RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 HOXC10Q9NYD6 342 aa10.5□□□□□ -0.73
MMP28-205ENST00000615317 RBPJLQ9UBG7 517 aa10.5□□□□□ -0.73
MMP28-205ENST00000615317 DAXXQ9UER7 740 aaPredicted RBP10.5□□□□□ -0.73
MMP28-205ENST00000615317 RABGAP1Q9Y3P9 1069 aa10.5□□□□□ -0.73
MMP28-205ENST00000615317 PCDHA1Q9Y5I3 950 aa10.5□□□□□ -0.73
MMP28-205ENST00000615317 ABCB11O95342 1321 aa10.5□□□□□ -0.73
MMP28-205ENST00000615317 VPS37CA5D8V6 355 aaPredicted RBP10.49□□□□□ -0.73
MMP28-205ENST00000615317 CA12O43570 354 aa10.49□□□□□ -0.73
MMP28-205ENST00000615317 TLR2O60603 784 aa10.49□□□□□ -0.73
MMP28-205ENST00000615317 TBC1D8O95759 1140 aa10.49□□□□□ -0.73
MMP28-205ENST00000615317 FDX1P10109 184 aa10.49□□□□□ -0.73
MMP28-205ENST00000615317 BCRP11274 1271 aa10.49□□□□□ -0.73
MMP28-205ENST00000615317 STAT3P40763 770 aa10.49□□□□□ -0.73
MMP28-205ENST00000615317 MUM1L1Q5H9M0 696 aa10.49□□□□□ -0.73
MMP28-205ENST00000615317 SLC30A10Q6XR72 485 aa10.49□□□□□ -0.73
MMP28-205ENST00000615317 NCAPG2Q86XI2 1143 aa10.49□□□□□ -0.73
MMP28-205ENST00000615317 REM2Q8IYK8 340 aaPredicted RBP10.49□□□□□ -0.73
MMP28-205ENST00000615317 PORCNQ9H237 461 aa10.49□□□□□ -0.73
MMP28-205ENST00000615317 R3HDMLQ9H3Y0 253 aa10.49□□□□□ -0.73
MMP28-205ENST00000615317 RNF186Q9NXI6 227 aa10.49□□□□□ -0.73
MMP28-205ENST00000615317 MORF4L1Q9UBU8 362 aa10.49□□□□□ -0.73
MMP28-205ENST00000615317 TSKSQ9UJT2 592 aa10.49□□□□□ -0.73
MMP28-205ENST00000615317 KCNJ14Q9UNX9 436 aa10.49□□□□□ -0.73
MMP28-205ENST00000615317 KIF3AQ9Y496 699 aa10.49□□□□□ -0.73
MMP28-205ENST00000615317 RIPK3Q9Y572 518 aa10.49□□□□□ -0.73
MMP28-205ENST00000615317 OPLAHO14841 1288 aa10.48□□□□□ -0.73
MMP28-205ENST00000615317 ATP2A1O14983 1001 aa10.48□□□□□ -0.73
MMP28-205ENST00000615317 TRPA1O75762 1119 aa10.48□□□□□ -0.73
MMP28-205ENST00000615317 ERCC3P19447 782 aa10.48□□□□□ -0.73
MMP28-205ENST00000615317 ADCY7P51828 1080 aa10.48□□□□□ -0.73
MMP28-205ENST00000615317 TRIM29Q14134 588 aa10.48□□□□□ -0.73
MMP28-205ENST00000615317 UBE2SQ16763 222 aa10.48□□□□□ -0.73
MMP28-205ENST00000615317 KRT40Q6A162 431 aa10.48□□□□□ -0.73
MMP28-205ENST00000615317 NSMFQ6X4W1 530 aa10.48□□□□□ -0.73
MMP28-205ENST00000615317 RIOX2Q8IUF8 465 aa10.48□□□□□ -0.73
MMP28-205ENST00000615317 GPRC5AQ8NFJ5 357 aa10.48□□□□□ -0.73
MMP28-205ENST00000615317 CCDC12Q8WUD4 166 aaPredicted RBP10.48□□□□□ -0.73
MMP28-205ENST00000615317 IPO9Q96P70 1041 aaKnown RBP10.48□□□□□ -0.73
MMP28-205ENST00000615317 TRERF1Q96PN7 1200 aa10.48□□□□□ -0.73
MMP28-205ENST00000615317 ACAD9Q9H845 621 aa10.48□□□□□ -0.73
MMP28-205ENST00000615317 EFCC1Q9HA90 598 aa10.48□□□□□ -0.73
MMP28-205ENST00000615317 CWC22Q9HCG8 908 aaKnown RBP10.48□□□□□ -0.73
MMP28-205ENST00000615317 KIAA1217Q5T5P2 1943 aa10.47□□□□□ -0.73
MMP28-205ENST00000615317 H3BQV1 296 aa10.47□□□□□ -0.73
MMP28-205ENST00000615317 ADAMTS3O15072 1205 aa10.47□□□□□ -0.73
MMP28-205ENST00000615317 XBP1P17861 261 aa10.47□□□□□ -0.73
MMP28-205ENST00000615317 HOXA13P31271 388 aaPredicted RBP10.47□□□□□ -0.73
MMP28-205ENST00000615317 NLRP5P59047 1200 aa10.47□□□□□ -0.73
MMP28-205ENST00000615317 CCNA1P78396 465 aa10.47□□□□□ -0.73
MMP28-205ENST00000615317 PKP1Q13835 747 aa10.47□□□□□ -0.73
MMP28-205ENST00000615317 Q3C1V9 767 aa10.47□□□□□ -0.73
MMP28-205ENST00000615317 IFFO2Q5TF58 517 aa10.47□□□□□ -0.73
MMP28-205ENST00000615317 C17orf99Q6UX52 265 aa10.47□□□□□ -0.73
MMP28-205ENST00000615317 CCAR1Q8IX12 1150 aaKnown RBP10.47□□□□□ -0.73
MMP28-205ENST00000615317 RASGRP4Q8TDF6 673 aa10.47□□□□□ -0.73
MMP28-205ENST00000615317 CLEC4DQ8WXI8 215 aa10.47□□□□□ -0.73
MMP28-205ENST00000615317 CUL5Q93034 780 aa10.47□□□□□ -0.73
MMP28-205ENST00000615317 PGBD1Q96JS3 809 aa10.47□□□□□ -0.73
MMP28-205ENST00000615317 SAGE1Q9NXZ1 904 aa10.47□□□□□ -0.73
MMP28-205ENST00000615317 PNMA2Q9UL42 364 aa10.47□□□□□ -0.73
MMP28-205ENST00000615317 MRPL11Q9Y3B7 192 aaKnown RBP10.47□□□□□ -0.73
MMP28-205ENST00000615317 DOCK5Q9H7D0 1870 aa10.47□□□□□ -0.73
MMP28-205ENST00000615317 ESYT2A0FGR8 921 aa10.46□□□□□ -0.73
MMP28-205ENST00000615317 SMCO2A6NFE2 343 aa10.46□□□□□ -0.73
MMP28-205ENST00000615317 KIF28PB7ZC32 967 aa10.46□□□□□ -0.73
MMP28-205ENST00000615317 CFBP00751 764 aa10.46□□□□□ -0.73
MMP28-205ENST00000615317 MMP1P03956 469 aa10.46□□□□□ -0.73
MMP28-205ENST00000615317 CALML3P27482 149 aa10.46□□□□□ -0.73
MMP28-205ENST00000615317 COPB2P35606 906 aa10.46□□□□□ -0.73
MMP28-205ENST00000615317 KRT2P35908 639 aa10.46□□□□□ -0.73
MMP28-205ENST00000615317 MAP2K1Q02750 393 aaPredicted RBP10.46□□□□□ -0.73
MMP28-205ENST00000615317 TRAF1Q13077 416 aa10.46□□□□□ -0.73
MMP28-205ENST00000615317 NPY5RQ15761 445 aa10.46□□□□□ -0.73
MMP28-205ENST00000615317 TKFCQ3LXA3 575 aa10.46□□□□□ -0.73
MMP28-205ENST00000615317 FOXD4L5Q5VV16 416 aaPredicted RBP10.46□□□□□ -0.73
MMP28-205ENST00000615317 LARP1BQ659C4 914 aaKnown RBP10.46□□□□□ -0.73
MMP28-205ENST00000615317 GPR142Q7Z601 462 aa10.46□□□□□ -0.73
MMP28-205ENST00000615317 DIS3L2Q8IYB7 885 aaKnown RBP10.46□□□□□ -0.73
MMP28-205ENST00000615317 REXO1Q8N1G1 1221 aaKnown RBP10.46□□□□□ -0.73
MMP28-205ENST00000615317 SHCBP1Q8NEM2 672 aa10.46□□□□□ -0.73
MMP28-205ENST00000615317 CHST13Q8NET6 341 aa10.46□□□□□ -0.73
MMP28-205ENST00000615317 OXER1Q8TDS5 423 aa10.46□□□□□ -0.73
MMP28-205ENST00000615317 FOXD4L4Q8WXT5 416 aaPredicted RBP10.46□□□□□ -0.73
MMP28-205ENST00000615317 BEGAINQ9BUH8 593 aa10.46□□□□□ -0.73
MMP28-205ENST00000615317 PHF20Q9BVI0 1012 aa10.46□□□□□ -0.73
MMP28-205ENST00000615317 ARHGAP39Q9C0H5 1083 aa10.46□□□□□ -0.73
MMP28-205ENST00000615317 BRMS1Q9HCU9 246 aa10.46□□□□□ -0.73
MMP28-205ENST00000615317 C6orf50Q9HD87 102 aa10.46□□□□□ -0.73
MMP28-205ENST00000615317 A1CFQ9NQ94 594 aaKnown RBP10.46□□□□□ -0.73
MMP28-205ENST00000615317 SH3GLB2Q9NR46 395 aa10.46□□□□□ -0.73
MMP28-205ENST00000615317 TMEM260Q9NX78 707 aa10.46□□□□□ -0.73
MMP28-205ENST00000615317 FRMPD3Q5JV73 1810 aa10.46□□□□□ -0.74
MMP28-205ENST00000615317 FAM205CA6NFA0 338 aa10.45□□□□□ -0.74
MMP28-205ENST00000615317 STX6O43752 255 aa10.45□□□□□ -0.74
MMP28-205ENST00000615317 SLC25A27O95847 323 aa10.45□□□□□ -0.74
MMP28-205ENST00000615317 PDCP20941 246 aa10.45□□□□□ -0.74
MMP28-205ENST00000615317 SYT1P21579 422 aa10.45□□□□□ -0.74
MMP28-205ENST00000615317 CTGFP29279 349 aa10.45□□□□□ -0.74
MMP28-205ENST00000615317 NR5A1Q13285 461 aa10.45□□□□□ -0.74
MMP28-205ENST00000615317 GNL2Q13823 731 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms