ENST00000615505 FAM184BQ9ULE4 1060 aa29.39■■■□□ 2.3
SURF1-205ENST00000615505 LOC102724159A0A0B4J2E5 919 aa29.38■■■□□ 2.29
SURF1-205ENST00000615505 RPS6KB1P23443 525 aa29.38■■■□□ 2.29
SURF1-205ENST00000615505 PWP2Q15269 919 aaKnown RBP29.38■■■□□ 2.29
SURF1-205ENST00000615505 ANO1Q5XXA6 986 aa29.38■■■□□ 2.29
SURF1-205ENST00000615505 Q6ZUG5 572 aa29.38■■■□□ 2.29
SURF1-205ENST00000615505 RRP36Q96EU6 259 aaKnown RBP29.38■■■□□ 2.29
SURF1-205ENST00000615505 PURBQ96QR8 312 aaKnown RBP29.38■■■□□ 2.29
SURF1-205ENST00000615505 MPHOSPH6Q99547 160 aaKnown RBP29.38■■■□□ 2.29
SURF1-205ENST00000615505 HTATIP2Q9BUP3 242 aa29.38■■■□□ 2.29
SURF1-205ENST00000615505 MYH6P13533 1939 aa29.37■■■□□ 2.29
SURF1-205ENST00000615505 ZBTB43O43298 467 aa29.37■■■□□ 2.29
SURF1-205ENST00000615505 PPP1R11O60927 126 aaPredicted RBP29.37■■■□□ 2.29
SURF1-205ENST00000615505 RARBP10826 455 aa29.37■■■□□ 2.29
SURF1-205ENST00000615505 ARRDC4Q8NCT1 418 aa29.37■■■□□ 2.29
SURF1-205ENST00000615505 DNERQ8NFT8 737 aa29.37■■■□□ 2.29
SURF1-205ENST00000615505 DIS3LQ8TF46 1054 aaKnown RBP29.37■■■□□ 2.29
SURF1-205ENST00000615505 BRPF3Q9ULD4 1205 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms